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Properties
| Property Name | Value |
|---|
| Product | mannosyl-oligosaccharide -alpha-mannosidase |
| Orig transcript id | gnl|cribi|Naga_100011g24.3446.mrna |
| Orig protein id | gnl|cribi|Naga_100011g24.3446 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:95255..98130 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8211 ID=rna8211|Name=rna8211|organism=Nannochloropsis gaditana|type=mRNA|length=1717bp
ATGGCTGTTGGAATGAACGACGTGTGATGAAATTCGTGTTCCCCCTTAAT
TGTCTTTGCACTTTGCTTTCTCGCTTGCATCGCTTCTTCGCGCTTAGGAA
GTCTTCGAAGCCCATCTATCACAGCGTTTCGTTTCGCTTTTTCAAACGGA
TGTCTGAAGAACATCGATCCGATTCGCGTTGATGAGTGTTTCCGGTCCTC
TACATATCCCTTTCCGCAGGGAGCTGTCAAACTGTGCATATTTGCGGGGA
GGGACAGATATGGCCACTGCCAAGGTCATGAGCAGCCGGCCCACGGGCCC
AACTACTTCAGGGGAGGACAAGGGCGTCCGGTCGTACTATCTGAGTAAGA
TCGATGAGCTGGAGGTGGTAGTTAGAGAGAGGACACAGAATTTGCAACGA
TTAAAGGCGCAACGGAATGAGTGGAATGCGAAGGTGAGGTTGTTGCGGGA
AGAGCTGCATCACTTGCAAGAGCCGGGCTCCTACGTAGGGGAGGTCGTGA
AAGCCATGGGGAAGACCAAGGTCCTGGTCAAGGTCAATCCTGAAGGAAAA
TACGTGGTGGATCTGGACAAGGATGTGGACATTACCAAGTGCACGCCCAA
CACCCGCGTCGCGCTGCGCAACGATTCGTACACACTCCACAAGATCCTCC
CCACCAAAGTCGACCCGCTGGTCTCCCTTATGAAGGTGGAGGCGGTGCCA
GACTCTACCTACGACATGATTGGTGGGCTGGACAAGCAGGTCCGCGAAAT
CAAGGAGGTCATTGAGCTGCCCATCAAGCATCCGGAGCTGTTCGAGGCTT
TGGGCGTAGCTCAGCCTAAGGGGGTGCTTCTGTACGGCCCACCCGGGACA
GGGAAGACTCTGCTGGCTCGAGCCGTGGCGCACCACACGGACTGCACCTT
TATCCGGGTATCGGGGGCGGAGTTGGTGCAGAAGTATATCGGAGAAGGCT
CGCGCATGGTGCGGGAGCTCTTCGTGATGGCCCGGGAGGCGGCGCCCTCC
ATCATCTTCATGGACGAGATCGACTCCATCGGTTCCTCGCGCGTGGATGG
AAGCGAGGGTGGGGACTCGGAGGTACAGCGGACCATGCTTGAGCTCTTGA
ATCAACTCGACGGCTTCGAGCCAGCGCAAAATATCAAGGTAGTGATGGCC
ACGAACCGCATCGACATCCTGGACGCCGCCCTCCTTCGCCCCGGGCGCAT
CGATCGTAAGATCGAGTTTCCCCACCCAACCATGGCGTCTCGTCTAGACA
TTTTGACCATTCATAGCCGAAAGATGAATCTCATGCGTGGCATCAATTTG
AAGAGCATTGCGGAGAAGCTGCCGAACGCTTCGGGAGCGGAGTGCAAGGC
TGTCTGCACAGAGGCGGGAATGTTCGCCCTCCGAGAGAGGCGAATCCACG
TGACTCAGGAGGACTTTGAAATGGCTGTGGCAAAGGTGATGAAGAAGGAT
AGCGACTCGAACATGTCTATTAGGAAACTCTGGAAGTAAATAAGTCAAAC
GGAAAGGGTTGGAAACAAGGAGCACGATTGACCAGAATCGAGGATTACAC
GCGTCCTGTACTTGCAAGGCTTATGGCGTGAAATTTCGCTTGCGAAGGAA
TAAAATGACGAGCAGGGGACAGGTATAATTTACGAAATCGGTTAATTAAG
TAATGTTATAGCCCACACACTTTGTCACGAGACCGCGAGTAGACTTTGGA
AAAAAACATACTCATCA back to topprotein sequence of rna8211 >rna8211-protein ID=rna8211-protein|Name=rna8211|organism=Nannochloropsis gaditana|type=polypeptide|length=768bp
MLRSSRGYRHFEKSSSIDRTSKRLGVVIYLSFALLLGALPWLLWPGTAPH
GDRTGPGNMLLFAVAENSPDSNTATFHGAEPAAAEHKSATLSTQAEDLRD
PLIDAERIRENDEGKDKMGETEETQNQNDEKAGKEGGVKVAAEKVAAPAT
EEELEKIVQDVEENEMNSSKNKKGEEKLPAAELNGDVIGVPDAKKLEKGT
KGYKKSIAATLKTEAEKKRKPQENRPDQTEADAEKDTRDQVIVKIANKET
GKVLATSVRKADKDPFVRLAPQDPHIDKTLAKERRMRVKTAMKRAWNAYH
AHAWGKDTILPISLTSANRWGGMAMTMLDSLSTLWVMGLKEEFEQARDWI
AENLSFKSVGHISVFETNIRALGGLLSAFDLSRDKVFLEKAAELADMLLP
AFDSPTGFPINGLILSAGLPSGSHQACLAEFGTVQLEFRYLSHATGNPIY
AKKAMHVYERMHEESADVAEKGLFRLDFNSDTGAWGGKHYSVGARGDSFY
EYLLKTWLQGNKKETWLREMFDESVDGAEELLIARGPGGRLYIANNDNGM
QAKRMEHLACFYPGTLALGAATLETKGDAVLEKRATHYMDLARELGETCY
QFAGSQMTGLAPDSVVFDQDGVPQASDPRYILRPEVAESMYYLHLLDGDP
KWREYGAKLFEAIDFYCRTNEAYAQVRLSSGPSGRRSVALRGAERKPSDV
GGEGASQAEQSGKAKDMGLVTQEDDMESFFLAETLKYLYLIQETEPGEVD
LSRQVFNTEAHPLHIFDE back to topmRNA from alignment at KK037248.1:95255..98130- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8211 ID=rna8211|Name=rna8211|organism=Nannochloropsis gaditana|type=mRNA|length=2876bp|location=Sequence derived from alignment at KK037248.1:95255..98130- (Nannochloropsis gaditana)
AAAGACAGACTGTGACCAGCCATCCAGAAAGTGCGAGCAACCGACTCCTA
CCATTTGCCGCCGAACTTCCGCGACAGGCCATATCTTGAGCGTTTCTCCA
GTCAATTCGATTGTATATTCTATACTTGTCACAAGGGCATCAAACTAGCT
ATGCTAAGGTCATCAAGAGGTTATAGACATTTTGAAAAATGTAAGTACCC
AGTTAGATCCTGGTTCCTTACCGTCAGTCCGATGAGTGAACTTTACTTCC
GATCATTTTCACGGGATGGCTTGGTAGATTTCATTTGATATTCCGTCCTA
TCACGCACAGCATCATCGATTGATCGCACCTCAAAACGGTTAGGTGTGGT
CATATACCTCTCTTTCGCGTTGCTCTTAGGAGCTTTACCGTGGCTTCTGT
GGCCTGGCACTGCTCCTCATGGGGATCGCACCGGACCAGGAAACATGCTG
CTATTCGCAGTAGCTGAAAATAGTCCTGACTCAAATACAGCCACTTTTCA
TGGCGCAGAGCCTGCAGCAGCGGAGCATAAATCCGCGACTTTAAGCACCC
AAGCCGAGGACTTGAGGGATCCATTGATTGACGCTGAAAGAATTAGGGAG
AATGACGAAGGAAAGGATAAAATGGGAGAAACTGAGGAAACCCAGAACCA
AAATGACGAAAAAGCTGGAAAGGAAGGAGGCGTCAAAGTAGCCGCTGAGA
AGGTTGCCGCACCCGCAACCGAGGAGGAATTAGAAAAAATCGTCCAAGAT
GTTGAGGAAAATGAAATGAATTCAAGCAAAAACAAGAAGGGTGAAGAAAA
ACTACCCGCTGCCGAACTCAACGGTGACGTGATAGGTGTTCCTGACGCCA
AGAAATTGGAAAAAGGGACAAAGGGATATAAGAAATCGATAGCAGCGACC
CTCAAAACAGAAGCTGAAAAAAAGAGAAAGCCCCAAGAGAACCGTCCAGA
CCAAACTGAAGCCGATGCCGAGAAGGATACCAGGGATCAAGTGATTGTTA
AAATAGCCAATAAAGAAACGGGTAAGGTGTTGGCAACTTCTGTCCGAAAG
GCCGACAAGGACCCCTTTGTGCGCCTTGCACCTCAAGACCCGCACATCGA
CAAAACCCTGGCCAAGGAACGCCGTATGCGCGTGAAGACGGCGATGAAAC
GAGCTTGGAATGCGTACCACGCCCACGCCTGGGGAAAGGACACGATTCTA
CCCATCTCCCTCACATCGGCGAACAGGTGGGGCGGTATGGCCATGACGAT
GCTTGACTCGCTTTCTACCCTGTGGGTGATGGGCCTGAAAGAGGAGTTCG
AGCAAGCGCGGGACTGGATCGCAGAAAACCTCAGCTTCAAAAGCGTGGGC
CACATCTCGGTCTTCGAGACGAATATTCGGGCTTTGGGCGGCCTCCTGTC
CGCCTTCGACCTGTCCAGGGACAAGGTCTTCCTGGAGAAGGCCGCGGAGC
TCGCGGATATGCTCCTCCCAGCTTTTGACTCTCCCACCGGATTCCCGATC
AACGGGCTCATCCTCTCCGCAGGCTTGCCCAGCGGCAGCCACCAGGCCTG
CTTGGCCGAGTTCGGTACCGTGCAGCTCGAATTTAGGTACCTGAGCCACG
CGACGGGAAATCCCATCTACGCGAAGAAGGCCATGCACGTCTATGAAAGG
ATGCACGAGGAGAGCGCTGACGTGGCTGAAAAAGGGCTTTTCAGGCTGGA
CTTCAACTCGGACACCGGCGCCTGGGGTGGGAAACACTACTCGGTGGGCG
CGCGTGGTGACTCCTTCTATGAGTACCTCCTCAAGACGTGGCTGCAGGGC
AACAAGAAGGAAACATGGCTTCGGGAGATGTTTGACGAGTCGGTGGACGG
CGCGGAGGAGCTCTTGATCGCCAGAGGCCCAGGGGGCAGACTTTACATCG
CCAACAATGATAACGGGATGCAAGCCAAGCGCATGGAGCACCTCGCCTGC
TTCTACCCTGGCACTCTCGCACTGGGGGCCGCGACCCTGGAGACGAAAGG
CGACGCGGTCCTCGAAAAGCGGGCCACTCACTACATGGACCTGGCGCGGG
AGCTCGGAGAAACCTGCTACCAGTTTGCAGGCTCACAAATGACGGGCCTG
GCGCCCGATTCGGTGGTTTTCGACCAGGACGGCGTGCCGCAAGCCTCGGA
CCCGCGATACATCCTGCGGCCGGAGGTCGCCGAGTCCATGTACTACCTGC
ATCTGCTGGACGGGGACCCGAAGTGGCGCGAGTATGGCGCCAAGCTGTTC
GAGGCCATCGACTTCTACTGCCGCACGAACGAGGCGTATGCTCAGGTCCG
GCTCTCAAGCGGGCCGTCGGGCAGGCGGAGCGTGGCTTTGCGGGGGGCGG
AGAGGAAGCCTTCCGATGTAGGCGGGGAAGGAGCGTCGCAGGCCGAGCAG
TCGGGGAAGGCGAAGGACATGGGGCTGGTGACTCAGGAGGACGACATGGA
GTCATTCTTTCTGGCGGAGACCCTCAAGTACCTGTACCTCATCCAAGAGA
CAGAGCCGGGGGAGGTGGATCTGTCGCGTCAGGTCTTCAACACTGAGGCT
CACCCTCTCCACATATTCGACGAATAGGGGCATAGGGATAGAAGTTGATT
GCGGGATGACGGGTCGTCCAGAGATATAGGACTTTAAATGATGAGTATGT
TTTTTTCCAAAGTCTACTCGCGGTCTCGTGACAAAGTGTGTGGGCTATAA
CATTACTTAATTAACCGATTTCGTAAATTATACCTGTCCCCTGCTCGTCA
TTTTATTCCTTCGCAAGCGAAATTTCACGCCATAAGCCTTGCAAGTACAG
GACGCGTGTAATCCTCGATTCTGGTCAATCGTGCTCCTTGTTTCCAACCC
TTTCCGTTTGACTTATTTACTTCCAG back to topCoding sequence (CDS) from alignment at KK037248.1:95255..98130- >rna8211 ID=rna8211|Name=rna8211|organism=Nannochloropsis gaditana|type=CDS|length=4614bp|location=Sequence derived from alignment at KK037248.1:95255..98130- (Nannochloropsis gaditana)
CATCATCGATTGATCGCACCTCAAAACGGTTAGGTGTGGTCATATACCTC
TCTTTCGCGTTGCTCTTAGGAGCTTTACCGTGGCTTCTGTGGCCTGGCAC
TGCTCCTCATGGGGATCGCACCGGACCAGGAAACATGCTGCTATTCGCAG
TAGCTGAAAATAGTCCTGACTCAAATACAGCCACTTTTCATGGCGCAGAG
CCTGCAGCAGCGGAGCATAAATCCGCGACTTTAAGCACCCAAGCCGAGGA
CTTGAGGGATCCATTGATTGACGCTGAAAGAATTAGGGAGAATGACGAAG
GAAAGGATAAAATGGGAGAAACTGAGGAAACCCAGAACCAAAATGACGAA
AAAGCTGGAAAGGAAGGAGGCGTCAAAGTAGCCGCTGAGAAGGTTGCCGC
ACCCGCAACCGAGGAGGAATTAGAAAAAATCGTCCAAGATGTTGAGGAAA
ATGAAATGAATTCAAGCAAAAACAAGAAGGGTGAAGAAAAACTACCCGCT
GCCGAACTCAACGGTGACGTGATAGGTGTTCCTGACGCCAAGAAATTGGA
AAAAGGGACAAAGGGATATAAGAAATCGATAGCAGCGACCCTCAAAACAG
AAGCTGAAAAAAAGAGAAAGCCCCAAGAGAACCGTCCAGACCAAACTGAA
GCCGATGCCGAGAAGGATACCAGGGATCAAGTGATTGTTAAAATAGCCAA
TAAAGAAACGGGTAAGGTGTTGGCAACTTCTGTCCGAAAGGCCGACAAGG
ACCCCTTTGTGCGCCTTGCACCTCAAGACCCGCACATCGACAAAACCCTG
GCCAAGGAACGCCGTATGCGCGTGAAGACGGCGATGAAACGAGCTTGGAA
TGCGTACCACGCCCACGCCTGGGGAAAGGACACGATTCTACCCATCTCCC
TCACATCGGCGAACAGGTGGGGCGGTATGGCCATGACGATGCTTGACTCG
CTTTCTACCCTGTGGGTGATGGGCCTGAAAGAGGAGTTCGAGCAAGCGCG
GGACTGGATCGCAGAAAACCTCAGCTTCAAAAGCGTGGGCCACATCTCGG
TCTTCGAGACGAATATTCGGGCTTTGGGCGGCCTCCTGTCCGCCTTCGAC
CTGTCCAGGGACAAGGTCTTCCTGGAGAAGGCCGCGGAGCTCGCGGATAT
GCTCCTCCCAGCTTTTGACTCTCCCACCGGATTCCCGATCAACGGGCTCA
TCCTCTCCGCAGGCTTGCCCAGCGGCAGCCACCAGGCCTGCTTGGCCGAG
TTCGGTACCGTGCAGCTCGAATTTAGGTACCTGAGCCACGCGACGGGAAA
TCCCATCTACGCGAAGAAGGCCATGCACGTCTATGAAAGGATGCACGAGG
AGAGCGCTGACGTGGCTGAAAAAGGGCTTTTCAGGCTGGACTTCAACTCG
GACACCGGCGCCTGGGGTGGGAAACACTACTCGGTGGGCGCGCGTGGTGA
CTCCTTCTATGAGTACCTCCTCAAGACGTGGCTGCAGGGCAACAAGAAGG
AAACATGGCTTCGGGAGATGTTTGACGAGTCGGTGGACGGCGCGGAGGAG
CTCTTGATCGCCAGAGGCCCAGGGGGCAGACTTTACATCGCCAACAATGA
TAACGGGATGCAAGCCAAGCGCATGGAGCACCTCGCCTGCTTCTACCCTG
GCACTCTCGCACTGGGGGCCGCGACCCTGGAGACGAAAGGCGACGCGGTC
CTCGAAAAGCGGGCCACTCACTACATGGACCTGGCGCGGGAGCTCGGAGA
AACCTGCTACCAGTTTGCAGGCTCACAAATGACGGGCCTGGCGCCCGATT
CGGTGGTTTTCGACCAGGACGGCGTGCCGCAAGCCTCGGACCCGCGATAC
ATCCTGCGGCCGGAGGTCGCCGAGTCCATGTACTACCTGCATCTGCTGGA
CGGGGACCCGAAGTGGCGCGAGTATGGCGCCAAGCTGTTCGAGGCCATCG
ACTTCTACTGCCGCACGAACGAGGCGTATGCTCAGGTCCGGCTCTCAAGC
GGGCCGTCGGGCAGGCGGAGCGTGGCTTTGCGGGGGGCGGAGAGGAAGCC
TTCCGATGTAGGCGGGGAAGGAGCGTCGCAGGCCGAGCAGTCGGGGAAGG
CGAAGGACATGGGGCTGGTGACTCAGGAGGACGACATGGAGTCATTCTTT
CTGGCGGAGACCCTCAAGTACCTGTACCTCATCCAAGAGACAGAGCCGGG
GGAGGTGGATCTGTCGCGTCAGGTCTTCAACACTGAGGCTCACCCTCTCC
ACATATTCGACGAATAGATGCTAAGGTCATCAAGAGGTTATAGACATTTT
GAAAAATCATCATCGATTGATCGCACCTCAAAACGGTTAGGTGTGGTCAT
ATACCTCTCTTTCGCGTTGCTCTTAGGAGCTTTACCGTGGCTTCTGTGGC
CTGGCACTGCTCCTCATGGGGATCGCACCGGACCAGGAAACATGCTGCTA
TTCGCAGTAGCTGAAAATAGTCCTGACTCAAATACAGCCACTTTTCATGG
CGCAGAGCCTGCAGCAGCGGAGCATAAATCCGCGACTTTAAGCACCCAAG
CCGAGGACTTGAGGGATCCATTGATTGACGCTGAAAGAATTAGGGAGAAT
GACGAAGGAAAGGATAAAATGGGAGAAACTGAGGAAACCCAGAACCAAAA
TGACGAAAAAGCTGGAAAGGAAGGAGGCGTCAAAGTAGCCGCTGAGAAGG
TTGCCGCACCCGCAACCGAGGAGGAATTAGAAAAAATCGTCCAAGATGTT
GAGGAAAATGAAATGAATTCAAGCAAAAACAAGAAGGGTGAAGAAAAACT
ACCCGCTGCCGAACTCAACGGTGACGTGATAGGTGTTCCTGACGCCAAGA
AATTGGAAAAAGGGACAAAGGGATATAAGAAATCGATAGCAGCGACCCTC
AAAACAGAAGCTGAAAAAAAGAGAAAGCCCCAAGAGAACCGTCCAGACCA
AACTGAAGCCGATGCCGAGAAGGATACCAGGGATCAAGTGATTGTTAAAA
TAGCCAATAAAGAAACGGGTAAGGTGTTGGCAACTTCTGTCCGAAAGGCC
GACAAGGACCCCTTTGTGCGCCTTGCACCTCAAGACCCGCACATCGACAA
AACCCTGGCCAAGGAACGCCGTATGCGCGTGAAGACGGCGATGAAACGAG
CTTGGAATGCGTACCACGCCCACGCCTGGGGAAAGGACACGATTCTACCC
ATCTCCCTCACATCGGCGAACAGGTGGGGCGGTATGGCCATGACGATGCT
TGACTCGCTTTCTACCCTGTGGGTGATGGGCCTGAAAGAGGAGTTCGAGC
AAGCGCGGGACTGGATCGCAGAAAACCTCAGCTTCAAAAGCGTGGGCCAC
ATCTCGGTCTTCGAGACGAATATTCGGGCTTTGGGCGGCCTCCTGTCCGC
CTTCGACCTGTCCAGGGACAAGGTCTTCCTGGAGAAGGCCGCGGAGCTCG
CGGATATGCTCCTCCCAGCTTTTGACTCTCCCACCGGATTCCCGATCAAC
GGGCTCATCCTCTCCGCAGGCTTGCCCAGCGGCAGCCACCAGGCCTGCTT
GGCCGAGTTCGGTACCGTGCAGCTCGAATTTAGGTACCTGAGCCACGCGA
CGGGAAATCCCATCTACGCGAAGAAGGCCATGCACGTCTATGAAAGGATG
CACGAGGAGAGCGCTGACGTGGCTGAAAAAGGGCTTTTCAGGCTGGACTT
CAACTCGGACACCGGCGCCTGGGGTGGGAAACACTACTCGGTGGGCGCGC
GTGGTGACTCCTTCTATGAGTACCTCCTCAAGACGTGGCTGCAGGGCAAC
AAGAAGGAAACATGGCTTCGGGAGATGTTTGACGAGTCGGTGGACGGCGC
GGAGGAGCTCTTGATCGCCAGAGGCCCAGGGGGCAGACTTTACATCGCCA
ACAATGATAACGGGATGCAAGCCAAGCGCATGGAGCACCTCGCCTGCTTC
TACCCTGGCACTCTCGCACTGGGGGCCGCGACCCTGGAGACGAAAGGCGA
CGCGGTCCTCGAAAAGCGGGCCACTCACTACATGGACCTGGCGCGGGAGC
TCGGAGAAACCTGCTACCAGTTTGCAGGCTCACAAATGACGGGCCTGGCG
CCCGATTCGGTGGTTTTCGACCAGGACGGCGTGCCGCAAGCCTCGGACCC
GCGATACATCCTGCGGCCGGAGGTCGCCGAGTCCATGTACTACCTGCATC
TGCTGGACGGGGACCCGAAGTGGCGCGAGTATGGCGCCAAGCTGTTCGAG
GCCATCGACTTCTACTGCCGCACGAACGAGGCGTATGCTCAGGTCCGGCT
CTCAAGCGGGCCGTCGGGCAGGCGGAGCGTGGCTTTGCGGGGGGCGGAGA
GGAAGCCTTCCGATGTAGGCGGGGAAGGAGCGTCGCAGGCCGAGCAGTCG
GGGAAGGCGAAGGACATGGGGCTGGTGACTCAGGAGGACGACATGGAGTC
ATTCTTTCTGGCGGAGACCCTCAAGTACCTGTACCTCATCCAAGAGACAG
AGCCGGGGGAGGTGGATCTGTCGCGTCAGGTCTTCAACACTGAGGCTCAC
CCTCTCCACATATTCGACGAATAGATGCTAAGGTCATCAAGAGGTTATAG
ACATTTTGAAAAAT back to top
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