EWM22472.1, cds8168 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|585102978|gb|EWM22472.1| (Protein of unknown function DUF3007 [Nannochloropsis gaditana]) HSP 1 Score: 436.417 bits (1121), Expect = 8.476e-155 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 1 MSTLIYALSLWHWTKSTMTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGANMKQGGL 216
MSTLIYALSLWHWTKSTMTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGANMKQGGL
Sbjct: 1 MSTLIYALSLWHWTKSTMTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGANMKQGGL 216
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|553184240|ref|XP_005854057.1| (hypothetical protein NGA_0486600 [Nannochloropsis gaditana CCMP526] >gi|422295005|gb|EKU22304.1| hypothetical protein NGA_0486600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 401.749 bits (1031), Expect = 2.682e-141 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query: 18 MTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGANMKQGGL 216
MTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGANMKQGGL
Sbjct: 1 MTDQSAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGANMKQGGL 199
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|1210532114|dbj|GAX09273.1| (hypothetical protein FisN_17Lu018 [Fistulifera solaris]) HSP 1 Score: 120.939 bits (302), Expect = 5.248e-31 Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 0
Query: 99 KANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVAT-ALGVDGLQAGIYISVAMT-LGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKE 207
+ KLP LD T+GG++F+S ++ YNVAT G D ++ GI I V T VAW TYIFRVA KDMTYAKQLK+YEDAV+AKRLEEL+E+EV+AL EE+E++
Sbjct: 65 EGRKLPFWLDPGTKGGVVFLSFVLFLVPLLAYNVATNVFGADEIETGITIGVGFTVFATVAWVSTYIFRVATKDMTYAKQLKDYEDAVIAKRLEELDEDEVKALQEEIERD 175
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|1072231634|gb|OEU16366.1| (hypothetical protein FRACYDRAFT_185821 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 118.627 bits (296), Expect = 1.183e-30 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 0
Query: 91 MATEDGPEKANK--LPMLLDVETRGGILFVSTLVTAAIFAGYNVATA-LGVDGLQAGIYISVAMTLG-MVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKE 207
M DG + A+K LP LD TRGG + + ++ F GY +AT+ G++G+ AG +I V T + W FTYIFRVA KDMTYAKQLK+YE+AV+AKRLEEL+++E++AL+EE+E++
Sbjct: 1 MENGDGEKSASKSNLPFWLDPGTRGGAVVLGIILFIVPFIGYAIATSVFGIEGVDAGKWIGVGFTAAATLVWVFTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDDDEIQALVEEIERD 121
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|551562018|ref|XP_005767818.1| (hypothetical protein EMIHUDRAFT_427662 [Emiliania huxleyi CCMP1516] >gi|485618364|gb|EOD15389.1| hypothetical protein EMIHUDRAFT_427662 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 117.857 bits (294), Expect = 1.045e-29 Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 0
Query: 72 PPRFPSIASSSS--------TSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYN-VATALGVDGLQAGIYISVA-MTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGA 209
PPR P + + S S +A E E+ LP LD+ T+GGI+F S + A F YN + +G+D + AG I V + LG VAWT TY+FRVANKDMTYAKQL++YE+AV+ KR EEL+ +EV ALM+E+ +G+
Sbjct: 27 PPRAPGVVAQHSPLRAAAAAPSRHAAPVAAE---ERRGGLPFFLDIGTKGGIVFYSVIGIVAPFLLYNFLQDQMGMDVVGAGNVILVGYVGLGTVAWTSTYVFRVANKDMTYAKQLRDYENAVIQKRFEELDNDEVSALMDEIYTDGS 171
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|551552124|ref|XP_005763457.1| (hypothetical protein EMIHUDRAFT_419792 [Emiliania huxleyi CCMP1516] >gi|551585070|ref|XP_005777833.1| hypothetical protein EMIHUDRAFT_420144 [Emiliania huxleyi CCMP1516] >gi|485612840|gb|EOD11028.1| hypothetical protein EMIHUDRAFT_419792 [Emiliania huxleyi CCMP1516] >gi|485630142|gb|EOD25404.1| hypothetical protein EMIHUDRAFT_420144 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 117.857 bits (294), Expect = 1.045e-29 Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 0
Query: 72 PPRFPSIASSSS--------TSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYN-VATALGVDGLQAGIYISVA-MTLGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKEGA 209
PPR P + + S S +A E E+ LP LD+ T+GGI+F S + A F YN + +G+D + AG I V + LG VAWT TY+FRVANKDMTYAKQL++YE+AV+ KR EEL+ +EV ALM+E+ +G+
Sbjct: 27 PPRAPGVVAQHSPLRAAAAAPSRHAAPVAAE---ERRGGLPFFLDIGTKGGIVFYSVIGIVAPFLLYNFLQDQMGMDVVGAGNVILVGYVGLGTVAWTSTYVFRVANKDMTYAKQLRDYENAVIQKRFEELDNDEVSALMDEIYTDGS 171
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|298709100|emb|CBJ31047.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 116.316 bits (290), Expect = 4.175e-29 Identity = 58/110 (52.73%), Postives = 74/110 (67.27%), Query Frame = 0
Query: 98 EKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTL-GMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEK 206
++ N LP LD TRGG + V TL Y TA+GVDG +AG ++ V TL G++AW +Y FRVA K+MTYA QLKNYE AV+ KR ELEEEEV+AL++EV +
Sbjct: 69 QEKNNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 178
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|397576293|gb|EJK50173.1| (hypothetical protein THAOC_30885, partial [Thalassiosira oceanica]) HSP 1 Score: 117.472 bits (293), Expect = 9.827e-27 Identity = 68/145 (46.90%), Postives = 98/145 (67.59%), Query Frame = 0
Query: 67 PGHISPPRFPS--IASSSSTSHLTRRMATEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATA-LGVDGLQAGIYISVAMTL-GMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKE 207
P +S PR P+ A + T RM+ ++ E + LPMLLD T+GG +F+S ++ YNVAT +G+D ++ G I V ++ M+ W +Y+FRVA KDMTYAKQLK+YEDAV+AKRLEEL+E+EV+AL+E++E+E
Sbjct: 121 PLSLSQPRRPADPFAPCERSGRTTLRMSDQN-TEAKSSLPMLLDPGTKGGAVFLSVVLFVVPLIVYNVATGPMGMDEIEVGRNIGVGFSVVSMIFWLGSYVFRVATKDMTYAKQLKDYEDAVIAKRLEELDEDEVQALVEDIERE 264
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|219119239|ref|XP_002180384.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407857|gb|EEC47792.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 109.383 bits (272), Expect = 2.070e-26 Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0
Query: 92 ATEDGPEKANKLPMLLDVETRGGILFVS-TLVTAAIFAGYNVATALGVDGLQAGIYISVAMT-LGMVAWTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVEKE 207
A DG + KLP LD T+GG +F+S L I + T G D ++ G +I + T L + W TY+FRVA KDMTYAKQLK+YE+AV+AKRLEEL+E+E++AL EEVE++
Sbjct: 61 AEADGKVEKTKLPFWLDPGTKGGAVFLSLALFLFPILVYSIMTTFFGFDEIETGKWIGIGFTVLATLGWVSTYLFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEIQALQEEVERD 178
BLAST of EWM22472.1 vs. NCBI_GenBank
Match: gi|551644239|ref|XP_005824911.1| (hypothetical protein GUITHDRAFT_165340 [Guillardia theta CCMP2712] >gi|428168993|gb|EKX37931.1| hypothetical protein GUITHDRAFT_165340 [Guillardia theta CCMP2712]) HSP 1 Score: 105.916 bits (263), Expect = 1.788e-25 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0
Query: 98 EKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVA-WTFTYIFRVANKDMTYAKQLKNYEDAVLAKRLEELEEEEVEALMEEVE 205
E++N P L ++TRGG + S ++ A F Y TA+ D LQAG I+ +G+ A WTF+YIFRV KDMTY+KQLK YEDAV+AKR EEL+E+EVEAL+ ++E
Sbjct: 9 EESNVSPWLR-LDTRGGAIVWSIILLVAPFLAYGPVTAVVGDELQAGRIIAAVYMVGLCAAWTFSYIFRVGTKDMTYSKQLKAYEDAVIAKRFEELQEDEVEALISDLE 116 The following BLAST results are available for this feature:
BLAST of EWM22472.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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