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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100558g3.1625.mrna |
| Orig protein id | gnl|cribi|Naga_100558g3.1625 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:28211..31065 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8178 ID=rna8178|Name=rna8178|organism=Nannochloropsis gaditana|type=mRNA|length=666bp
ATGCCTGGAGCTACAGTCCGGCTTGTTAAGCTTCCTGCCCTCTTATTCGC
CATTTTCTTCCTTCTCGTCGCCTTCATCCATGTTTATGCTTCCAACATCG
AAGAAGACGTACTGGAGGGGAAAGATATTTCCAGCATGGTGGCACAAGGA
GAGGAATTGGTGAACTCACGAATGTTCACCGAGGCCAAGCTTGGCCGCGC
CCATGCATTCACAGGAAATTTTAAGGAGGCAGAGCGCCTCTATTCACAGG
CCTTGTCGTCGGACCCGTCTTTTGCGCCGGCTCACACCTCTCTTGGGAAG
CTGTACTTGTACCAGAAAGAAACGGCCCGAGCGTTGCAGGCGTTTGAAAA
AGCCTTAGAGCTCTCCCCAGGGGACGGAGACGCGCTCTTGGGCTTGGCAA
GGCTGGAAGCCCTCCAGGCTCACCAAGCAGGGGGCGAAGAGAGGCTGCAC
AAGGCGGCCGCATTGTACGCGGCGGCGGTGCGGACGTCTCCGGCGGACTC
CTACGAATCCGCCTGGTTCGACTACGGGGTGGTGCTGGGCCGCCTGGGGA
GACACGAGGAGGCGGCAGAGAAGCTGGAGCGTGCCGTGGCCATGAATGAG
GAGCAGATGAACTTCAACATGCTGGGCCAGGTCGGTCCTGTGGGCGGGGC
CTCCCTCAGTGCGTGA back to topprotein sequence of rna8178 >rna8178-protein ID=rna8178-protein|Name=rna8178|organism=Nannochloropsis gaditana|type=polypeptide|length=367bp
MKQMIQRRDHLEAMKHACARLLLRLVPFAPPMTRREETLLLHAHPSPAPL
QPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPIL
LVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPP
GGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAA
FAPPSSAPSPSPSPSALARGVKSLTLADPFVFAPGARSLPSLYSDRGAAV
PLCVTESVAGVKGGVKGGGEGGREDRVHYERQWEGLPELGKVGNRPIFLS
YGSTGEGEGSLDEVAVGRLRSRVEEGGREGGVVVKKFGSRLPHVDEPEAY
VDWLDELLQGTEKMRPA back to topmRNA from alignment at KK037248.1:28211..31065+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8178 ID=rna8178|Name=rna8178|organism=Nannochloropsis gaditana|type=mRNA|length=2855bp|location=Sequence derived from alignment at KK037248.1:28211..31065+ (Nannochloropsis gaditana)
AGCGTGGGCCAACAGGTAAGAATAGAGTAGGGCGCAGACAACCAACACGT
GGTCACATTTTGGCCACAGacgtcttttccctcttctcctcctgcacgtt
GCCTGTACCATTGTCGCCGTGGCTATTTGAGGATGTGAGTAATGTGCGGG
TACGGATGAGACAGTCAGTTGAAGTTGTCGGAGTGTCTCCGATGGGGTTG
CGGAGGCTGTAAGCTTAGTTCTTTCACTTTATCCCACGTCGAGACCGAGA
AGTACATAACATTTGTGGCGCCTAAGGTTGATTGCGACCCGCGTTGGTCG
ACAGAGCCAGCACTAGTGCACCACCACTGTAAACGGAAGGGGATAcagga
cctcctcccccgacccGGGCAACACGCGCATACGAGCCCCCTTTCGATAC
CAAAATAATTACACAAAATGTTTCATGAAAAGAAATATAAGAATCCCTTT
TTGCTCTTCGAATAGGAAGAGGCCCATTCCAAATTACAATTGCACCAGAA
CTCACTTAGTTTCACTATTCCATTCCTGCTAGAGCACCATGTCCGCTTTC
AGACcggcccctcctcgacctccatTACGTCGTAGCAGCCTTTTtttgct
ccttctccgcctctctctgCCCGCCAACGCTTTCATCATGTCCTGTAGAG
AGACAGGGTCGGCCccggcttctccttcccccctcattGTCCgcgctgcc
ccctcctccgtggctGGCCTCCATGCGCGCAAAAGCCTCTTTACACAAGC
GGGTAGCGTCCTTCTCGGCGCATCGGTCCTGGGAAAAGCCCCCCGCAAGG
CCCAGGCATGGTGTGGCAAGGTATGCTAACGGGTGCATCCGGTCGAGAGG
GTTGGGAGAGTGATAGAAATGGTGCCCTGAGTGGTGAAAGGCAGGATGTC
GCCAATGACCGGTTACCTCGTCCCCAGTGCCCGAGAGTCATTTAAACCAG
CACGTACGCCGTCCTCTCTTGGAGGATGAAGCAAATGATTCAGCGTCGGG
ATCATTTGGAAGCGATGAAACACGCAtgtgcccgcctcctcctgcgcctc
gtCCCGTTCGCTCCCCCGATGactcggagggaggagactctccttctcca
tgctcatccatcccccgcccccctacAGCCATACCCCCCCTGGGCCTACC
GCCTTCGGTTCAACGACGGCCTcatccccgtctccctccccggcatGCCC
GCGCCTGCCGACCTCTTCTTGCGCGTGGTTGGGGATGaacagaaggagaa
ggaccaGGGTCTtgcccccatcctcctcgtgccCGGCGGGCCCGGGCTGG
CGCACGACTACACCGAGACCTTGGAGGCTCTCGTCTACGGCGACCGCCGC
GTGGTCAGTTTCGACCCGGTCGGCACCGGGCAGTCCagccgctcccttcc
ccccgccctcgccgacgggcccccggggggggcggagaccGCCGAGTGGA
AGCAAGCCTGGAGTGCGCTTTTGCAGGAGCAACTCCGGGAAATCCTTCGG
TTTCTAGAAATCGACTCGCACCACGTCTGGGCCCAAGGCGCAGCAtgcct
cccggccctccaGCACACTGCCGcctttgcccccccttcctctgccccct
ccccctctccctccccctccgccttggcccgGGGCGTCAAGTCCTTGACC
CTCGCGGACCCCTTCGTCTTCGCCCCCGGGGCCCGaagcctcccttccct
ctacTCCGACCGGGGCGCGGCTGTTCCCCTCTGCGTCACCGAGTCCGTGG
CCGGGGTGAAGGGCGGGgtgaagggcgggggggagggcgggagggaggac
agggtgcATTACGAGAGGCAATGGGAGGGGTTGCCGGAGCttgggaaggt
gggaaatCGGCCCATATTCCTCAGCTACGGCAgcacgggggaaggggaag
ggagtcTGGACGAGGTGGCAGTCGGGCGCCTGAGAAgccgggtggaggag
ggaggaagggagggaggggtggtggtcAAGAAATTTGGAAGCCGCTTGCC
GCATGTGGACGAGCCTGAGGCCTACGTGGACGTGAGTGGGatagaaagga
ggaggagaaggggagggaggggggaaggcgggtggTCAAGACCTGCAGCC
TGTggggctctcctccctcatacCCTTGGACTTACGAACCCGAGTCTCAT
CGGCctttttcccgtccctccctccctcttgatcggcctttcctccgtcc
tttccctcccacagtGGCTGGATGAATTGCTACAGGGCACCGAGAAGATG
CGGCCggcgtgagggaaaggatgagggaagaggaggagtgaggggacagg
aagggagctTCCCGGGACGATGTTGACGCATgcgagggatggggagggaa
ggggagtgaggaagagggcggagggagggcacaaaAGGTtccgaggacga
ggtggctTATAGGCAGGAGCAGCAAGCACGATGACGACagggttggagga
gggtagCTGACGGTGGCGAAAGCGAGACATGCTTCCTGAGGGAACTCtct
cgagggagggaggaggagaatcttgatggtggagggagggggagggagcg
aaggagggcagggggtggagggtgggatCAAAGACGAAGGCATGGGAagg
gcgacggcgggagggtTGataaggaaagaaggggtgatgagaaaggaagg
acgagggagaggagcggagggcaggcgtgggcggaggaaggggactgggc
gaggggcagggacgacaagagaggggagaaagcgagagggaagatCGAGG
AGACCCAACGCCGGAGAGCAGGCGCCCGAGAGAAAAGGCTCAGACGTTCC
TTGCGTgatgaggcgggagggaaaggaagattCGGGACCCTCTTCAACGA
CCCCC back to topCoding sequence (CDS) from alignment at KK037248.1:28211..31065+ >rna8178 ID=rna8178|Name=rna8178|organism=Nannochloropsis gaditana|type=CDS|length=2208bp|location=Sequence derived from alignment at KK037248.1:28211..31065+ (Nannochloropsis gaditana)
ATGAAGCAAATGATTCAGCGTCGGGATCATTTGGAAGCGATGAAACACGC
AtgtgcccgcctcctcctgcgcctcgtCCCGTTCGCTCCCCCGATGactc
ggagggaggagactctccttctccatgctcatccatcccccgccccccta
cAGCCATACCCCCCCTGGGCCTACCGCCTTCGGTTCAACGACGGCCTcat
ccccgtctccctccccggcatGCCCGCGCCTGCCGACCTCTTCTTGCGCG
TGGTTGGGGATGaacagaaggagaaggaccaGGGTCTtgcccccatcctc
ctcgtgccCGGCGGGCCCGGGCTGGCGCACGACTACACCGAGACCTTGGA
GGCTCTCGTCTACGGCGACCGCCGCGTGGTCAGTTTCGACCCGGTCGGCA
CCGGGCAGTCCagccgctcccttccccccgccctcgccgacgggcccccg
gggggggcggagaccGCCGAGTGGAAGCAAGCCTGGAGTGCGCTTTTGCA
GGAGCAACTCCGGGAAATCCTTCGGTTTCTAGAAATCGACTCGCACCACG
TCTGGGCCCAAGGCGCAGCAtgcctcccggccctccaGCACACTGCCGcc
tttgcccccccttcctctgccccctccccctctccctccccctccgcctt
ggcccgGGGCGTCAAGTCCTTGACCCTCGCGGACCCCTTCGTCTTCGCCC
CCGGGGCCCGaagcctcccttccctctacTCCGACCGGGGCGCGGCTGTT
CCCCTCTGCGTCACCGAGTCCGTGGCCGGGGTGAAGGGCGGGgtgaaggg
cgggggggagggcgggagggaggacagggtgcATTACGAGAGGCAATGGG
AGGGGTTGCCGGAGCttgggaaggtgggaaatCGGCCCATATTCCTCAGC
TACGGCAgcacgggggaaggggaagggagtcTGGACGAGGTGGCAGTCGG
GCGCCTGAGAAgccgggtggaggagggaggaagggagggaggggtggtgg
tcAAGAAATTTGGAAGCCGCTTGCCGCATGTGGACGAGCCTGAGGCCTAC
GTGGACtGGCTGGATGAATTGCTACAGGGCACCGAGAAGATGCGGCCggc
gtgaATGAAGCAAATGATTCAGCGTCGGGATCATTTGGAAGCGATGAAAC
ACGCAtgtgcccgcctcctcctgcgcctcgtCCCGTTCGCTCCCCCGATG
actcggagggaggagactctccttctccatgctcatccatcccccgcccc
cctacAGCCATACCCCCCCTGGGCCTACCGCCTTCGGTTCAACGACGGCC
TcatccccgtctccctccccggcatGCCCGCGCCTGCCGACCTCTTCTTG
CGCGTGGTTGGGGATGaacagaaggagaaggaccaGGGTCTtgcccccat
cctcctcgtgccCGGCGGGCCCGGGCTGGCGCACGACTACACCGAGACCT
TGGAGGCTCTCGTCTACGGCGACCGCCGCGTGGTCAGTTTCGACCCGGTC
GGCACCGGGCAGTCCagccgctcccttccccccgccctcgccgacgggcc
cccggggggggcggagaccGCCGAGTGGAAGCAAGCCTGGAGTGCGCTTT
TGCAGGAGCAACTCCGGGAAATCCTTCGGTTTCTAGAAATCGACTCGCAC
CACGTCTGGGCCCAAGGCGCAGCAtgcctcccggccctccaGCACACTGC
CGcctttgcccccccttcctctgccccctccccctctccctccccctccg
ccttggcccgGGGCGTCAAGTCCTTGACCCTCGCGGACCCCTTCGTCTTC
GCCCCCGGGGCCCGaagcctcccttccctctacTCCGACCGGGGCGCGGC
TGTTCCCCTCTGCGTCACCGAGTCCGTGGCCGGGGTGAAGGGCGGGgtga
agggcgggggggagggcgggagggaggacagggtgcATTACGAGAGGCAA
TGGGAGGGGTTGCCGGAGCttgggaaggtgggaaatCGGCCCATATTCCT
CAGCTACGGCAgcacgggggaaggggaagggagtcTGGACGAGGTGGCAG
TCGGGCGCCTGAGAAgccgggtggaggagggaggaagggagggaggggtg
gtggtcAAGAAATTTGGAAGCCGCTTGCCGCATGTGGACGAGCCTGAGGC
CTACGTGGACtGGCTGGATGAATTGCTACAGGGCACCGAGAAGATGCGGC
Cggcgtga back to top
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