EWM22517.1, cds8155 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|585103030|gb|EWM22517.1| (superoxide dismutase [Nannochloropsis gaditana]) HSP 1 Score: 400.593 bits (1028), Expect = 2.458e-141 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLKDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAEA 196
MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLKDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAEA
Sbjct: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLKDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAEA 196
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|299471400|emb|CBN79353.1| (Destroys the superoxide radical which is normally produced within the cells and which are toxic to b [Ectocarpus siliculosus]) HSP 1 Score: 278.1 bits (710), Expect = 9.039e-93 Identity = 131/197 (66.50%), Postives = 157/197 (79.70%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLV-LKDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAEA 196
M+I LP LPW K+ALAPHISAETI+YHYGKHHAAYVTKLN I + GKS+ EIM A +GG+FNNAAQVWNHTFYW S++P+ GG P+G + + I FGSF+ FK FS AAGHFGSGWAWLV + G ++VV THDASNP+KEG GTP+LTCDVWEHAYY+DYRN+RP Y+ AWW+LVNW++AN LA+
Sbjct: 1 MSIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISTNSELEGKSLDEIMKTA-SGGVFNNAAQVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENLAKC 196
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|873223412|emb|CEM28879.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 269.24 bits (687), Expect = 3.882e-89 Identity = 128/195 (65.64%), Postives = 154/195 (78.97%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVL-KDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLA 194
+A +LP LP+ +AL PHISAET+ YH+GKHHAAYV KLN +I+ PA A K+++EI + G +FN AAQ+WNHTFYW+ M P GG P+G + DKI+AAFGSFD FK QFSTAAAGHFGSGWAWLV DGKL++V HDA NP+K+G G +LTCDVWEHAYYVDYRN RP YV AWW+LVNW++ANA LA
Sbjct: 9 LAFKLPDLPYKLDALQPHISAETLSYHHGKHHAAYVNKLNQLIEGRPALASKTLEEI-IKGEDGIVFNQAAQIWNHTFYWSCMKPGGGGLPTGAVKDKIDAAFGSFDAFKEQFSTAAAGHFGSGWAWLVAGDDGKLKIVGGHDAMNPMKDGSGKAILTCDVWEHAYYVDYRNERPKYVAAWWNLVNWDFANANLA 202
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|221061139|ref|XP_002262139.1| (fe-superoxide dismutase, putative [Plasmodium knowlesi strain H] >gi|78101475|pdb|2AWP|A Chain A, Crystal Structure Of Plasmodium Knowlesi Structure Of Iron Super-Oxide Dismutase >gi|78101476|pdb|2AWP|B Chain B, Crystal Structure Of Plasmodium Knowlesi Structure Of Iron Super-Oxide Dismutase >gi|193811289|emb|CAQ42017.1| fe-superoxide dismutase, putative [Plasmodium knowlesi strain H] >gi|1047809414|emb|SBO21429.1| superoxide dismutase [Fe], putative [Plasmodium knowlesi strain H] >gi|1047814254|emb|SBO20940.1| superoxide dismutase [Fe], putative [Plasmodium knowlesi strain H] >gi|1192737255|gb|OTN63956.1| Superoxide dismutase [Plasmodium knowlesi]) HSP 1 Score: 262.307 bits (669), Expect = 1.335e-86 Identity = 121/197 (61.42%), Postives = 150/197 (76.14%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVL-KDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAEA 196
MAI LP L + NAL+PHIS ET+++HY KHHA YV KLNG+IKD P +A KS+ EIM G +FNNAAQ+WNH+FYW+SM PN GG P G I +KI FGSF+NFK++FS GHFGSGW WLVL + KL ++ THDA NP+K+ G P+LTCD+WEHAYY+DYRN RP+YV+AWW+LVNW +AN L +A
Sbjct: 1 MAIILPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNGLIKDTP-FATKSLVEIM-KESTGAIFNNAAQIWNHSFYWDSMGPNCGGEPHGEIKEKIQEDFGSFNNFKNEFSNVLCGHFGSGWGWLVLNNNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRPSYVKAWWNLVNWNFANENLKKA 195
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|1154081854|ref|WP_078460918.1| (superoxide dismutase [Fe] [Solemya velum gill symbiont] >gi|1152964733|gb|OOZ79270.1| superoxide dismutase [Solemya velum gill symbiont]) HSP 1 Score: 261.922 bits (668), Expect = 1.565e-86 Identity = 128/194 (65.98%), Postives = 160/194 (82.47%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARL 193
M +LP LP++K+AL PHISAET+++H+ KHHA YVT LN +I + +A KS++EI+++APAGG+FNNAAQVWNHTFY+N MAP AGGAPSG IA I+AAFGSF++FK+ FST+AA +FGSGW WLV DG +E+ +T +A PL EGL TPLLT DVWEHAYYVD RNARPAYVE+WW+LVNWE+ NA+L
Sbjct: 1 MQHQLPELPYEKSALEPHISAETLEFHHDKHHATYVTNLNNLI-EGTEFADKSLEEIVISAPAGGIFNNAAQVWNHTFYFNCMAPEAGGAPSGEIAAAIDAAFGSFEDFKTAFSTSAATNFGSGWTWLVKNADGGVEIFNTSNAGCPLTEGL-TPLLTIDVWEHAYYVDKRNARPAYVESWWNLVNWEFVNAQL 192
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|727070521|gb|KHF26505.1| (superoxide dismutase [Solemya velum gill symbiont]) HSP 1 Score: 261.536 bits (667), Expect = 2.434e-86 Identity = 128/194 (65.98%), Postives = 159/194 (81.96%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARL 193
M +LP LP++K+AL PHISAET+++H+ KHHA YVT LN +I + +A KS++EI+ +APAGG+FNNAAQVWNHTFY+N MAP AGGAPSG IA I+AAFGSF++FK+ FST+AA +FGSGW WLV DG +E+ +T +A PL EGL TPLLT DVWEHAYYVD RNARPAYVE+WW+LVNWE+ NA+L
Sbjct: 5 MQHQLPELPYEKSALEPHISAETLEFHHDKHHATYVTNLNNLI-EGTEFADKSLEEIVTSAPAGGIFNNAAQVWNHTFYFNCMAPEAGGAPSGEIAAAIDAAFGSFEDFKTAFSTSAATNFGSGWTWLVKNADGGVEIFNTSNAGCPLTEGL-TPLLTIDVWEHAYYVDKRNARPAYVESWWNLVNWEFVNAQL 196
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|759391039|ref|WP_043116282.1| (superoxide dismutase [Solemya velum gill symbiont] >gi|1152807813|gb|OOY35436.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152811467|gb|OOY38611.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152811971|gb|OOY38953.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152819035|gb|OOY43607.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152821131|gb|OOY45299.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152825105|gb|OOY48988.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152827391|gb|OOY51042.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152829072|gb|OOY52687.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152842893|gb|OOY65792.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152845001|gb|OOY67812.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152847596|gb|OOY70285.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152857874|gb|OOY80010.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152859671|gb|OOY81733.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152863887|gb|OOY85533.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152866214|gb|OOY87705.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152867533|gb|OOY88816.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152869786|gb|OOY90914.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152880028|gb|OOZ00571.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152882169|gb|OOZ02567.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152884709|gb|OOZ04973.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152887120|gb|OOZ07213.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152889480|gb|OOZ09395.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152891729|gb|OOZ11465.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152894953|gb|OOZ14475.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152896769|gb|OOZ16178.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152899727|gb|OOZ18944.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152901661|gb|OOZ20729.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152904246|gb|OOZ23164.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152905200|gb|OOZ24091.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152909907|gb|OOZ28543.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152911820|gb|OOZ30288.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152915215|gb|OOZ33464.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152917474|gb|OOZ35596.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152927335|gb|OOZ44094.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152934450|gb|OOZ50867.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152941143|gb|OOZ57143.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152947399|gb|OOZ63033.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152950151|gb|OOZ65618.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152952853|gb|OOZ68174.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152958447|gb|OOZ73411.1| superoxide dismutase [Solemya velum gill symbiont] >gi|1152960442|gb|OOZ75276.1| superoxide dismutase [Solemya velum gill symbiont]) HSP 1 Score: 261.151 bits (666), Expect = 3.882e-86 Identity = 128/194 (65.98%), Postives = 159/194 (81.96%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARL 193
M +LP LP++K+AL PHISAET+++H+ KHHA YVT LN +I + +A KS++EI+ +APAGG+FNNAAQVWNHTFY+N MAP AGGAPSG IA I+AAFGSF++FK+ FST+AA +FGSGW WLV DG +E+ +T +A PL EGL TPLLT DVWEHAYYVD RNARPAYVE+WW+LVNWE+ NA+L
Sbjct: 1 MQHQLPELPYEKSALEPHISAETLEFHHDKHHATYVTNLNNLI-EGTEFADKSLEEIVTSAPAGGIFNNAAQVWNHTFYFNCMAPEAGGAPSGEIAAAIDAAFGSFEDFKTAFSTSAATNFGSGWTWLVKNADGGVEIFNTSNAGCPLTEGL-TPLLTIDVWEHAYYVDKRNARPAYVESWWNLVNWEFVNAQL 192
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|1055495318|ref|WP_067154297.1| (superoxide dismutase [Fe] [Microbulbifer thermotolerans] >gi|1016272087|gb|AMX02978.1| superoxide dismutase [Microbulbifer thermotolerans] >gi|1097558161|emb|SFC72106.1| superoxide dismutase, Fe-Mn family [Microbulbifer thermotolerans]) HSP 1 Score: 259.996 bits (663), Expect = 1.042e-85 Identity = 121/195 (62.05%), Postives = 152/195 (77.95%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLA 194
MA ELP LP+ KNAL PHIS ET++YHYGKHH YV KLNG+++ P A KS++E++ + +GG+FNNAAQVWNHTFYWN ++PN GGAP+GP+A+ I+ AFGSFD FK +FST+A +FGSGW WLV K DG L +V+T +A PL E TPLLTCDVWEHAYY+DYRN RP Y+EA+W+LVNW++ N
Sbjct: 1 MAFELPELPYAKNALEPHISEETLEYHYGKHHKTYVDKLNGLLEGTPD-ADKSLEEVIKTS-SGGVFNNAAQVWNHTFYWNCLSPNGGGAPTGPVAEAIDKAFGSFDKFKEEFSTSAVNNFGSGWTWLVKKNDGTLAIVNTSNAGTPLTEADQTPLLTCDVWEHAYYIDYRNLRPKYLEAFWNLVNWDFVNQNFG 193
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|518441685|ref|WP_019611892.1| (superoxide dismutase [Thioalkalivibrio sp. AKL7]) HSP 1 Score: 259.61 bits (662), Expect = 1.561e-85 Identity = 122/194 (62.89%), Postives = 157/194 (80.93%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARL 193
MA ELP LP+ KNAL PHISAET++YH+ KHHA YVTKLNG++ + S+++I+ APAGG+FNN AQVWNHTFY+N MAPNAGG PSG +AD IN+AFGSFD FK +F+ +A G+FGSGW WLV DG +E+V+T +A+NPL++G TPLLTCDVWEHAYY+DYRNARP Y+E +W++VNW++A ++
Sbjct: 1 MAYELPDLPYAKNALEPHISAETLEYHHDKHHATYVTKLNGLLPGS-EFENASLEDIIRKAPAGGIFNNGAQVWNHTFYFNCMAPNAGGEPSGKLADAINSAFGSFDAFKEKFNESAVGNFGSGWTWLVQNDDGSVEIVNTSNAANPLRDG-KTPLLTCDVWEHAYYIDYRNARPKYLENFWAVVNWDFAAQQM 192
BLAST of EWM22517.1 vs. NCBI_GenBank
Match: gi|518423200|ref|WP_019593407.1| (superoxide dismutase [Thioalkalivibrio sp. ALM2T]) HSP 1 Score: 259.61 bits (662), Expect = 1.631e-85 Identity = 122/194 (62.89%), Postives = 157/194 (80.93%), Query Frame = 0
Query: 1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARL 193
MA ELP LP+ KNAL PHISAET++YH+ KHHA YVTKLNG++ + S+++I+ APAGG+FNN AQVWNHTFY+N MAPNAGG PSG +AD IN+AFGSFD FK +F+ +A G+FGSGW WLV DG +E+V+T +A+NPL++G TPLLTCDVWEHAYY+DYRNARP Y+E +W++VNW++A ++
Sbjct: 1 MAYELPDLPYAKNALEPHISAETLEYHHDKHHATYVTKLNGLLPGS-EFESASLEDIIKKAPAGGIFNNGAQVWNHTFYFNCMAPNAGGEPSGKLADAINSAFGSFDAFKEKFNESAVGNFGSGWTWLVQNSDGSVEIVNTSNAANPLRDG-KTPLLTCDVWEHAYYIDYRNARPKYLENFWAVVNWDFAAQQM 192 The following BLAST results are available for this feature:
BLAST of EWM22517.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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