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Properties
| Property Name | Value |
|---|
| Product | superoxide dismutase |
| Orig transcript id | gnl|cribi|Naga_100558g2.1624.mrna |
| Orig protein id | gnl|cribi|Naga_100558g2.1624 |
| Gene | Fe/Mn |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:30955..33328 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8179 ID=rna8179|Name=rna8179|organism=Nannochloropsis gaditana|type=mRNA|length=2672bp
AGCGTGGGCCAACAGGTAAGAATAGAGTAGGGCGCAGACAACCAACACGT
GGTCACATTTTGGCCACAGACGTCTTTTCCCTCTTCTCCTCCTGCACGTT
GCCTGTACCATTGTCGCCGTGGCTATTTGAGGATGTGAGTAATGTGCGGG
TACGGATGAGACAGTCAGTTGAAGTTGTCGGAGTGTCTCCGATGGGGTTG
CGGAGGCTGTAAGCTTAGTTCTTTCACTTTATCCCACGTCGAGACCGAGA
AGTACATAACATTTGTGGCGCCTAAGGTTGATTGCGACCCGCGTTGGTCG
ACAGAGCCAGCACTAGTGCACCACCACTGTAAACGGAAGGGGATACAGGA
CCTCCTCCCCCGACCCGGGCAACACGCGCATACGAGCCCCCTTTCGATAC
CAAAATAATTACACAAAATGTTTCATGAAAAGAAATATAAGAATCCCTTT
TTGCTCTTCGAATAGGAAGAGGCCCATTCCAAATTACAATTGCACCAGAA
CTCACTTAGTTTCACTATTCCATTCCTGCTAGAGCACCATGTCCGCTTTC
AGACCGGCCCCTCCTCGACCTCCATTACGTCGTAGCAGCCTTTTTTTGCT
CCTTCTCCGCCTCTCTCTGCCCGCCAACGCTTTCATCATGTCCTGTAGAG
AGACAGGGTCGGCCCCGGCTTCTCCTTCCCCCCTCATTGTCCGCGCTGCC
CCCTCCTCCGTGGCTGGCCTCCATGCGCGCAAAAGCCTCTTTACACAAGC
GGGTAGCGTCCTTCTCGGCGCATCGGTCCTGGGAAAAGCCCCCCGCAAGG
CCCAGGCATGGTGTGGCAAGGTATGCTAACGGGTGCATCCGGTCGAGAGG
GTTGGGAGAGTGATAGAAATGGTGCCCTGAGTGGTGAAAGGCAGGATGTC
GCCAATGACCGGTTACCTCGTCCCCAGTGCCCGAGAGTCATTTAAACCAG
CACGTACGCCGTCCTCTCTTGGAGGATGAAGCAAATGATTCAGCGTCGGG
ATCATTTGGAAGCGATGAAACACGCATGTGCCCGCCTCCTCCTGCGCCTC
GTCCCGTTCGCTCCCCCGATGACTCGGAGGGAGGAGACTCTCCTTCTCCA
TGCTCATCCATCCCCCGCCCCCCTACAGCCATACCCCCCCTGGGCCTACC
GCCTTCGGTTCAACGACGGCCTCATCCCCGTCTCCCTCCCCGGCATGCCC
GCGCCTGCCGACCTCTTCTTGCGCGTGGTTGGGGATGAACAGAAGGAGAA
GGACCAGGGTCTTGCCCCCATCCTCCTCGTGCCCGGCGGGCCCGGGCTGG
CGCACGACTACACCGAGACCTTGGAGGCTCTCGTCTACGGCGACCGCCGC
GTGGTCAGTTTCGACCCGGTCGGCACCGGGCAGTCCAGCCGCTCCCTTCC
CCCCGCCCTCGCCGACGGGCCCCCGGGGGGGGCGGAGACCGCCGAGTGGA
AGCAAGCCTGGAGTGCGCTTTTGCAGGAGCAACTCCGGGAAATCCTTCGG
TTTCTAGAAATCGACTCGCACCACGTCTGGGCCCAAGGCGCAGCATGCCT
CCCGGCCCTCCAGCACACTGCCGCCTTTGCCCCCCCTTCCTCTGCCCCCT
CCCCCTCTCCCTCCCCCTCCGCCTTGGCCCGGGGCGTCAAGTCCTTGACC
CTCGCGGACCCCTTCGTCTTCGCCCCCGGGGCCCGAAGCCTCCCTTCCCT
CTACTCCGACCGGGGCGCGGCTGTTCCCCTCTGCGTCACCGAGTCCGTGG
CCGGGGTGAAGGGCGGGGTGAAGGGCGGGGGGGAGGGCGGGAGGGAGGAC
AGGGTGCATTACGAGAGGCAATGGGAGGGGTTGCCGGAGCTTGGGAAGGT
GGGAAATCGGCCCATATTCCTCAGCTACGGCAGCACGGGGGAAGGGGAAG
GGAGTCTGGACGAGGTGGCAGTCGGGCGCCTGAGAAGCCGGGTGGAGGAG
GGAGGAAGGGAGGGAGGGGTGGTGGTCAAGAAATTTGGAAGCCGCTTGCC
GCATGTGGACGAGCCTGAGGCCTACGTGGACTGGCTGGATGAATTGCTAC
AGGGCACCGAGAAGATGCGGCCGGCGTGAGGGAAAGGATGAGGGAAGAGG
AGGAGTGAGGGGACAGGAAGGGAGCTTCCCGGGACGATGTTGACGCATGC
GAGGGATGGGGAGGGAAGGGGAGTGAGGAAGAGGGCGGAGGGAGGGCACA
AAAGGTTCCGAGGACGAGGTGGCTTATAGGCAGGAGCAGCAAGCACGATG
ACGACAGGGTTGGAGGAGGGTAGCTGACGGTGGCGAAAGCGAGACATGCT
TCCTGAGGGAACTCTCTCGAGGGAGGGAGGAGGAGAATCTTGATGGTGGA
GGGAGGGGGAGGGAGCGAAGGAGGGCAGGGGGTGGAGGGTGGGATCAAAG
ACGAAGGCATGGGAAGGGCGACGGCGGGAGGGTTGATAAGGAAAGAAGGG
GTGATGAGAAAGGAAGGACGAGGGAGAGGAGCGGAGGGCAGGCGTGGGCG
GAGGAAGGGGACTGGGCGAGGGGCAGGGACGACAAGAGAGGGGAGAAAGC
GAGAGGGAAGATCGAGGAGACCCAACGCCGGAGAGCAGGCGCCCGAGAGA
AAAGGCTCAGACGTTCCTTGCGTGATGAGGCGGGAGGGAAAGGAAGATTC
GGGACCCTCTTCAACGACCCCC back to topprotein sequence of rna8179 >rna8179-protein ID=rna8179-protein|Name=rna8179|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYA
GKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKIN
AAFGSFDNFKSQFSTAAAGHFGSGWAWLVLKDGKLEVVSTHDASNPLKEG
LGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAEA back to topmRNA from alignment at KK037248.1:30955..33328- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8179 ID=rna8179|Name=rna8179|organism=Nannochloropsis gaditana|type=mRNA|length=2374bp|location=Sequence derived from alignment at KK037248.1:30955..33328- (Nannochloropsis gaditana)
CTATGCTGTTTTGGACGTTGAACCGATCCACAAATTGTGCATGCATGGAC
ATTGTGTGCTTCCTACATTTGCGTGTTGTCCGAGATAGACTGCTTTGCGT
GATCGTTGGCATGTCCCTCAACCGGTGCTGGCTCAGAGCGAGGGCACTGT
GTTCGCGAAATACAAGCCAAGACATGCTTTACAACCACCCCGAGCATGGA
AACCTCTTGCACCACAGCCGGTCATGCTCTCGGGACATTCTGAAGCGTGT
GACTTTGTTTTTTTACTGTTTCTTGAGTGCGTGTGATGCGGTAACAGGGC
CTACAGAGAGTTCTTACTCCCTTCGTGAATCACTCACGGGATGTTCGTAG
TTTTTCTGTCTCGTACAAGGCAAGCGCGAAACACGAAGCGATGACAAGTT
TTTTTCTCAGTATCCATTGAAATACCATTTCGTTAGTCCTTTCCAGCGTG
GGATCTAGTCATTCCTGCGCTTACCTCCCTGTGCACCAATATTTCTTACG
TCTCCTTCGACGTACATCCTGGTAAAGGAAAAGAAAATATCATGGCCATC
GAACTTCCCCCCTTGCCTTGGGATAAAAACGCCCTTGCGCCGCACATCTC
CGCGGAGACGATCGACTACCACTACGGGAAGCATCATGCGGCCTATGTCA
CCAAACTAAATGGCATGATTAAGGTACGTTACTGGCTGTCTTGCTTGATA
TCCGCTGTTTGGGCCCTTGAATGCGGCGCAGGCCCTGGACCATATTGTTT
TGTCGTTGCTATGGAACATTTCCTCTTAGCTGTGCGTCGTGGCGAGTGAG
GTTTTTCCCGGGGTCGGTCCTGGGCTCTTTGCCCTTTCGTCCCTCCTCCT
CCCCCTTACAATTGCATGACATCACGGCAGGATGACCCTGCCTACGCAGG
CAAGTCTGTAAAGGAGATCATGCTTGCCGCTCCGGCCGGTGGTCTCTTCA
ACAACGCCGCACAGGTCTGGCCTCCCATCTCCCTCTTCGTCCTTCTTGTC
GAGTCGCTCTCTCCCTCCTTCTTGTCCGTGCCTCCCTCTTCCCCTCCTTG
CCTGTCTCCCTCCCCCTTTTTCCTCTTTTTTTTTTCCTTCTCTGCCCCGT
CCTCCCTTCTTCTTCGATGCTTCCATCTGCTCGCCTCTTCACGTGATTCT
TTTTCGTCTGGCCTCTCTTCATTCCCCTTCATGGGGTCCTTCCGCTCTCG
GCCCTTCCTTCCTTTGCCCTCTCTGTCCATGTCTACCTCCCTTCCTCCTC
TCCTCGTACCTCTCTCCCTCCCTCCCTGCCGTTCGGTCTCATCACCCACC
CAATGCCCGGTCTTGACCTCCCTCCCACCTCGTCATCCCTCTCGTCTCGC
TTTATCTAGGCTGTGGTCCGTCTCATCTCCCCCTCCCCCCCCATCCCCTA
GGTATGGAACCACACGTTCTACTGGAACAGCATGGCTCCCAACGCGGGGG
GGGCGCCCTCCGGACCCATCGCCGACAAGATCAACGCCGCCTTCGGGAGC
TTCGACAACTTCAAGTCTCAGTTCTCCACAGCCGCCGCCGGGCATTTCGG
GAGCGGGTGGGCCTGGCTGGTCCTCAAGGACGGGAAATTGGAGGTGGTGT
CCACGCACGACGCAAGCAATCCGCTGAAGGAAGGCTTGGGGACCCCCCTC
CTGACCTGCGACGTGTGGGAGCACGCTTACTACGTGGACTACCGGAACGC
CCGCCCTGCCTACGTGGAGGCCTGGTGGTCGCTGGTGAACTGGGAATGGG
CCAATGCCCGGCTCGCGGAGGCGTGAGCCGGTGGGTAGGGCCGAGAGTCG
TCCGACCCGACCCCGAAGAATTGGGGCGCTGAGAGCCTCCTGGAAAGGCA
GGGAAGGCGCAGGGGTTGGTCGGGTCAGGGGAGCAGCATGGGGGTGCCGT
CCCGGGTCGCGGGGCGTGGGGGACGTGTTGTGAGGGAGCAGGCGAGGGGG
CGGTTGGGGTAGCCTGGCCGGTGAGGCTAAGGAGGGGGGGAGGCGGTCGA
GGGAGGGTCGTACAGACGGGTAGGAAAGGGTGGATGGAGACCTCTGGGGA
ATTGAATGACCGGGCAGGCCGTGCGCCATGAGAATGACAGGAGCGAGGGC
GGGGAGGCGCCAAGGATGGGAAGGGAGGGGGCCCCGAGGGGGGAGGGAAG
AAATAGACCAAGCGGTAGAATTAGAGAGAGGGGCTAGCGATGGACAGGGT
GGGGCGCAGGGGAAAGAAGGAAAAGCCGACAAGTCCGTCCGAGTCATTGC
CTCCGATCAAGGAGGGGGTCGTTGAAGAGGGTCCCGAATCTTCCTTTCCC
TCCCGCCTCATCACGCAAGGAACGTCTGAGCCTTTTCTCTCGGGCGCCTG
CTCTCCGGCGTTGGGTCTCCTCGA back to topCoding sequence (CDS) from alignment at KK037248.1:30955..33328- >rna8179 ID=rna8179|Name=rna8179|organism=Nannochloropsis gaditana|type=CDS|length=1773bp|location=Sequence derived from alignment at KK037248.1:30955..33328- (Nannochloropsis gaditana)
GTATGGAACCACACGTTCTACTGGAACAGCATGGCTCCCAACGCGGGGGG
GGCGCCCTCCGGACCCATCGCCGACAAGATCAACGCCGCCTTCGGGAGCT
TCGACAACTTCAAGTCTCAGTTCTCCACAGCCGCCGCCGGGCATTTCGGG
AGCGGGTGGGCCTGGCTGGTCCTCAAGGACGGGAAATTGGAGGTGGTGTC
CACGCACGACGCAAGCAATCCGCTGAAGGAAGGCTTGGGGACCCCCCTCC
TGACCTGCGACGTGTGGGAGCACGCTTACTACGTGGACTACCGGAACGCC
CGCCCTGCCTACGTGGAGGCCTGGTGGTCGCTGGTGAACTGGGAATGGGC
CAATGCCCGGCTCGCGGAGGCGTGAGATGACCCTGCCTACGCAGGCAAGT
CTGTAAAGGAGATCATGCTTGCCGCTCCGGCCGGTGGTCTCTTCAACAAC
GCCGCACAGATGGCCATCGAACTTCCCCCCTTGCCTTGGGATAAAAACGC
CCTTGCGCCGCACATCTCCGCGGAGACGATCGACTACCACTACGGGAAGC
ATCATGCGGCCTATGTCACCAAACTAAATGGCATGATTAAGGTATGGAAC
CACACGTTCTACTGGAACAGCATGGCTCCCAACGCGGGGGGGGCGCCCTC
CGGACCCATCGCCGACAAGATCAACGCCGCCTTCGGGAGCTTCGACAACT
TCAAGTCTCAGTTCTCCACAGCCGCCGCCGGGCATTTCGGGAGCGGGTGG
GCCTGGCTGGTCCTCAAGGACGGGAAATTGGAGGTGGTGTCCACGCACGA
CGCAAGCAATCCGCTGAAGGAAGGCTTGGGGACCCCCCTCCTGACCTGCG
ACGTGTGGGAGCACGCTTACTACGTGGACTACCGGAACGCCCGCCCTGCC
TACGTGGAGGCCTGGTGGTCGCTGGTGAACTGGGAATGGGCCAATGCCCG
GCTCGCGGAGGCGTGAGATGACCCTGCCTACGCAGGCAAGTCTGTAAAGG
AGATCATGCTTGCCGCTCCGGCCGGTGGTCTCTTCAACAACGCCGCACAG
ATGGCCATCGAACTTCCCCCCTTGCCTTGGGATAAAAACGCCCTTGCGCC
GCACATCTCCGCGGAGACGATCGACTACCACTACGGGAAGCATCATGCGG
CCTATGTCACCAAACTAAATGGCATGATTAAGGTATGGAACCACACGTTC
TACTGGAACAGCATGGCTCCCAACGCGGGGGGGGCGCCCTCCGGACCCAT
CGCCGACAAGATCAACGCCGCCTTCGGGAGCTTCGACAACTTCAAGTCTC
AGTTCTCCACAGCCGCCGCCGGGCATTTCGGGAGCGGGTGGGCCTGGCTG
GTCCTCAAGGACGGGAAATTGGAGGTGGTGTCCACGCACGACGCAAGCAA
TCCGCTGAAGGAAGGCTTGGGGACCCCCCTCCTGACCTGCGACGTGTGGG
AGCACGCTTACTACGTGGACTACCGGAACGCCCGCCCTGCCTACGTGGAG
GCCTGGTGGTCGCTGGTGAACTGGGAATGGGCCAATGCCCGGCTCGCGGA
GGCGTGAGATGACCCTGCCTACGCAGGCAAGTCTGTAAAGGAGATCATGC
TTGCCGCTCCGGCCGGTGGTCTCTTCAACAACGCCGCACAGATGGCCATC
GAACTTCCCCCCTTGCCTTGGGATAAAAACGCCCTTGCGCCGCACATCTC
CGCGGAGACGATCGACTACCACTACGGGAAGCATCATGCGGCCTATGTCA
CCAAACTAAATGGCATGATTAAG back to top
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