rna8185, rna8185 (mRNA) Nannochloropsis gaditana

Overview
Namerna8185
Unique Namerna8185
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length822
Alignment locationKK037248.1:41689..43044 -

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Properties
Property NameValue
Productcop9 signalosome complex subunit 4
Orig transcript idgnl|cribi|Naga_101124g2.2593.mrna
Orig protein idgnl|cribi|Naga_101124g2.2593
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:41689..43044 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101124g2gene7928Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8185rna8185-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22511.1cds8161Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8185 ID=rna8185|Name=rna8185|organism=Nannochloropsis gaditana|type=mRNA|length=822bp
CCGCAACTCACTCCCTCCCTTCCTCTGTCTCTCCCTCCCTCCCTCCTTCC
CTCCCTCCTTCCCTCCCTCCTTCCCCAGGACGAGCGCACGAGCGCCTTGG
AGACGCTGGAGAAGCACGGTGCCCACGCCACTGTCCTAGAGAAGACACAC
CGGGAGCAGATCTTGTCGAGGGCGGAGATGGGGGAGTTCGCGGAGGTTCT
GCAGGAGCACCAGCGCGTGCGCACCTCGGACGGGTTCACGATACTGGAAA
AAGCCATCATCGAGCACAATGTGGTGGCGGCCAGCAAGGTCTACGACAAC
ATTCGCATCAGCGAGCTCGGCCGGCTCTTGAAGATCGCAGAGGACGAGGC
AGAGAGGGTGGCCGCCCGAATGATCGGTGAGGGTCGTCTCAAGGGCTGTA
TCGATCAGACAGAAGGGCTCCTTCACTTCGAGGAGGGGGGGGAGGGAGGA
AAGGAGGGAGGGAAAGAGGGGGAGGCAGGGGTTTTGTTGCAAAATTGGGA
CGAGCGGATCGCGGGGGCATGTCAGGAGGTGAATGCGATCTTGGAAGAGG
CGGGTAAGACCATGCCGGGCGTTTTGATAGGGGAGTAGGGGGGGAGGGAG
GGAGGCAGGGCGGGGGGGAGGAACGGAGAAGCACTTTTGTGAATGAACTG
TGAAAGAGGAAAAAAGAATCTAGGGTGTAGGAAGGCGGCGCGTGTGCAGA
GAAAGAAGGGCGGTCAGGGCCACATTTGAAGGGAGGGACCTTCGCGTCGC
TTCATTTGCTTCATTTTGACTCGGCCATCCCCCTATCCGAGACGCGTGGC
ACCCATGACTCTAATACACGCT
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protein sequence of rna8185

>rna8185-protein ID=rna8185-protein|Name=rna8185|organism=Nannochloropsis gaditana|type=polypeptide|length=269bp
MVAVHAAVAEIQSMASQADRTSRQKCKYTELLTELMDSFIPPSSSSAPTT
SLVSFVSEMKALVDHLLSPQVSTLVSRSVFAHLGQSLLERLPRQGKYACS
EEQLQALQDVAEYALEQGGSHTQAFEEADASVREFLFEHLKAQGCYRSAA
SVLAGMNMDASTRPLSEDAKADTYVKIAETFLVEDQAVEAEAFVNRASGL
MEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQTQRREVPEEEL
LLLLGRAVTCAILGKAGPQ
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mRNA from alignment at KK037248.1:41689..43044-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8185 ID=rna8185|Name=rna8185|organism=Nannochloropsis gaditana|type=mRNA|length=1356bp|location=Sequence derived from alignment at KK037248.1:41689..43044- (Nannochloropsis gaditana)
TTACACACAGTCAAGGCAGAGTCGTCGATCGCACACGATCGGTTGGCGGA
CATGGTGGCAGTGCACGCGGCCGTGGCGGAAGTAAGTGCTCGTGACTTCT
ACCTCCCCTCTCCCACATTCTAAAACCGCGCCAGGCACGCCTCCTCCTCT
AGTCTTCTACCTCATGCATGAAACGTGGCGCCTGGAAAAGCGTCGGTTCC
CTCTTGTGTTGCTACAATAGGCTTTGGTCACCCGCTGTCATTAAACATCA
TTGATTTTTCCCCTCATTCCCCTTGGTGCTCTTTCCCCACCTGCCTTTTC
CCGCTCCTCCCTCCTATCCCAGATCCAGTCCATGGCCTCGCAGGCGGATC
GGACTTCGCGTCAAAAATGCAAATATACGGAGCTGCTCACCGAGCTGATG
GACAGCTTTATCCCTCCTTCTTCCTCCTCTGCGCCAACCACCTCCCTGGT
CTCCTTCGTCTCGGAGATGAAGGCGCTCGTCGACCACCTCCTCTCCCCTC
AGGTGTCCACGCTTGTCTCCAGGAGTGTGTTCGCCCATCTTGGCCAGTCC
TTGCTAGAAAGACTTCCCAGGCAGGGCAAGTATGCCTGCAGCGAGGAACA
ACTCCAGGCCCTGCAGGATGTCGCGGAGTACGCGTTGGAACAAGGGGGGA
GCCACACCCAAGCCTTCGAAGAGGCCGACGCCTCGGTCCGGGAATTCCTC
TTCGAGCATTTGAAAGCCCAGGGGTGCTACAGGTCTGCGGCCAGTGTCCT
GGCGGGCATGAACATGGACGCGAGCACGCGTCCCCTGAGCGAAGACGCCA
AGGCGGACACATACGTTAAGATCGCGGAGACCTTTTTGGTGGAGGACCAG
GCCGTAGAGGCCGAGGCCTTTGTGAACAGAGCCAGCGGGCTGATGGAGGC
GGTCACGGACTACTGGGTGCAGGTGGGGAAAGGGAAGGAGAGGGAGGGAG
GGAGGGCGGGAACGAGGACGGCTTTGTCCCCCTCCTCGTCGGCGTGCCGG
GCGCTCCGTGTGCTTCGAGCCATCGATGCGTTTTATTGCACGCTTCTTCC
GTGTTGAACTCGACTCCCTCCCTCTCTCCCTTCTTTCGTCCTTCCCTCCC
TCTCTCAACTCCTTCCCCTCTTCCTCCCTCTCTCCCTCTCTTCTTCCTCC
CTCCCTCCCTCCCCCCCTCCCTCCCTAGCTTCGCTACCGAGTCACCTACG
CGAAGGTTCTGGACGCGAACCGGAAGTTTCTGGAAGCCGCCCTCCGCTAC
CACGAGCTCAGTCAGACCCAACGTCGGGAGGTGCCCGAGGAAGAGCTCTT
GCTCCTGCTCGGGCGGGCCGTTACCTGCGCCATTCTAGGGAAGGCGGGGC
CGCAAC
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Coding sequence (CDS) from alignment at KK037248.1:41689..43044-

>rna8185 ID=rna8185|Name=rna8185|organism=Nannochloropsis gaditana|type=CDS|length=2424bp|location=Sequence derived from alignment at KK037248.1:41689..43044- (Nannochloropsis gaditana)
CTTCGCTACCGAGTCACCTACGCGAAGGTTCTGGACGCGAACCGGAAGTT
TCTGGAAGCCGCCCTCCGCTACCACGAGCTCAGTCAGACCCAACGTCGGG
AGGTGCCCGAGGAAGAGCTCTTGCTCCTGCTCGGGCGGGCCGTTACCTGC
GCCATTCTAGGGAAGGCGGGGCCGCAACATCCAGTCCATGGCCTCGCAGG
CGGATCGGACTTCGCGTCAAAAATGCAAATATACGGAGCTGCTCACCGAG
CTGATGGACAGCTTTATCCCTCCTTCTTCCTCCTCTGCGCCAACCACCTC
CCTGGTCTCCTTCGTCTCGGAGATGAAGGCGCTCGTCGACCACCTCCTCT
CCCCTCAGGTGTCCACGCTTGTCTCCAGGAGTGTGTTCGCCCATCTTGGC
CAGTCCTTGCTAGAAAGACTTCCCAGGCAGGGCAAGTATGCCTGCAGCGA
GGAACAACTCCAGGCCCTGCAGGATGTCGCGGAGTACGCGTTGGAACAAG
GGGGGAGCCACACCCAAGCCTTCGAAGAGGCCGACGCCTCGGTCCGGGAA
TTCCTCTTCGAGCATTTGAAAGCCCAGGGGTGCTACAGGTCTGCGGCCAG
TGTCCTGGCGGGCATGAACATGGACGCGAGCACGCGTCCCCTGAGCGAAG
ACGCCAAGGCGGACACATACGTTAAGATCGCGGAGACCTTTTTGGTGGAG
GACCAGGCCGTAGAGGCCGAGGCCTTTGTGAACAGAGCCAGCGGGCTGAT
GGAGGCGGTCACGGACTACTGGGTGCAGATGGTGGCAGTGCACGCGGCCG
TGGCGGAACTTCGCTACCGAGTCACCTACGCGAAGGTTCTGGACGCGAAC
CGGAAGTTTCTGGAAGCCGCCCTCCGCTACCACGAGCTCAGTCAGACCCA
ACGTCGGGAGGTGCCCGAGGAAGAGCTCTTGCTCCTGCTCGGGCGGGCCG
TTACCTGCGCCATTCTAGGGAAGGCGGGGCCGCAACATCCAGTCCATGGC
CTCGCAGGCGGATCGGACTTCGCGTCAAAAATGCAAATATACGGAGCTGC
TCACCGAGCTGATGGACAGCTTTATCCCTCCTTCTTCCTCCTCTGCGCCA
ACCACCTCCCTGGTCTCCTTCGTCTCGGAGATGAAGGCGCTCGTCGACCA
CCTCCTCTCCCCTCAGGTGTCCACGCTTGTCTCCAGGAGTGTGTTCGCCC
ATCTTGGCCAGTCCTTGCTAGAAAGACTTCCCAGGCAGGGCAAGTATGCC
TGCAGCGAGGAACAACTCCAGGCCCTGCAGGATGTCGCGGAGTACGCGTT
GGAACAAGGGGGGAGCCACACCCAAGCCTTCGAAGAGGCCGACGCCTCGG
TCCGGGAATTCCTCTTCGAGCATTTGAAAGCCCAGGGGTGCTACAGGTCT
GCGGCCAGTGTCCTGGCGGGCATGAACATGGACGCGAGCACGCGTCCCCT
GAGCGAAGACGCCAAGGCGGACACATACGTTAAGATCGCGGAGACCTTTT
TGGTGGAGGACCAGGCCGTAGAGGCCGAGGCCTTTGTGAACAGAGCCAGC
GGGCTGATGGAGGCGGTCACGGACTACTGGGTGCAGATGGTGGCAGTGCA
CGCGGCCGTGGCGGAACTTCGCTACCGAGTCACCTACGCGAAGGTTCTGG
ACGCGAACCGGAAGTTTCTGGAAGCCGCCCTCCGCTACCACGAGCTCAGT
CAGACCCAACGTCGGGAGGTGCCCGAGGAAGAGCTCTTGCTCCTGCTCGG
GCGGGCCGTTACCTGCGCCATTCTAGGGAAGGCGGGGCCGCAACATCCAG
TCCATGGCCTCGCAGGCGGATCGGACTTCGCGTCAAAAATGCAAATATAC
GGAGCTGCTCACCGAGCTGATGGACAGCTTTATCCCTCCTTCTTCCTCCT
CTGCGCCAACCACCTCCCTGGTCTCCTTCGTCTCGGAGATGAAGGCGCTC
GTCGACCACCTCCTCTCCCCTCAGGTGTCCACGCTTGTCTCCAGGAGTGT
GTTCGCCCATCTTGGCCAGTCCTTGCTAGAAAGACTTCCCAGGCAGGGCA
AGTATGCCTGCAGCGAGGAACAACTCCAGGCCCTGCAGGATGTCGCGGAG
TACGCGTTGGAACAAGGGGGGAGCCACACCCAAGCCTTCGAAGAGGCCGA
CGCCTCGGTCCGGGAATTCCTCTTCGAGCATTTGAAAGCCCAGGGGTGCT
ACAGGTCTGCGGCCAGTGTCCTGGCGGGCATGAACATGGACGCGAGCACG
CGTCCCCTGAGCGAAGACGCCAAGGCGGACACATACGTTAAGATCGCGGA
GACCTTTTTGGTGGAGGACCAGGCCGTAGAGGCCGAGGCCTTTGTGAACA
GAGCCAGCGGGCTGATGGAGGCGGTCACGGACTACTGGGTGCAGATGGTG
GCAGTGCACGCGGCCGTGGCGGAA
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Synonyms
Publications