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Properties
| Property Name | Value |
|---|
| Product | Tic22-like protein |
| Orig transcript id | gnl|cribi|Naga_100011g29.3443.mrna |
| Orig protein id | gnl|cribi|Naga_100011g29.3443 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:104713..106535 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8216 ID=rna8216|Name=rna8216|organism=Nannochloropsis gaditana|type=mRNA|length=1811bp
CAACGTCCCCATTCCTTTGAGCATCAGAAAGTCGTCCAAAGAAGAGACAT
TACAAGGACGAGTGAGGAAACAATCTGGAATGCGCGTAAAGTCCAGCCTC
CACTCCTTGCTTCACGACCGAGAGCCTGTCCTCTGGCTGCTCCCTCCTCG
CGGCGTTCCACCCCCCTCCTAGCCAGCTCTTCCTCGAGATCATACCCTCC
CACAAGTGGTACCGAGAAGATGAAAAGCTAATCCTCCCATTATTTCTTTT
TTAAAGCCACATTACCCTTGAAGGTGACCGGTGGGGCATAGCGGGCGTAC
GCGTGTGCAAGATTTATACGGAGCTTTCTCGTGAAGTTGAAGACTGTTCG
TCAGCGTGAATGGCCCACATCCACATCGCAAGAAAAATGTTAGGATCAAG
GCGCCGCTCGGCTGCAAGAACGTTTGCCTGCTGTATTGTGGCTTTAGGAT
GCGTTGCGTGGTCGTCACATGCTGCATTTATATCTCCTCTGCACCACTTT
GGCTGTGGGCGCGCTCGAGGCCGGGTACATACCGCGGTCGTAGCGGAACG
TCCGTCAGTGCAGCCCACTCCGTCCATATACTCCGCCGCCACGGGCCACG
GGGAAGAGGAGTCCGAAGCACCACGGTTAAATTCAGACGTAGAAGGGAGA
AGGGGAAGTCCGCGAGAGCTAGAGCGGAAAAAGAAGCATTTCGACTTTCT
GAAGGAGGTCGGCAAAAACAAGAAGCAAGCCCGGGCCAACAAGGCTAGAT
TCCGAGACCAGCGAGACGAATACCTGGAGGAGATGCGCAAGGCATTCAAG
CTCATGCAGATAAAAGAGCGACAGGAGAGCGGCTTCAAATGGGTGAAGAG
GCCGAAGCGCGAGAGGCAGATCCCGCTGGGAGAGCTGGAGTTAGGCTCCC
GGCACGAGGGGGTGGTGATAACGGTGAAGGAGCACGGGGCCTACGTGGAC
TTCGGGGCGACGAAGGATGGCTTTGTGCGCCTGCGTGACTTGAGCGATCG
GGATTTCGTGCTGGACGCGCGCGACTACGTGAGGCCCGGGGACGCGGTCA
GCTTCTTCGTCAAGTACCTGAGTCCCGCCGAGGGCATCGTCACGGGGAGT
CTGGTGCCGGCCGAGGTGGAGACGGCGGAGGAGCAGGAGGCCCGCACGGG
CCTGGAGGAGGTGGAGGAGGACGACGAGCTGTGGGGCGAGGTGACCAAGG
TCTCAAACTACGGGGCATTCGTGGACGTGGGCGCGGAGGTGCAGGGCTTC
TTGCACGTGATCTACTATCCGAGGCGCAGCGAGGGGGCCCTCACACAGGA
CGTATTCTTCCCTGGCATGCGCCTGCGGGTCTGGGCCATGGAGGTGGACA
GGGACAGGCGCCGGCTCAAGCTGACGGGCGAGAGGCCCCGCTCTTTGCCG
CGCGTGGACTACTCCTGGTTCTTGGGGGGCTACGAGGTGGCGGGCTCAGA
GGCAGCCCCGGGGAGGGGTTTTGTGGAGGAAGAGTGGCGACGGCCGCTGT
ATGAGGAGGGGCAGGGCCTGCAACCGCGGGGCCGCGGGAAGCGGGCGATG
GAGAGGATCCGGGAATGGGGGTTTGAAACGGACGGGGGGCGGAAGAAGGA
GATGCTCCATGACTTGGACGCTGCCAGACGGCGGAAAGAGGAGGAGGAGG
CGGCGGCATCGGCGTCAGTGGAGGACAGAGTAGGCAAGCAGCCGTAGATT
AGAGGTATCGCTGGTGTGTGAAAGAAAGAAGAGCGTCGCCGTCATCGAAG
TCGGCCTCGGCGCCCTCCGCCTTTGCTAGCCATTGCTTTGAACCCTTCTC
CCTGAGCGACC back to topprotein sequence of rna8216 >rna8216-protein ID=rna8216-protein|Name=rna8216|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MIHALDRMARCRGSGASFMLLVLLLVEVLHGVCVLAFQPGSSGPFAHANG
VHHRRSTRCASEGDKGETRSACGREEGQTSRTVSAWGTLKTKLSFGVENM
GKLTFGTGAAIVAGFGAPQTVDVIKGVKEGRNDVGTALQRIVRPPSAEAF
SLKPFSRRTLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADA
EEMLQSMVQNPQTADARVLVMGLDKGLELVQSEPRRNGNHMLVFQFCPSV
QQLKNANGFRKVGWKAVLDKRPDKWRFGFNRQGVRNAGLPVFYCPDLRIA
KGREMVKPVFFSMEDLYYAWDRSTAGKHGAAPGEVKTLDFLRVVEWMLNE
PEQTRLVGFHASTQAQEYVEAQLRVKGGKARPIRAS back to topmRNA from alignment at KK037248.1:104713..106535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8216 ID=rna8216|Name=rna8216|organism=Nannochloropsis gaditana|type=mRNA|length=1823bp|location=Sequence derived from alignment at KK037248.1:104713..106535+ (Nannochloropsis gaditana)
TGGGAGGGTATGATCTCGAGGAAGAGCTGGCTAGGAGGGGGGTGGAAcgc
cgcgaggagggagcagccaGAGGACAGGCTCTCGGTCGTGAAGCAAGGAG
TGGAGGCTGGACTTTACGCGCATTCCAGATTGTTTCCTCACTCGTCCTTG
TAATGTCTCTTCTTTGGACGACTTTCTGATGCTCAAAGGAATGGGGACGT
TGCCGAGCCCGAGTGGGGCACCCAAGGATACCATTTAGCCTCCTTAGCCG
CTCATTTCTTGTTGCCCTACCATGTCTTCCTGCTGGTGATACAAAACCTT
GACATCCTGATTTTTTTTTATCTGGAACACCACATGATACATGCACTTGA
TAGGATGGCACGATGCAGGGGTTCTGGTGCCAGCTTTATGCTATTGGTTC
TCCTGTTAGTGGAGGTCCTGCATGGAGTCTGCGTCCTGGCTTTTCAGCCT
GGCAGCAGCGGTCCGTTCGCACACGCGAACGGAGTTCATCACCGTCGATC
AACCCGATGCGCTAGTGAAGGCGATAAAGGAGAGACAAGAAGTGCATGTg
gtagggaagaagggcaaacATCGCGCACAGTCTCGGCATGGGGTACTCTC
AAGACAAAGTTGAGCTTCGGGGTTGAAAATATGGGCAAGTTGACGTTTGG
GACCGGAGCTGCCATTGTGGCAGGGTTTGGAGCTCCGCAAACAGTGGACG
TCATAAAAGGTTGGTATTTATTTATCCAAAGCTCCAGGCATGAGGTTCAG
ACAGTGTTTGCTGTGCGGTGGTTCTCGGGATGGTGGGCTGCGCTTGTGCA
AGTCGTCctcacgctcctcctccatccatgCTGACACGATCAGGCGTAAA
AGAGGGTCGGAATGACGTAGGTACAGCGTTGCAAAGAATagtccgccccc
cctccgccgaggCTTTCAGCCTGAAGCCCTTCTCTCGGCGGACTCtgaag
gagaagctggcCTCGGTGCCTTGCTTCCTGGTGTGCAACCAGCAGGGTTC
GCCCTACCTGGTGCCCCTGGAGACGGGCTTCGACGTAGGGGTGGTCTTCT
TGGACCcggcggacgcggaggaaATGCTGCAGAGCATGGTGCAGAACCCG
CAGACGGCGGACGCGCGCGTGCTGGTGATGGGCCTGGACAAGGGCTTGGA
GCTGGTCCAGAGCGAGCCCCGCAGGAACGGGAACCACATGCTCGTCTTCC
AGTTCTGTCCGAGCGTGCAGCAGCTGAAAAATGCCAACGGCTTCCGCAAG
GTGGGCTGGAAGGCGGTGCTGGACAAGCGCCCGGACAAGTGGCGCTTCGG
CTTTAATCGGCAGGGGGTGCGGAACGCGGGGCTCCCCGTCTTTTACTGCC
CTGACCTGCGGATCGCGAAGGGCCGCGAGATGGTCAAACCAGTCTTTTTC
TCCATGGAGGACCTGTACTACGCCTGGGACAGGAGCACGGCCGGCAAGCA
CGGGGCGGCCCccggggaggtgaagacTCTGGACTTTCTCCGTGTCGTGG
AGTGGATGCTCAATGAGCCCGAGCAGACGCGTCTGGTTGGCTTCCACGCC
AGCACTCAGGCGCAGGAGTACGTGGAGGCGCAGCTCCGGGTCAAGGGCGG
AAAGGCAAGGCCAATAAGGGCgagctgaggagggaggaggggaaggaggg
ggagccgCGTGGTGAGGAGCAgggggcaaggcgggagagggattgAAATT
TCGTAGGCACTCAGCGAGGCTCATAGAGAGCGCAAAAGAAAATTAAATGC
ACCAGCGATCTGCGCGCTCTTGTTGCCCGAGGAACCCATCCACGAATAGA
AGTAATATAATAATATAATATTC back to topCoding sequence (CDS) from alignment at KK037248.1:104713..106535+ >rna8216 ID=rna8216|Name=rna8216|organism=Nannochloropsis gaditana|type=CDS|length=2322bp|location=Sequence derived from alignment at KK037248.1:104713..106535+ (Nannochloropsis gaditana)
ATGATACATGCACTTGATAGGATGGCACGATGCAGGGGTTCTGGTGCCAG
CTTTATGCTATTGGTTCTCCTGTTAGTGGAGGTCCTGCATGGAGTCTGCG
TCCTGGCTTTTCAGCCTGGCAGCAGCGGTCCGTTCGCACACGCGAACGGA
GTTCATCACCGTCGATCAACCCGATGCGCTAGTGAAGGCGATAAAGGAGA
GACAAGAAGTGCATGTggtagggaagaagggcaaacATCGCGCACAGTCT
CGGCATGGGGTACTCTCAAGACAAAGTTGAGCTTCGGGGTTGAAAATATG
GGCAAGTTGACGTTTGGGACCGGAGCTGCCATTGTGGCAGGGTTTGGAGC
TCCGCAAACAGTGGACGTCATAAAAGGCGTAAAAGAGGGTCGGAATGACG
TAGGTACAGCGTTGCAAAGAATagtccgccccccctccgccgaggCTTTC
AGCCTGAAGCCCTTCTCTCGGCGGACTCtgaaggagaagctggcCTCGGT
GCCTTGCTTCCTGGTGTGCAACCAGCAGGGTTCGCCCTACCTGGTGCCCC
TGGAGACGGGCTTCGACGTAGGGGTGGTCTTCTTGGACCcggcggacgcg
gaggaaATGCTGCAGAGCATGGTGCAGAACCCGCAGACGGCGGACGCGCG
CGTGCTGGTGATGGGCCTGGACAAGGGCTTGGAGCTGGTCCAGAGCGAGC
CCCGCAGGAACGGGAACCACATGCTCGTCTTCCAGTTCTGTCCGAGCGTG
CAGCAGCTGAAAAATGCCAACGGCTTCCGCAAGGTGGGCTGGAAGGCGGT
GCTGGACAAGCGCCCGGACAAGTGGCGCTTCGGCTTTAATCGGCAGGGGG
TGCGGAACGCGGGGCTCCCCGTCTTTTACTGCCCTGACCTGCGGATCGCG
AAGGGCCGCGAGATGGTCAAACCAGTCTTTTTCTCCATGGAGGACCTGTA
CTACGCCTGGGACAGGAGCACGGCCGGCAAGCACGGGGCGGCCCccgggg
aggtgaagacTCTGGACTTTCTCCGTGTCGTGGAGTGGATGCTCAATGAG
CCCGAGCAGACGCGTCTGGTTGGCTTCCACGCCAGCACTCAGGCGCAGGA
GTACGTGGAGGCGCAGCTCCGGGTCAAGGGCGGAAAGGCAAGGCCAATAA
GGGCgagctgaATGATACATGCACTTGATAGGATGGCACGATGCAGGGGT
TCTGGTGCCAGCTTTATGCTATTGGTTCTCCTGTTAGTGGAGGTCCTGCA
TGGAGTCTGCGTCCTGGCTTTTCAGCCTGGCAGCAGCGGTCCGTTCGCAC
ACGCGAACGGAGTTCATCACCGTCGATCAACCCGATGCGCTAGTGAAGGC
GATAAAGGAGAGACAAGAAGTGCATGTggtagggaagaagggcaaacATC
GCGCACAGTCTCGGCATGGGGTACTCTCAAGACAAAGTTGAGCTTCGGGG
TTGAAAATATGGGCAAGTTGACGTTTGGGACCGGAGCTGCCATTGTGGCA
GGGTTTGGAGCTCCGCAAACAGTGGACGTCATAAAAGGCGTAAAAGAGGG
TCGGAATGACGTAGGTACAGCGTTGCAAAGAATagtccgccccccctccg
ccgaggCTTTCAGCCTGAAGCCCTTCTCTCGGCGGACTCtgaaggagaag
ctggcCTCGGTGCCTTGCTTCCTGGTGTGCAACCAGCAGGGTTCGCCCTA
CCTGGTGCCCCTGGAGACGGGCTTCGACGTAGGGGTGGTCTTCTTGGACC
cggcggacgcggaggaaATGCTGCAGAGCATGGTGCAGAACCCGCAGACG
GCGGACGCGCGCGTGCTGGTGATGGGCCTGGACAAGGGCTTGGAGCTGGT
CCAGAGCGAGCCCCGCAGGAACGGGAACCACATGCTCGTCTTCCAGTTCT
GTCCGAGCGTGCAGCAGCTGAAAAATGCCAACGGCTTCCGCAAGGTGGGC
TGGAAGGCGGTGCTGGACAAGCGCCCGGACAAGTGGCGCTTCGGCTTTAA
TCGGCAGGGGGTGCGGAACGCGGGGCTCCCCGTCTTTTACTGCCCTGACC
TGCGGATCGCGAAGGGCCGCGAGATGGTCAAACCAGTCTTTTTCTCCATG
GAGGACCTGTACTACGCCTGGGACAGGAGCACGGCCGGCAAGCACGGGGC
GGCCCccggggaggtgaagacTCTGGACTTTCTCCGTGTCGTGGAGTGGA
TGCTCAATGAGCCCGAGCAGACGCGTCTGGTTGGCTTCCACGCCAGCACT
CAGGCGCAGGAGTACGTGGAGGCGCAGCTCCGGGTCAAGGGCGGAAAGGC
AAGGCCAATAAGGGCgagctga back to top
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