EWM22518.1, cds8154 (CDS) Nannochloropsis gaditana

Overview
NameEWM22518.1
Unique Namecds8154
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:29186..30241 +
Alignment locationKK037248.1:30425..30472 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22518.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100558g3.1625.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:29186..30241 +
KK037248.1supercontigKK037248.1:30425..30472 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
Homology
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|585103031|gb|EWM22518.1| (hypothetical protein Naga_100558g3 [Nannochloropsis gaditana])

HSP 1 Score: 731.865 bits (1888), Expect = 0.000e+0
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query:    1 MKQMIQRRDHLEAMKHACARLLLRLVPFAPPMTRREETLLLHAHPSPAPLQPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAPPSSAPSPSPSPSALARGVKSLTLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAGVKGGVKGGGEGGREDRVHYERQWEGLPELGKVGNRPIFLSYGSTGEGEGSLDEVAVGRLRSRVEEGGREGGVVVKKFGSRLPHVDEPEAYVDWLDELLQGTEKMRPA 367
            MKQMIQRRDHLEAMKHACARLLLRLVPFAPPMTRREETLLLHAHPSPAPLQPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAPPSSAPSPSPSPSALARGVKSLTLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAGVKGGVKGGGEGGREDRVHYERQWEGLPELGKVGNRPIFLSYGSTGEGEGSLDEVAVGRLRSRVEEGGREGGVVVKKFGSRLPHVDEPEAYVDWLDELLQGTEKMRPA
Sbjct:    1 MKQMIQRRDHLEAMKHACARLLLRLVPFAPPMTRREETLLLHAHPSPAPLQPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAPPSSAPSPSPSPSALARGVKSLTLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAGVKGGVKGGGEGGREDRVHYERQWEGLPELGKVGNRPIFLSYGSTGEGEGSLDEVAVGRLRSRVEEGGREGGVVVKKFGSRLPHVDEPEAYVDWLDELLQGTEKMRPA 367          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|299472207|emb|CBN77177.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 93.9745 bits (232), Expect = 1.988e-18
Identity = 76/225 (33.78%), Postives = 109/225 (48.44%), Query Frame = 0
Query:   60 LRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPP--ALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAPPSSAPSPSPSPSALARGVKSLTLADPFV----FAPG-ARSLPSLYSDRGAAVPLCVTESVAG-VKGGVKGGGEGGREDR 276
            + F++  IP    G      LF R VG+ + +K     P++++PGGPGL HDY ETLE     DR V+ FDPVGTG SS +LP   A AD P             +A L  Q R ++ + ++++ HV   G +   AL+   +    S  P P P P A    V S+ LA P +     +P    +L + Y   G   PLC+  ++AG    G  GG    ++DR
Sbjct:    1 MDFDEVFIPFKFEGYSG--KLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETLEGAAMEDRVVLLFDPVGTGNSS-ALPSVDAAADSP---------NLLGTASLVAQTRAVVDYFKVNAFHVLGHGTSAEAALELGRSLGKASPRP-PGPEPEA----VLSVILASPVLGENELSPDFLEALRTPYIKDGNEPPLCLETAMAGRSSDGFAGGLAAMKQDR 208          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|922862537|gb|KOO30126.1| (hypothetical protein Ctob_012499 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-11
Identity = 62/186 (33.33%), Postives = 89/186 (47.85%), Query Frame = 0
Query:   51 QPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLE------IDSHHVWAQGAACLPALQHTAAFAPPSSAPSPSPSPSALARGVKSLTLADPF 230
            +P P WA+ L+++   +P    G  A A +  RVVGD  +E+  G+ P++++ G PG  +DY ETLEAL   DRRV      GT  +   LPP L         TA+          EQ+R + R L+        + H+ A G   +PAL+  A             S +A A GV+SLTL  P+
Sbjct:   36 EPVPSWAFYLQWDQTALPFEYQG--ASAQVRYRVVGDIVRERKAGVPPVVVI-GTPGFGYDYLETLEALTVSDRRVAMVILAGTA-AGEDLPPVL--------RTAD-------ACAEQIRAVCRALKPAALGGKPAVHLVAHGLGAVPALRVLA-------------SSAADAIGVRSLTLISPW 189          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|551590607|ref|XP_005779667.1| (hypothetical protein EMIHUDRAFT_205238 [Emiliania huxleyi CCMP1516] >gi|485632187|gb|EOD27238.1| hypothetical protein EMIHUDRAFT_205238 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 72.0182 bits (175), Expect = 1.203e-10
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   51 QPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALAD 147
            +  P WA+ ++++DG +P    G  A  + + RVVGD  +E   G+ PILLV G PGL +DY E LEAL   DRRVV     GT  ++ S P   AD
Sbjct:   27 EAVPSWAFFVKWDDGRVPFEWEG--AKGEAYCRVVGDRAREAKAGVPPILLV-GTPGLGYDYLENLEALTVSDRRVVEVVFAGTNGAA-SAPLLTAD 119          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|303271507|ref|XP_003055115.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226463089|gb|EEH60367.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 71.633 bits (174), Expect = 4.060e-10
Identity = 49/150 (32.67%), Postives = 69/150 (46.00%), Query Frame = 0
Query:   54 PPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADG-----PPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHT 198
            P WA++  +++G + VS       A  FLRV+G +    +    P+L + GGPGL   Y E  E L    R V S+D +G  +S  +L P L+DG     PP G  T E       L   +L  I     +D  H+ A G   + AL H 
Sbjct:  100 PQWAFKTPWSEGFVDVSNATKIPDAKTFLRVLGSQAVASEANHLPVLCLHGGPGLGFKYMEACEVLASERREVASYDQIGCARS--ALKPRLSDGAVRAPPPPGTFTPE-------LFDAELTAIREAAGLDRVHIVAHGWGAMLALDHA 240          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|255080510|ref|XP_002503835.1| (predicted protein [Micromonas commoda] >gi|226519102|gb|ACO65093.1| predicted protein [Micromonas commoda])

HSP 1 Score: 67.0106 bits (162), Expect = 1.339e-8
Identity = 48/155 (30.97%), Postives = 70/155 (45.16%), Query Frame = 0
Query:   54 PPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQS-----------SRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQH 197
            P WA    +++G +  S       A  F+R++GD++K +  GL P+L + GGPGL   Y + LE L    R V S+D +G  +S           ++    A A  PP G  T        AL   +L E+ R   +   HV A G   + AL H
Sbjct:   96 PQWARETPWSEGYVDTSAAVGLEGAKTFVRILGDQKKAESAGLTPVLCLHGGPGLGFKYMDGLEVLASEKREVASYDQIGCARSPYAPTKKNQNQNQIQTAAAALSPPPGTYT-------PALFGRELTEVRRATGLGRVHVVAHGWGGMLALDH 243          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|769922959|ref|WP_045057329.1| (hypothetical protein [Aliterella atlantica] >gi|768383201|gb|KJH69343.1| hypothetical protein UH38_24450 [Aliterella atlantica CENA595])

HSP 1 Score: 63.1586 bits (152), Expect = 1.583e-7
Identity = 67/297 (22.56%), Postives = 122/297 (41.08%), Query Frame = 0
Query:   91 EKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAPPSSAPSPSPSPSALARGVKSL----------------------TLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAGVKGGVKGGGEGGREDRVHYERQWEGLPELGKVGNRPIFLSYGSTGEGEGSLDEVAVGRLRSRVEEGGREGGVVVKKFGSRLPHVDEPEAYVDWLDELLQGTEKMR 365
             ++ G  P+L + GGPG+ HDY + LEAL +  RR++ +D +G G S R+    L         + +W        +++L  I R L+++  H++ Q      AL+HT + A   ++   + +P+++ + V                         T  DP  +          +  R    P C+T++ +  K G +  G G   D       W     L ++    + LS        G  D+V    +   +++G      V+ +  S +PH++E E ++  L+E L   E  R
Sbjct:   28 NEESGKLPLLCLHGGPGIPHDYLQPLEALAHTGRRIIFYDQLGCGNSDRAKNADLY--------SIDW-------FKDELVAIRRELDLEQIHLFGQSWGGCLALEHTLSQATGLASLVLANTPASVRQFVDEAYRLMNELPADIKEMIHKHETAGTTQDP-DYKQAIEVFSHCFLCRLDPYPSCLTQAYS--KAGTEFRGAGKIID-------WSVEDRLSEISVPTLLLS--------GRYDQVTPACVEP-LKQGISGSEWVLFENSSHMPHLEETEGFLQVLEEFLNRVEHDR 290          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|654809987|ref|WP_028263308.1| (proline iminopeptidase [Atopobium fossor])

HSP 1 Score: 61.6178 bits (148), Expect = 4.757e-7
Identity = 38/123 (30.89%), Postives = 58/123 (47.15%), Query Frame = 0
Query:   81 FLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAP 203
            + R+VG          API+L+ GGPG  H+Y E L++L    R V+S+D +G GQS         DG P   +   W         ++LR ++ +L I   H+  Q    + AL + A + P
Sbjct:   18 YYRIVGTWTAHTTPKHAPIILLHGGPGSTHNYMELLDSLADDGRAVISYDQLGCGQS-------FVDGHPELWQAQTWV--------DELRALVEYLGITEFHLLGQSWGGMLALTYLADYQP 125          
BLAST of EWM22518.1 vs. NCBI_GenBank
Match: gi|511748247|ref|WP_016383398.1| (proline iminopeptidase [Lactobacillus paracasei] >gi|511382329|gb|EPC21343.1| Proline iminopeptidase [Lactobacillus paracasei subsp. paracasei Lpp122])

HSP 1 Score: 60.4622 bits (145), Expect = 9.599e-7
Identity = 46/166 (27.71%), Postives = 77/166 (46.39%), Query Frame = 0
Query:   81 FLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAP---PSSAPSPSPSPSAL-----ARGVKSLTLADPFVFAPGARS 238
            + R+VG+   +K    AP+LL+ GGPG +H+Y E ++     DR+++ +D VG G+SS    PA+             K+ W+    E+L  + ++L +D  H+  Q    +  + +  +F P    S     SPS   L      R +K L+  D    A   R+
Sbjct:   16 YYRIVGEPSADK----APLLLIHGGPGSSHNYFELMDDYAETDRQLIMYDQVGCGKSSLPEDPAVY-----------VKETWA----EELIALRKYLHLDELHMLGQSWGGMLEMYYLTSFDPQGIKSVMIDGSPSSIKLWIQEQHRLIKYLSYEDREAIAEAERT 162          
The following BLAST results are available for this feature:
BLAST of EWM22518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 9
Match NameE-valueIdentityDescription
gi|585103031|gb|EWM22518.1|0.000e+0100.00hypothetical protein Naga_100558g3 [Nannochloropsi... [more]
gi|299472207|emb|CBN77177.1|1.988e-1833.78expressed unknown protein [Ectocarpus siliculosus][more]
gi|922862537|gb|KOO30126.1|4.198e-1133.33hypothetical protein Ctob_012499 [Chrysochromulina... [more]
gi|551590607|ref|XP_005779667.1|1.203e-1043.30hypothetical protein EMIHUDRAFT_205238 [Emiliania ... [more]
gi|303271507|ref|XP_003055115.1|4.060e-1032.67predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|255080510|ref|XP_002503835.1|1.339e-830.97predicted protein [Micromonas commoda] >gi|2265191... [more]
gi|769922959|ref|WP_045057329.1|1.583e-722.56hypothetical protein [Aliterella atlantica] >gi|76... [more]
gi|654809987|ref|WP_028263308.1|4.757e-730.89proline iminopeptidase [Atopobium fossor][more]
gi|511748247|ref|WP_016383398.1|9.599e-727.71proline iminopeptidase [Lactobacillus paracasei] >... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8178rna8178Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications