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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF3007 |
| Orig transcript id | gnl|cribi|Naga_100011g5.3472.mrna |
| Orig protein id | gnl|cribi|Naga_100011g5.3472 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:57164..58478 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8192 ID=rna8192|Name=rna8192|organism=Nannochloropsis gaditana|type=mRNA|length=2712bp
TGTTCTTGATACGCCTGACATTGAGGTCACTCTTCCGGTCCTGCCTTCTG
CTCCGCTATTCTGATTCTGAACTGCGGTTGTCATGCGGACCGCTGCAGTT
GCCTTGTGGGATTGCACGAGTGATTCTAAGTGGCATGGCAATCGAATTGG
ATGAAAATTCATTTCGTAGCTTGTCTCGATGTTTGTGCTGAGAAGAGAAC
TTTTCCGGCTAGCTTGTCGATCCACGAGGGGATAGCCGACAGGCGGGAGG
CCAAGGACATTCATGATTTACCCCTTAGTCATCGTAGAGCGCGCATTTGC
AATTTAAAAACGAATCATGGCGTGAGATAATGTGTTGAAAAATAATTATG
CCATCAATCTGTCTTTTCTCTGACGTTCGTGAAAAGAGCAAAGAACACAC
GTACGCGTTCCGATGGCAGCTGGGCATGGGGTACGTAGACTTACAAAGCC
CTCACATGGATGCTTTCTTTTCGTCTCGCATACAAATAGGCGGATACGAC
GTCCAGTATAAGATCCAGACATTATATGTCATACCTTGTGTCCGACATTT
GGTGCCTGGCCTCAAAGAGGTGCCTTCTCCTTGCTCTTCTGTCGGTAGTC
TCGTTCCCAACATGTGCGGACGCTGCCGCACCCCCCTCGAGACAGTCCCG
CGAGCTAATTGGCAAAGATGCAGCCATCAGCAAAGCCGCATGCTTCGGCT
CTTACCCAAGGCAACTCGTCGTACGGAAGCTTCAGCCAGGTCAATTAATT
ACCGCGGATGGCCAACTGGATGAAGAGGCTTGGGCGGAGACTCCTTGGAG
TGCTCCTTTTGAGGACATAGAAGGAGACCTGGGACCTCCTCCGCAATTTG
AAACGAAAGTGAAGATGCGCTACGACGATGACTGTCTGTGGGTGGCGGCG
TACATGGAAGAGCCACAGGCATGGGCGACGCAGCAAGAGACCAATAGCAT
CGTGTATTTAGACAACGATTTCGAAGTATTTGTAGATCCGAATGGAGATA
ACCACTACTACAAAGAGGTGGAGATCAACGCGCACGGCGCCAGCTGGAAC
CTCCTCCTCGTCCAACCCTACGTGGACGGCGGCCCCGCTGTCTGCAATGG
CACGCTCGCCACCATGTGCGCCTCCAACTACTCCTCGCCCTCGTCCTCGT
CCTCGTCCTCCCCCGGCCCCTCGGTCCCCGCCTGGGACCTCTCCTCCTCC
CTGAAGGCGGGGGTCTCGGTGGACGGGGCACTGAACGACCCGGCCGTCGG
GAGCAAGGGCTGGAGTGCGGAAATGTGCCTGCCGCTGAAGGAATACGTCA
AGTACGAGGAGGGGGTGAATCTGCCGCCCCGCCGGGGTGACTACTGGCGG
ATCAACTTCTCCAGAGTCCAATGGACGGTGAAGGTGGCGAGGGAGGGCGG
AAGCGAGGTGTATGTCAAGGACGAGGAAGCGCCCGCTTCGAATTGGGTCT
TCCAACCCATGGGGGTGACCAACATGCACTTGCCAGAGCGGTGGGGCTAC
GCGTATTTCTCGGAGGAGCCAGCCAAGGGCGGGAGGCAGGGAGGGAGGGA
GGACGTGATAGAGGAAGGCCCTCGCGATCCGAAGTGGCCAATGCGGGAGG
CGTTGGCGCAGGTGTACGAGGCACAGAAGGTGTACACGACCCTCTACGGC
GGGGGGGTCTCCTACACAGACAGCGTGAACGCGCTGGTGTTGAATGGGCA
CTTGTCCACGCACGTGGCGCAAGGCTTCTGCGCGGGGATTCCGGAGATGG
AGAAGACGGGGGGGAAGCGGGGGCGCTCAAGGAGGTTTCGTCGCCTCAGT
TCGCAGCGCGGATATGGCTGGGGTGATGGGTCACGTGGATGAGACCCGGC
GGATGTGGTTCACGGGGGAGGATGGAGCGGGGCGGGGGAAGGAAGGCGAG
TCTCCGGATCGGGAGGTGCCCCTCCAACGCCCGCATGAGCAGCCGGCGGT
GAGTAAAGGAACGGGGTCAGGTCGCAGACGGGGAATGCTGCGGGTGTAGG
GTAGCCGGCAGGGAAGGCGACGGCTTTTGTGTTGGAAACCGTGTTGTGCG
TGTAGGGGGTCTCAGAAGGGCAGAGTGCAAGTGTAACATAGCACCACGCA
GCATTAGAGCGGCATGTACCATGGGAGTCAGCCACGCAGTGAACGCGTCC
TTATGAAAAGTCAGAGCGATAATGCGCACAAAGGAAAGTAGCAGCGAACG
AACAAAAGTCCAGAGGCGGGGAGGAGCTGGCGTCAGGGGACGTCAAGCAC
AGGAATAGTTGCCGAAACGGCAGTGCTGTAAACCAAACGCTGAATAGATT
AGAAGCAGTCAAGGTCTCGGAAAACGGTGGAAGACTTTGCTACGCATGAA
GAAGATGTTGGTGCCGACTCCTAGGTCGACCAGATTTTGTCTCTCGGAGG
GTGTACTCGCAGAATATCAGGAGTAAAGGAGGAAAGTGCTGGATGTGAAG
CGACGGTCGTGCCGTGGAGCACACAACTACTGATTACGAGCGTGACAAAC
GACGACGTCGTAAGGGATGGAGGATTTGCAATCGCATGGAACGGACAGGA
GCAGTTTGTCTAAATGATGGGGAGCTATGTAGAGCTGACATTGATGGAAG
CCACACACAGTCATGAGTAGATCAAAGGTACATTTTGGATATGATGATTA
AATCAAAGACAAAATGCTTTCGTTATTTGTGTCATCAAGTTTTCTCACGG
TCGCGTTGATGC back to topprotein sequence of rna8192 >rna8192-protein ID=rna8192-protein|Name=rna8192|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MSTLIYALSLWHWTKSTMTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLL
LTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKA
NKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVA
MTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEAL
MEEVEKEGANMKQGGL back to topmRNA from alignment at KK037248.1:57164..58478+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8192 ID=rna8192|Name=rna8192|organism=Nannochloropsis gaditana|type=mRNA|length=1315bp|location=Sequence derived from alignment at KK037248.1:57164..58478+ (Nannochloropsis gaditana)
GGCTAGTAACTCATAAAAATTATTGTACACGTAGCCCTCGCCCCGCTTCT
CCCCATTAGGGATTAACTTCTAAAATAAGCCGGCGTCGTCGCATAAAAAA
GGGATTAAGTAAAAttgaaagagggaagggaggttgcTCTCTCGCTCGAA
GCCAGTGATGACGATGTCCTATCGAACCTGACTCCCGCCCTACTCACCAT
CAAGTATTGCGGCTTCCCACTCTGGTGTATGTAGGCAAACTGTGCACCGT
CGGATTCTCACGTGCGGTGGGCATCGCGTTCGAAGCATATTTGCCTGCAT
TTCCTCAAGCGATGTCAACTCTCATCTATGCTCTTTCCCTTTGGCACTGG
ACCAAGTCTACCATGACAGATCAAAGCGCCGGGAGACCTATGTTGCTCCT
GTTacctcttgctcttcttcttgccggAGTTCGTGCTTGGACCATGCCAA
AGCCACTACTGCTCACGCGGGTAAGTGCTCTTGCATCCAGCACGACGGGA
AGTGATGAAGTATCTTTTCTCCGCCTGTCTCTTGCGCCTGAGTAGTCATA
CCAAGCTGCACCACTTAGCCCTGAGGGTCGCGCTAAGTTTACACAGATTT
TTACTACATTCTTGTTCATGTGCTCAAACTTTCCCATCGTCCCCTGCGCG
ACAGCCCTCCTTGTCTcggtcttccctccttggcctaTCCCGCCCTGGCC
ACATTAGCCCCCcacgcttcccctccatcgcctcctcttcgtccacctct
CATCTAACCCGCCGCATGGCCACGGAGGACGGCCCAGAAAAAGCCAACAA
GCTCCCGATGCTCCTAGACGTGGAAACCCGCGGAGGTATCCTCTTCGTGT
CCACACTCGTCACCGCCGCCATCTTTGCGGGCTACAACGTTGCCACGGCC
CTGGGCGTGGACGGGTTGCAAGCAGGCATCTACATCTCGGTGGCCATGAC
CCTGGGTATGGTGGCGTGGACCTTTACCTACATCTTCCGGGTGGCGAACA
AGGACATGACCTACGCGAAGCAGCTGAAGAATTACGAGGACGCTGTCCTG
GCCAagcggctggaggagctggaggaggaggaggtggaggcgttgatgga
ggaggtggagaaggagggggccaaTATGAAACAGGGCGGGCTGTAAGATC
GTGAAATTTGTATTTTGGTGCGATGCTCAGGCAGGGCACtccaggcgcgg
gaggaggcagatgtatcgggagcaagaggaggtaAAGGCCCGAGCAGTGG
ATAGCCACATGCCGGACGCCGACGCAAATCGCAAAAGAATAAAAATCTGT
GAACGTTGCACCAAG back to topCoding sequence (CDS) from alignment at KK037248.1:57164..58478+ >rna8192 ID=rna8192|Name=rna8192|organism=Nannochloropsis gaditana|type=CDS|length=1302bp|location=Sequence derived from alignment at KK037248.1:57164..58478+ (Nannochloropsis gaditana)
ATGTCAACTCTCATCTATGCTCTTTCCCTTTGGCACTGGACCAAGTCTAC
CATGACAGATCAAAGCGCCGGGAGACCTATGTTGCTCCTGTTacctcttg
ctcttcttcttgccggAGTTCGTGCTTGGACCATGCCAAAGCCACTACTG
CTCACGCGGCCCTCCTTGTCTcggtcttccctccttggcctaTCCCGCCC
TGGCCACATTAGCCCCCcacgcttcccctccatcgcctcctcttcgtcca
cctctCATCTAACCCGCCGCATGGCCACGGAGGACGGCCCAGAAAAAGCC
AACAAGCTCCCGATGCTCCTAGACGTGGAAACCCGCGGAGGTATCCTCTT
CGTGTCCACACTCGTCACCGCCGCCATCTTTGCGGGCTACAACGTTGCCA
CGGCCCTGGGCGTGGACGGGTTGCAAGCAGGCATCTACATCTCGGTGGCC
ATGACCCTGGGTATGGTGGCGTGGACCTTTACCTACATCTTCCGGGTGGC
GAACAAGGACATGACCTACGCGAAGCAGCTGAAGAATTACGAGGACGCTG
TCCTGGCCAagcggctggaggagctggaggaggaggaggtggaggcgttg
atggaggaggtggagaaggagggggccaaTATGAAACAGGGCGGGCTGTA
AATGTCAACTCTCATCTATGCTCTTTCCCTTTGGCACTGGACCAAGTCTA
CCATGACAGATCAAAGCGCCGGGAGACCTATGTTGCTCCTGTTacctctt
gctcttcttcttgccggAGTTCGTGCTTGGACCATGCCAAAGCCACTACT
GCTCACGCGGCCCTCCTTGTCTcggtcttccctccttggcctaTCCCGCC
CTGGCCACATTAGCCCCCcacgcttcccctccatcgcctcctcttcgtcc
acctctCATCTAACCCGCCGCATGGCCACGGAGGACGGCCCAGAAAAAGC
CAACAAGCTCCCGATGCTCCTAGACGTGGAAACCCGCGGAGGTATCCTCT
TCGTGTCCACACTCGTCACCGCCGCCATCTTTGCGGGCTACAACGTTGCC
ACGGCCCTGGGCGTGGACGGGTTGCAAGCAGGCATCTACATCTCGGTGGC
CATGACCCTGGGTATGGTGGCGTGGACCTTTACCTACATCTTCCGGGTGG
CGAACAAGGACATGACCTACGCGAAGCAGCTGAAGAATTACGAGGACGCT
GTCCTGGCCAagcggctggaggagctggaggaggaggaggtggaggcgtt
gatggaggaggtggagaaggagggggccaaTATGAAACAGGGCGGGCTGT
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