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Properties
| Property Name | Value |
|---|
| Product | glutamyl-trna b subunit |
| Orig transcript id | gnl|cribi|Naga_100769g1.4211.mrna |
| Orig protein id | gnl|cribi|Naga_100769g1.4211 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:22051..24431 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8176 ID=rna8176|Name=rna8176|organism=Nannochloropsis gaditana|type=mRNA|length=788bp
GGTTGACCCGAGCAGATTTTGATCGAGAGCTCTTGGACTGGGATTTCCTC
GCGGCGTGGGAGGAAGAAACCAAACCTCCTTCCTCCTCCTCGGTCGCCGC
CTCCCCCCCTGCCCCAGCCTCGCACGCTAGGGAGGGGCAAAAGACGCTGG
GCTTAAGAAGGAAGATGGAAAGAAGGGGGAAAAGGAGTCCGGGCTGAAAA
GCGAAGGATCTAGTCTCGGAGAGGGCCACAAACGCGTGGAGAAGGAGAAG
CAGGACGGGGCGGGTGGGGGCGGGGGCTGGACGCCAGTGCCGGATACGTT
CACTGACGCCATACATTATGTGCGGGTCTGGTTCCCGCTACTTCTGCAAG
AAATGCGCGCAGAGACTTTGAACGAGGTTGGAGTGGAAGGCGTGGGGCCT
TTTAGCAAGGTCGAGGTGGAAGCGCAAGGCGGCGGGGAGGGAGGGAAAGG
GCTGGAGACGTTGCGAGTTTTGAAATTTGAAAATTTAACGGCCCAGGAGC
AGCAAACGCAGCAGGCGCTGGGGGGAGGCGGGGGAAGCGATAGGAGGAAG
CTTCGAGATTGTTACCAATGGGACTTGGTGCTCCTGGTTCGGCGCATGGA
GCCAGTGTGGGAGGCCGTCGGCCGGGCGAAAGGGTTCAAGCGGGCCCTCC
CCCCGCCCTCCCCCCGCCCTTTCCCCCGCTGCCGAGGCGGTGGAGGACGG
TGAAGTCGTTCCACCTTCTCCCCCCTCCCTTCCCCCCCCGCTCCCACTCT
CGCAGGCACACGGGCTGATTGCCGTGTCGCACCCTTTC back to topprotein sequence of rna8176 >rna8176-protein ID=rna8176-protein|Name=rna8176|organism=Nannochloropsis gaditana|type=polypeptide|length=553bp
MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQIT
QQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDPEEAAWP
PFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSS
PSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAPPSPAFPPG
PWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQD
LSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPL
VLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFF
EDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSS
PALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGG
SEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSAR
QRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLRVELRKAEEEEM
GGK back to topmRNA from alignment at KK037248.1:22051..24431+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8176 ID=rna8176|Name=rna8176|organism=Nannochloropsis gaditana|type=mRNA|length=2381bp|location=Sequence derived from alignment at KK037248.1:22051..24431+ (Nannochloropsis gaditana)
CCCTGGCGCGTTTTGTGCCaaaatggcggcggcggccggcAAATTCAGAG
CCGCAAGCGGCAGGATTTGGGAGGTTAGTGACGGAGGCCGATGATAGTTG
TTGAGTGCATGTCACTTGCTGTATGCGAAGCGGAGGGCAATGAAAATCAA
TTCGTCACGTAAACATACACCATAGGCGTGCATTGGCTTGGAAGTCCACG
CGCAAATCCGGGTGCGAAGCAAGCTCTTTTCAGGGGCCTCGGCGCAGGTC
ACAGACTACGATCGACCCAACACGCGCGTAGGCCTATTAGATGCCGCAAT
GCCAGGTAGACACAAGAGAAGTGGTGGTAGATAGAGGAAAGTTGGTGGGG
CTGTGGGTTGGAATAAAAGggacaggaaaggaagaggtcgtGCAGAGAGC
GTTCAggtgcaggggggggaagtccCGGTCCTGGTGGGACATAATAATAG
TCAGTCGCTCGCCTCATAAGGGAGGCCGATAGAAGATGAGAAGGGGTGGC
TGCACGGCCTCTCGAATCAGTAGTCAGGCCCTGAAGTCTTGCCCCATCTC
CCATTTTCTCCTCGCACCCGCGCGCCCCGGCCTaaagcttcctctccccg
tcccccttcttccagggaCCCTGCCTGTCCTCAACAAGGAGGCTGTGCAC
CAATCCCTCCGgaccgccctcgccctcggctGCCAAGTCCATCCGGTCTC
CCGTTTCGAGCGCAAGCACTATTTCTATTGCGACCTGCCACAGGGGTACC
AGATCACGCAGCAGGCATCGCCCATTGCCACCGGGTGAGCCTCGCGCCCC
CAATCGAAAGCTTTCGCGCCTTCCGGTCGATCGtcccctcacccccctcc
ctccctccctccctccctccctcccttcctccctccctccctcagcggCT
CCCTTCTGGTAGAGCCCCCCCTCCACGAAAACCAACGGCAGCGAGCGCCC
AGGAAGAGAAACGCGTCCTCCCCACACCCCGGACTCGAGGGAGACGACCC
GGAGGAAGCCGCCTGGCCCCCCTTCCGCGTGCGCATAGCCCGCCTCCAGA
TCGAACAGGACTCGGGGAAGTCTACGCACGActcggcgggagggaggcac
acCCTTGTGGACCTGAAcagggcgggcgtggccctGATGGAGATCGTCTT
CGAGCCTGAGCTCTCCAGCCCATCCCAAGCAGCTGCTTGCCTTCGGAGTT
TACAGGCCACGCTCCGCGCCCTGGACTCCTGCGACGgcctgatggaggag
ggctcCCTCCGCTGCGATTTGAACGTGTCGGTGcggcccgcccctccctc
ccccgcctttcccccggggCCCTGGGGGCCTCGGGTGGAAGTCAAAAATT
TAAATTCCTTGAAAGCGCTGCAAACGGCCGCGGCGTTTGAAATTCAACGG
CAGATCGCCCTCCACGACCCCGGCGACGCCTCGCGGGCGGGCATGGCCGG
GACCGAGGGTGGACAGGACCTCAGCCGTTTCAACGGCCATTTCGAATTCA
AATCGGTGGAACGGGAGACTCGGGCGTTCAACGCGGCGACGGGCGAAACG
ACGCGGATgcgtggaaaggaaggagcagtGGACTACCGTTTTTTTCCGga
gcccgacctcccccccctggtGCTGGACATGGACTGGGTGGAGGCAGTGA
GACGAGGCCTGCCGGAGTTGCCGCAGGCGACCCGATCGAGGCTCGTGGAG
GAGCATGGCCTGACGCCGGCGCAGGCAGAGGTCCTgatcggggaggggga
ggcggccgtgggTTTTTTTGAGGACGTGgtgcggggcgggggagggaggg
aggggagaggggtagCCAATTGGGTGTGCAACGACTTGATAGGGTTGGTA
AAGGCGAAAGCGTCAgctggcaagggagggaagggttgTGCAgtcgtcgc
ctccccctacacctcctctcctgccttgaCGGGACAGGCAGGGGCGTCTC
CCACAGCCAGCTATGCCGTCCATCCCGAGGCGATGGGCGAGTTGATCGAC
ATGGTGTCTGGTGGAGAGATCTCCATCCGGACGGGAAAAGAAGTGCTGGC
CCTGATGGTggcaggagggagtgaagacgaggagggaggagggagggggg
gggagaagcgaCAGAGGCCGCGGGAGATTGTGGCGGCGCGAGGGTGGGGA
CAGGTGAGCGACGAGACTGTGCTGATCGGGGTGGCGAGGAACGTGGTGAG
GGACCCCGGGAGTGCACGGCAGCGACGGCAGtacaaggaaggaaaagaga
agcaGATGATGAAGTTCTTTGTCGGGCAGGCGATGAAGGAGACAGGGGGA
CGGGCGCACCCGGGGAGAATGGAAACGTTGCTGAGGGTGGAGCTgcgcaa
ggcggaggaggaggagatgggagggaaatga back to topCoding sequence (CDS) from alignment at KK037248.1:22051..24431+ >rna8176 ID=rna8176|Name=rna8176|organism=Nannochloropsis gaditana|type=CDS|length=4986bp|location=Sequence derived from alignment at KK037248.1:22051..24431+ (Nannochloropsis gaditana)
ATGCCAGggaCCCTGCCTGTCCTCAACAAGGAGGCTGTGCACCAATCCCT
CCGgaccgccctcgccctcggctGCCAAGTCCATCCGGTCTCCCGTTTCG
AGCGCAAGCACTATTTCTATTGCGACCTGCCACAGGGGTACCAGATCACG
CAGCAGGCATCGCCCATTGCCACCGGcggCTCCCTTCTGGTAGAGCCCCC
CCTCCACGAAAACCAACGGCAGCGAGCGCCCAGGAAGAGAAACGCGTCCT
CCCCACACCCCGGACTCGAGGGAGACGACCCGGAGGAAGCCGCCTGGCCC
CCCTTCCGCGTGCGCATAGCCCGCCTCCAGATCGAACAGGACTCGGGGAA
GTCTACGCACGActcggcgggagggaggcacacCCTTGTGGACCTGAAca
gggcgggcgtggccctGATGGAGATCGTCTTCGAGCCTGAGCTCTCCAGC
CCATCCCAAGCAGCTGCTTGCCTTCGGAGTTTACAGGCCACGCTCCGCGC
CCTGGACTCCTGCGACGgcctgatggaggagggctcCCTCCGCTGCGATT
TGAACGTGTCGGTGcggcccgcccctccctcccccgcctttcccccgggg
CCCTGGGGGCCTCGGGTGGAAGTCAAAAATTTAAATTCCTTGAAAGCGCT
GCAAACGGCCGCGGCGTTTGAAATTCAACGGCAGATCGCCCTCCACGACC
CCGGCGACGCCTCGCGGGCGGGCATGGCCGGGACCGAGGGTGGACAGGAC
CTCAGCCGTTTCAACGGCCATTTCGAATTCAAATCGGTGGAACGGGAGAC
TCGGGCGTTCAACGCGGCGACGGGCGAAACGACGCGGATgcgtggaaagg
aaggagcagtGGACTACCGTTTTTTTCCGgagcccgacctcccccccctg
gtGCTGGACATGGACTGGGTGGAGGCAGTGAGACGAGGCCTGCCGGAGTT
GCCGCAGGCGACCCGATCGAGGCTCGTGGAGGAGCATGGCCTGACGCCGG
CGCAGGCAGAGGTCCTgatcggggagggggaggcggccgtgggTTTTTTT
GAGGACGTGgtgcggggcgggggagggagggaggggagaggggtagCCAA
TTGGGTGTGCAACGACTTGATAGGGTTGGTAAAGGCGAAAGCGTCAgctg
gcaagggagggaagggttgTGCAgtcgtcgcctccccctacacctcctct
cctgccttgaCGGGACAGGCAGGGGCGTCTCCCACAGCCAGCTATGCCGT
CCATCCCGAGGCGATGGGCGAGTTGATCGACATGGTGTCTGGTGGAGAGA
TCTCCATCCGGACGGGAAAAGAAGTGCTGGCCCTGATGGTggcaggaggg
agtgaagacgaggagggaggagggagggggggggagaagcgaCAGAGGCC
GCGGGAGATTGTGGCGGCGCGAGGGTGGGGACAGGTGAGCGACGAGACTG
TGCTGATCGGGGTGGCGAGGAACGTGGTGAGGGACCCCGGGAGTGCACGG
CAGCGACGGCAGtacaaggaaggaaaagagaagcaGATGATGAAGTTCTT
TGTCGGGCAGGCGATGAAGGAGACAGGGGGACGGGCGCACCCGGGGAGAA
TGGAAACGTTGCTGAGGGTGGAGCTgcgcaaggcggaggaggaggagatg
ggagggaaatgaATGCCAGggaCCCTGCCTGTCCTCAACAAGGAGGCTGT
GCACCAATCCCTCCGgaccgccctcgccctcggctGCCAAGTCCATCCGG
TCTCCCGTTTCGAGCGCAAGCACTATTTCTATTGCGACCTGCCACAGGGG
TACCAGATCACGCAGCAGGCATCGCCCATTGCCACCGGcggCTCCCTTCT
GGTAGAGCCCCCCCTCCACGAAAACCAACGGCAGCGAGCGCCCAGGAAGA
GAAACGCGTCCTCCCCACACCCCGGACTCGAGGGAGACGACCCGGAGGAA
GCCGCCTGGCCCCCCTTCCGCGTGCGCATAGCCCGCCTCCAGATCGAACA
GGACTCGGGGAAGTCTACGCACGActcggcgggagggaggcacacCCTTG
TGGACCTGAAcagggcgggcgtggccctGATGGAGATCGTCTTCGAGCCT
GAGCTCTCCAGCCCATCCCAAGCAGCTGCTTGCCTTCGGAGTTTACAGGC
CACGCTCCGCGCCCTGGACTCCTGCGACGgcctgatggaggagggctcCC
TCCGCTGCGATTTGAACGTGTCGGTGcggcccgcccctccctcccccgcc
tttcccccggggCCCTGGGGGCCTCGGGTGGAAGTCAAAAATTTAAATTC
CTTGAAAGCGCTGCAAACGGCCGCGGCGTTTGAAATTCAACGGCAGATCG
CCCTCCACGACCCCGGCGACGCCTCGCGGGCGGGCATGGCCGGGACCGAG
GGTGGACAGGACCTCAGCCGTTTCAACGGCCATTTCGAATTCAAATCGGT
GGAACGGGAGACTCGGGCGTTCAACGCGGCGACGGGCGAAACGACGCGGA
TgcgtggaaaggaaggagcagtGGACTACCGTTTTTTTCCGgagcccgac
ctcccccccctggtGCTGGACATGGACTGGGTGGAGGCAGTGAGACGAGG
CCTGCCGGAGTTGCCGCAGGCGACCCGATCGAGGCTCGTGGAGGAGCATG
GCCTGACGCCGGCGCAGGCAGAGGTCCTgatcggggagggggaggcggcc
gtgggTTTTTTTGAGGACGTGgtgcggggcgggggagggagggaggggag
aggggtagCCAATTGGGTGTGCAACGACTTGATAGGGTTGGTAAAGGCGA
AAGCGTCAgctggcaagggagggaagggttgTGCAgtcgtcgcctccccc
tacacctcctctcctgccttgaCGGGACAGGCAGGGGCGTCTCCCACAGC
CAGCTATGCCGTCCATCCCGAGGCGATGGGCGAGTTGATCGACATGGTGT
CTGGTGGAGAGATCTCCATCCGGACGGGAAAAGAAGTGCTGGCCCTGATG
GTggcaggagggagtgaagacgaggagggaggagggagggggggggagaa
gcgaCAGAGGCCGCGGGAGATTGTGGCGGCGCGAGGGTGGGGACAGGTGA
GCGACGAGACTGTGCTGATCGGGGTGGCGAGGAACGTGGTGAGGGACCCC
GGGAGTGCACGGCAGCGACGGCAGtacaaggaaggaaaagagaagcaGAT
GATGAAGTTCTTTGTCGGGCAGGCGATGAAGGAGACAGGGGGACGGGCGC
ACCCGGGGAGAATGGAAACGTTGCTGAGGGTGGAGCTgcgcaaggcggag
gaggaggagatgggagggaaatgaATGCCAGggaCCCTGCCTGTCCTCAA
CAAGGAGGCTGTGCACCAATCCCTCCGgaccgccctcgccctcggctGCC
AAGTCCATCCGGTCTCCCGTTTCGAGCGCAAGCACTATTTCTATTGCGAC
CTGCCACAGGGGTACCAGATCACGCAGCAGGCATCGCCCATTGCCACCGG
cggCTCCCTTCTGGTAGAGCCCCCCCTCCACGAAAACCAACGGCAGCGAG
CGCCCAGGAAGAGAAACGCGTCCTCCCCACACCCCGGACTCGAGGGAGAC
GACCCGGAGGAAGCCGCCTGGCCCCCCTTCCGCGTGCGCATAGCCCGCCT
CCAGATCGAACAGGACTCGGGGAAGTCTACGCACGActcggcgggaggga
ggcacacCCTTGTGGACCTGAAcagggcgggcgtggccctGATGGAGATC
GTCTTCGAGCCTGAGCTCTCCAGCCCATCCCAAGCAGCTGCTTGCCTTCG
GAGTTTACAGGCCACGCTCCGCGCCCTGGACTCCTGCGACGgcctgatgg
aggagggctcCCTCCGCTGCGATTTGAACGTGTCGGTGcggcccgcccct
ccctcccccgcctttcccccggggCCCTGGGGGCCTCGGGTGGAAGTCAA
AAATTTAAATTCCTTGAAAGCGCTGCAAACGGCCGCGGCGTTTGAAATTC
AACGGCAGATCGCCCTCCACGACCCCGGCGACGCCTCGCGGGCGGGCATG
GCCGGGACCGAGGGTGGACAGGACCTCAGCCGTTTCAACGGCCATTTCGA
ATTCAAATCGGTGGAACGGGAGACTCGGGCGTTCAACGCGGCGACGGGCG
AAACGACGCGGATgcgtggaaaggaaggagcagtGGACTACCGTTTTTTT
CCGgagcccgacctcccccccctggtGCTGGACATGGACTGGGTGGAGGC
AGTGAGACGAGGCCTGCCGGAGTTGCCGCAGGCGACCCGATCGAGGCTCG
TGGAGGAGCATGGCCTGACGCCGGCGCAGGCAGAGGTCCTgatcggggag
ggggaggcggccgtgggTTTTTTTGAGGACGTGgtgcggggcgggggagg
gagggaggggagaggggtagCCAATTGGGTGTGCAACGACTTGATAGGGT
TGGTAAAGGCGAAAGCGTCAgctggcaagggagggaagggttgTGCAgtc
gtcgcctccccctacacctcctctcctgccttgaCGGGACAGGCAGGGGC
GTCTCCCACAGCCAGCTATGCCGTCCATCCCGAGGCGATGGGCGAGTTGA
TCGACATGGTGTCTGGTGGAGAGATCTCCATCCGGACGGGAAAAGAAGTG
CTGGCCCTGATGGTggcaggagggagtgaagacgaggagggaggagggag
ggggggggagaagcgaCAGAGGCCGCGGGAGATTGTGGCGGCGCGAGGGT
GGGGACAGGTGAGCGACGAGACTGTGCTGATCGGGGTGGCGAGGAACGTG
GTGAGGGACCCCGGGAGTGCACGGCAGCGACGGCAGtacaaggaaggaaa
agagaagcaGATGATGAAGTTCTTTGTCGGGCAGGCGATGAAGGAGACAG
GGGGACGGGCGCACCCGGGGAGAATGGAAACGTTGCTGAGGGTGGAGCTg
cgcaaggcggaggaggaggagatgggagggaaatga back to top
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