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Properties
| Property Name | Value |
|---|
| Product | cop9 signalosome complex subunit 4 |
| Orig transcript id | gnl|cribi|Naga_102065g1.2229.mrna |
| Orig protein id | gnl|cribi|Naga_102065g1.2229 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:40440..41567 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8184 ID=rna8184|Name=rna8184|organism=Nannochloropsis gaditana|type=mRNA|length=2024bp
TGGCGAAAGCCATATGCGTGCGAAATGTGTGGTTGCAGCATGACGGAGCT
TTTGAAACGCTTTGAGGCAAGGCGGTAGAGGCGGACAAAACCAACGAGTG
GCTCCCGGGGGGGTTGATGTCGCTCCCTGAAGCATAGGCTTGCGTACGTC
GTGACTGCAACCTAGGGGTATCGGTGCTACTTCTTTCTTAATATATTGCC
ACGCTGCAGACACCACAGTTTCCGTCGTCACGATACGTACGTCGAATACG
GCGGGAGCACGCTGAAGGAGGAGGAGGAGGGCGCCGCGCACCGTAAATAA
TAAATGGCAAGATGGAAGGCGAGCTCAGGTTATGCGAAAGCGCTCAGGCG
CAGTAGGTCAGAGCATGGACGCCTCCTCTTCCTCTCTGTCCTTGTCGCTG
CGTACAGCCGGCATATCTTCGTCACCCCCTTCCGTTGCACCTACCCGTCC
CGGCTGCCATCTGTCAGGGGCCAAGCCCCCCCTTGTTCTGGAAGACTGCA
CGCGACCGCCACGACCCACATGCGCCGGTCGTCATCCCCCCCGCCCTCCC
CCTCCTCATCCTCCTCCTCCACCGTCCCGCGACCCTCTGCCCCTTCCCCT
CCGAGTCGCCGAAGAACCCCTTCCGTTTCCATCACCTTCAGCGTCCCTCC
TTCACCCCCCCTGCTCGACCCGGGCAGTCGCCTTCAGCCCCCTCCACTGT
CAGCACCCCGTTGCATCCCCGCCCCGCCGCGCCCCTCTCCCTCACGGGGC
CCTCCCGTTCCCGCCACCTCCACCACCCGCCGCGTCCTCAACCTCCTCAC
CGACGCCCTCCCCGACCTCGACCCCTCCCTCCTTCCCCTTCTGCCATCTT
CGTTCTTCCAACAGCCCCCCGAACGCATCCAAGCACGCCTCAGCTTCCTC
CACACCACCCTCCCTGGCATCGATCTGCCTCACGCCCTGCGTCGCGTCCC
CAAGCTCCTCACGTACTACGGCATGGGCGCCCCGGCCATGGAACGTCGCC
TCGCGCACACGTACTCCAATCTCATCGCCGCCCTTCCCAAGAAACAGGCG
GCCCTGAACCTCCTCAATGCGGCCCCTCGTCTCCTCCTTCGGGACTTTGA
GACGCGGATCGAACCCTATTTGCATACCTTCACCACGACCTCGCCCACCC
TGGACGCAGCCTATCTGCTCACGCAGCACCCCGTCCTCCTCCACAAGGGC
ATCGCTTCCCACCTCCTCCCCCGACTTGCCGCCCTGCCTACTCTCTTCCC
CCCCTCCTTCCCCCCTCCCGGCCCCGAAGACCTCGGCGCCCTCCTCACTC
GCTACCCCCCCCTCCTCACCCTCCCCCTCCCGGACCTCTCCGCCCGCCTC
GCCGCCCTCTCCCTCCTCCTCCCCCCCGACCTCCTCCTCCCCACCCTCAT
CCGCCACCCCCGGGCATGGACGGCGGATCTGACCGAGGTCATCGGGCCTC
AGATCCACCTCCTCCTCTCCGCGCTCGGACCGACCACCACCAAGACCGTG
CTCCACCACCTCCCTTCCATCCTCTATCACCCGCCCGACGCCCTCACCCA
CAAGCTCGACCTCCTCTCCTCCCTCCTCGGCTCCAGTGCGGGCGCAAACG
TCCTGCTGGCCCGCAATCCCATGATTCTGGCCATGGATATCGCCGCCAAT
GTCGCCCCCAAGTTAAGGTATCTGCACTCCCTCTTCCCCCACATGGACGA
AACCAGCTTCGTGAGCCTGGTCGGGAGCGCGGCCGGGAGCCAGTGCCTGA
GTGCTGCCTTTGGGCGGCTGGGGCGGTTGTCCTACCTGCTACAGATCCAG
CCGGACATGGACGTCGAGGAAGGGATGCGGCTAGTGGGGGCGCCCTCGGA
AGAACTCCGGCGCTGGTACCCCGGTTACGAGAACTTTCTGGAAGATCGGA
TCGAGCCCCGTTTCCCCGCCTACTCGTGGGAGCAGCTCTGCGCATTGCCG
TTTGCGGTGCGGGAACAAGCCCATGGAGAGCTCCTGCACGGAGCGTTCAG
CCGCGAGGAGGGAGGGAGAAGGGG back to topprotein sequence of rna8184 >rna8184-protein ID=rna8184-protein|Name=rna8184|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
MGEFAEVLQEHQRVRTSDGFTILEKAIIEHNVVAASKVYDNIRISELGRL
LKIAEDEAERVAARMIGEGRLKGCIDQTEGLLHFEEGGEGGKEGGKEGEA
GVLLQNWDERIAGACQEVNAILEEAGKTMPGVLIGE back to topmRNA from alignment at KK037248.1:40440..41567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8184 ID=rna8184|Name=rna8184|organism=Nannochloropsis gaditana|type=mRNA|length=1128bp|location=Sequence derived from alignment at KK037248.1:40440..41567- (Nannochloropsis gaditana)
CCGCAACTCACTCCCTCCCTTCCTCTGTCTCTCCCTCCCTCCCTCCTTCC
CTCCCTCCTTCCCTCCCTCCTTCCCCAGGACGAGCGCACGAGCGCCTTGG
AGACGCTGGAGAAGCACGGTGCCCACGCCACTGTCCTAGAGAAGACACAC
CGGGAGCAGATCTTGTCGAGGGCGGAGATGGGGGAGTTCGCGGAGGTTCT
GCAGGAGCACCAGCGCGTGCGCACCTCGGACGGGTTCACGATACTGGAAA
AAGCCATCATCGAGCACAATGTGGTGGCGGCCAGCAAGGTACAGCATCCT
CCTCTTTTGGGTGGTTTTACGCTTGCTTGGGGTTTCGGTTCTAGAGTTCC
TTTTTTGGGTGTATGTCTGGTTGGCGGCGGGTGTATGGGTCAGTTAAGCC
GGGCGTGCTCCCCTCGCACCCTCCAGTCTTGCCTTTTACCGGCCCTCCAC
CACCCTCGTCTCCTTAATCTTGTGGACTTTTCGCCCTCCCTTCGTCCCCT
CTGCCTACCTTGTGTCAGTCTTCCCACAGCCGTAACCTCAAGCACGCCCT
CACTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCGTCCAGGTCTAC
GACAACATTCGCATCAGCGAGCTCGGCCGGCTCTTGAAGATCGCAGAGGA
CGAGGCAGAGAGGGTGGCCGCCCGAATGATCGGTGAGGGTCGTCTCAAGG
GCTGTATCGATCAGACAGAAGGGCTCCTTCACTTCGAGGAGGGGGGGGAG
GGAGGAAAGGAGGGAGGGAAAGAGGGGGAGGCAGGGGTTTTGTTGCAAAA
TTGGGACGAGCGGATCGCGGGGGCATGTCAGGAGGTGAATGCGATCTTGG
AAGAGGCGGGTAAGACCATGCCGGGCGTTTTGATAGGGGAGTAGGGGGGG
AGGGAGGGAGGCAGGGCGGGGGGGAGGAACGGAGAAGCACTTTTGTGAAT
GAACTGTGAAAGAGGAAAAAAGAATCTAGGGTGTAGGAAGGCGGCGCGTG
TGCAGAGAAAGAAGGGCGGTCAGGGCCACATTTGAAGGGAGGGACCTTCG
CGTCGCTTCATTTGCTTCATTTTGACTCGGCCATCCCCCTATCCGAGACG
CGTGGCACCCATGACTCTAATACACGCT back to topCoding sequence (CDS) from alignment at KK037248.1:40440..41567- >rna8184 ID=rna8184|Name=rna8184|organism=Nannochloropsis gaditana|type=CDS|length=822bp|location=Sequence derived from alignment at KK037248.1:40440..41567- (Nannochloropsis gaditana)
GTCTACGACAACATTCGCATCAGCGAGCTCGGCCGGCTCTTGAAGATCGC
AGAGGACGAGGCAGAGAGGGTGGCCGCCCGAATGATCGGTGAGGGTCGTC
TCAAGGGCTGTATCGATCAGACAGAAGGGCTCCTTCACTTCGAGGAGGGG
GGGGAGGGAGGAAAGGAGGGAGGGAAAGAGGGGGAGGCAGGGGTTTTGTT
GCAAAATTGGGACGAGCGGATCGCGGGGGCATGTCAGGAGGTGAATGCGA
TCTTGGAAGAGGCGGGTAAGACCATGCCGGGCGTTTTGATAGGGGAGTAG
ATGGGGGAGTTCGCGGAGGTTCTGCAGGAGCACCAGCGCGTGCGCACCTC
GGACGGGTTCACGATACTGGAAAAAGCCATCATCGAGCACAATGTGGTGG
CGGCCAGCAAGGTCTACGACAACATTCGCATCAGCGAGCTCGGCCGGCTC
TTGAAGATCGCAGAGGACGAGGCAGAGAGGGTGGCCGCCCGAATGATCGG
TGAGGGTCGTCTCAAGGGCTGTATCGATCAGACAGAAGGGCTCCTTCACT
TCGAGGAGGGGGGGGAGGGAGGAAAGGAGGGAGGGAAAGAGGGGGAGGCA
GGGGTTTTGTTGCAAAATTGGGACGAGCGGATCGCGGGGGCATGTCAGGA
GGTGAATGCGATCTTGGAAGAGGCGGGTAAGACCATGCCGGGCGTTTTGA
TAGGGGAGTAGATGGGGGAGTTCGCGGAGGTTCTGCAGGAGCACCAGCGC
GTGCGCACCTCGGACGGGTTCACGATACTGGAAAAAGCCATCATCGAGCA
CAATGTGGTGGCGGCCAGCAAG back to top
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