EWM22521.1, cds8152 (CDS) Nannochloropsis gaditana

Overview
NameEWM22521.1
Unique Namecds8152
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:22349..22355 +
Alignment locationKK037248.1:22666..22834 +
Alignment locationKK037248.1:22946..24431 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22521.1
Productglutamyl-trna b subunit
Orig transcript idgnl|cribi|Naga_100769g1.4211.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:22349..22355 +
KK037248.1supercontigKK037248.1:22666..22834 +
KK037248.1supercontigKK037248.1:22946..24431 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0016874ligase activity
GO:0016884carbon-nitrogen ligase activity, with glutamine as amido-N-donor
Vocabulary: INTERPRO
TermDefinition
IPR003789Asn/Gln_tRNA_amidoTrfrase-rel
IPR004413Apn/Gln-ADT_bsu
IPR017959Asn/Gln-tRNA_amidoTrfase_suB/E
IPR006075Asn/Gln-tRNA_Trfase_suB/E_cat
IPR018027Asn/Gln_amidotransferase
Homology
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|585103036|gb|EWM22521.1| (glutamyl-trna b subunit [Nannochloropsis gaditana])

HSP 1 Score: 1122.84 bits (2903), Expect = 0.000e+0
Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDPEEAAWPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAPPSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLRVELRKAEEEEMGGK 553
            MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDPEEAAWPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAPPSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLRVELRKAEEEEMGGK
Sbjct:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDPEEAAWPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAPPSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLRVELRKAEEEEMGGK 553          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|566012861|gb|ETI35772.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica P1569] >gi|566012862|gb|ETI35773.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica P1569] >gi|567978956|gb|ETL29441.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica] >gi|567978957|gb|ETL29442.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica] >gi|570940310|gb|ETP05567.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica CJ01A1] >gi|570940311|gb|ETP05568.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica CJ01A1] >gi|570970580|gb|ETP33699.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica P10297] >gi|570970581|gb|ETP33700.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 395.586 bits (1015), Expect = 4.054e-128
Identity = 236/585 (40.34%), Postives = 313/585 (53.50%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDP--EEAAWPPFR------------------------VRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAP------------PSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLRVELRKAEE 547
            +PGTLPV+N+E VHQ++RT LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GGSL  E P           +    S H G + D+   + + +   R                        VRIAR+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP                 +    P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGGQ             V RETR+F+A TGET RMR KEGA DYRFFPEPDLPPLV     +  +   +PELP A ++RL  ++ LT  ++ VL+ E  AA  +FE +      R  + V NWV NDL G +K                       A+ G   +SP A+       +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + R V+ DP S +    Y +GK  Q+  FF+GQ MK+ GGR HP    ++++  L++ ++
Sbjct:   68 LPGTLPVINRECVHQAIRTGLAVNATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGSLHFELP-----------ESAVVSEHGGAQSDESTFDASKYKSRREKNEALKKWKAKQAKQQQDVISRSVRIARIQIEQDSGKSNHDLEDDS-TVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADVDTLHHALTSSTTAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------QEGGQ-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSQKLIHEISEKMPELPDALKNRLCAQYDLTSYESSVLVNEPGAA-NYFETIA-AENSRPSKVVVNWVLNDLFGHLK-----------------------AVNGDIASSPVAA-----TELGALIDLIQDGTISGKIAKDVLELMF-----------YENEAKKTPLQIVEEKGWKQIQDPQEIRALCRAVLDDPKSKKNLDAYWKGK-TQLFGFFIGQVMKQCGGRVHPELANSIMQEILKEHKQ 574          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|675175237|ref|XP_008896503.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica INRA-310] >gi|675175241|ref|XP_008896505.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica INRA-310] >gi|568104242|gb|ETN18899.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica INRA-310] >gi|568104243|gb|ETN18900.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica INRA-310] >gi|970644570|gb|KUF85364.1| Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Phytophthora nicotianae] >gi|970665653|gb|KUG02248.1| Glutamyl-tRNA(Gln) amidotransferase subunit B [Phytophthora nicotianae])

HSP 1 Score: 395.201 bits (1014), Expect = 5.979e-128
Identity = 235/577 (40.73%), Postives = 308/577 (53.38%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDP--EEAAWPPFR------------------------VRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAP------------PSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLPV+N+E VHQ++RT LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GGSL  E P           +    S H G + D+   + + +   R                        VRIAR+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP                 +    P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGGQ             V RETR+F+A TGET RMR KEGA DYRFFPEPDLPPLV     +  +   +PELP A ++RL  ++ LT  ++ VL+ E  AA  +FE +      R  + V NWV NDL G +K                       A+ G   +SP A+       +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + R V+ DP S +    Y +GK  Q+  FF+GQ MK+ GGR HP    ++++
Sbjct:   68 LPGTLPVINRECVHQAIRTGLAVNATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGSLHFELP-----------ESAVVSEHGGAQSDESTFDASKYKSRREKNEALKKWKAKQAKQQQDVISRSVRIARIQIEQDSGKSNHDLEDDS-TVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADVDTLHHALTSSTTAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------QEGGQ-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSQKLIHEISEKMPELPDALKNRLCAQYDLTSYESSVLVNEPGAA-NYFETIA-AENSRPSKVVVNWVLNDLFGHLK-----------------------AVNGDIASSPVAA-----TELGALIDLIQDGTISGKIAKDVLELMF-----------YENEAKKTPLQIVEEKGWKQIQDPQEIRALCRAVLDDPKSKKNLDAYWKGK-TQLFGFFIGQVMKQCGGRVHPELANSIMQ 566          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|570316515|gb|ETO64463.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica P1976] >gi|570316516|gb|ETO64464.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 395.201 bits (1014), Expect = 7.198e-128
Identity = 235/577 (40.73%), Postives = 308/577 (53.38%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDP--EEAAWPPFR------------------------VRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAP------------PSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLPV+N+E VHQ++RT LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GGSL  E P           +    S H G + D+   + + +   R                        VRIAR+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP                 +    P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGGQ             V RETR+F+A TGET RMR KEGA DYRFFPEPDLPPLV     +  +   +PELP A ++RL  ++ LT  ++ VL+ E  AA  +FE +      R  + V NWV NDL G +K                       A+ G   +SP A+       +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + R V+ DP S +    Y +GK  Q+  FF+GQ MK+ GGR HP    ++++
Sbjct:   68 LPGTLPVINRECVHQAIRTGLAVNATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGSLHFELP-----------ESAVVSEHGGAQSDESTFDASKYKSRREKNEALKKWKAKQAKQQQDVISRSVRIARIQIEQDSGKSNHDLEDDS-TVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADVDTLHHALTSSTTAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------QEGGQ-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSQKLIHEISEKMPELPDALKNRLCAQYDLTSYESSVLVNEPGAA-NYFETIA-AENSRPSKVVVNWVLNDLFGHLK-----------------------AVNGDIASSPVAA-----TELGALIDLIQDGTISGKIAKDVLELMF-----------YENEAKKTPLQIVEEKGWKQIQDPQEIRALCRAVLDDPKSKKNLDAYWKGK-TQLFGFFIGQVMKQCGGRVHPELANSIMQ 566          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|567950276|gb|ETK75993.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica] >gi|567950277|gb|ETK75994.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica] >gi|568038347|gb|ETM35880.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica] >gi|568038348|gb|ETM35881.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica])

HSP 1 Score: 394.815 bits (1013), Expect = 1.048e-127
Identity = 235/585 (40.17%), Postives = 313/585 (53.50%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDP--EEAAWPPFR------------------------VRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAP------------PSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLRVELRKAEE 547
            +PGTLPV+N+E VHQ++RT LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GGSL  E P           +    S H G + D+   + + +   R                        VRIAR+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP                 +    P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGGQ             V RETR+F+A TGET RMR KEGA DYRFFPEPDLPPLV     +  +   +PELP A ++RL  ++ LT  ++ VL+ E  AA  +FE +      R  + V NWV NDL G +K                       A+ G   +SP A+       +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + R V+ DP + +    Y +GK  Q+  FF+GQ MK+ GGR HP    ++++  L++ ++
Sbjct:   68 LPGTLPVINRECVHQAIRTGLAVNATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGSLHFELP-----------ESAVVSEHGGAQSDESTFDASKYKSRREKNEALKKWKAKQAKQQQDVISRSVRIARIQIEQDSGKSNHDLEDDS-TVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADVDTLHHALTSSTTAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------QEGGQ-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSQKLIHEISEKMPELPDALKNRLCAQYDLTSYESSVLVNEPGAA-NYFETIA-AENSRPSKVVVNWVLNDLFGHLK-----------------------AVNGDIASSPVAA-----TELGALIDLIQDGTISGKIAKDVLELMF-----------YENEAKKTPLQIVEEKGWKQIQDPQEIRALCRAVLDDPKAKKNLDAYWKGK-TQLFGFFIGQVMKQCGGRVHPELANSIMQEILKEHKQ 574          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|568008424|gb|ETL82643.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Phytophthora parasitica] >gi|568008425|gb|ETL82644.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, variant 1 [Phytophthora parasitica])

HSP 1 Score: 393.66 bits (1010), Expect = 2.259e-127
Identity = 234/577 (40.55%), Postives = 308/577 (53.38%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDP--EEAAWPPFR------------------------VRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAP------------PSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLPV+N+E VHQ++RT LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GGSL  E P           +    S H G + D+   + + +   R                        VRIAR+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP                 +    P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGGQ             V RETR+F+A TGET RMR KEGA DYRFFPEPDLPPLV     +  +   +PELP A ++RL  ++ LT  ++ VL+ E  AA  +FE +      R  + V NWV NDL G +K                       A+ G   +SP A+       +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + R V+ DP + +    Y +GK  Q+  FF+GQ MK+ GGR HP    ++++
Sbjct:   68 LPGTLPVINRECVHQAIRTGLAVNATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGSLHFELP-----------ESAVVSEHGGAQSDESTFDASKYKSRREKNEALKKWKAKQAKQQQDVISRSVRIARIQIEQDSGKSNHDLEDDS-TVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADVDTLHHALTSSTTAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------QEGGQ-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSQKLIHEISEKMPELPDALKNRLCAQYDLTSYESSVLVNEPGAA-NYFETIA-AENSRPSKVVVNWVLNDLFGHLK-----------------------AVNGDIASSPVAA-----TELGALIDLIQDGTISGKIAKDVLELMF-----------YENEAKKTPLQIVEEKGWKQIQDPQEIRALCRAVLDDPKAKKNLDAYWKGK-TQLFGFFIGQVMKQCGGRVHPELANSIMQ 566          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|301111898|ref|XP_002905028.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Phytophthora infestans T30-4] >gi|353558779|sp|D0N761.1|GATB_PHYIT RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Short=Glu-AdT subunit B >gi|262095358|gb|EEY53410.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Phytophthora infestans T30-4])

HSP 1 Score: 382.874 bits (982), Expect = 4.689e-123
Identity = 229/566 (40.46%), Postives = 303/566 (53.53%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPP----------LHENQ-----RQRAPRKRNASSPHPGLEGDDPEEAAWPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAP------------PSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLPV+N+E VHQ++R  LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GG+L  E P           H ++      +   RK    +          ++       VRI R+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP                 A    P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGG+             V RETR+F+A TGET RMR KEGA DYRFFPEPDLPPLV     ++ +   +PELP+A + RL  ++ LT  ++ VL+ E  AA  F  + V     R  + V NWV NDL G +K                       A+ G   +SP     V    +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + R V+ DP + +    Y +GK  Q+  FF+GQ MK+ GGR HP    ++++
Sbjct:   68 LPGTLPVINRECVHQAIRMGLAVDATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGALHFELPESAVVSEHGGAHSDEATFDASKYKSRKEKNEALKKWKAKQAKKQQDVISRSVRITRIQIEQDSGKSNHDLEDDS-TVVDLNRAGTALLEIVMEPDLRSPVEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGAEADVESLHNALTARTAAPFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------EEGGE-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVFSEKLIQEISERMPELPEALKERLCAQYDLTSYESLVLVNEPGAAPYF--ETVAAQNSRPSKVVVNWVLNDLFGHLK-----------------------AVNGDIASSP-----VTATELGALIDLIQDGTISGKIAKDVLELMFY-----------ENEPKKTPLQIVEEKGWKQIQDPEEIRALCRAVLDDPKAKKNLDAYWKGK-TQLFGFFIGQVMKQCGGRVHPELANSIMQ 566          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|695395445|ref|XP_009521164.1| (hypothetical protein PHYSODRAFT_482876 [Phytophthora sojae] >gi|348686061|gb|EGZ25876.1| hypothetical protein PHYSODRAFT_482876 [Phytophthora sojae])

HSP 1 Score: 378.252 bits (970), Expect = 5.815e-122
Identity = 233/553 (42.13%), Postives = 295/553 (53.35%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDDPEEAAWPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRP--------------APPSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLPV+N+E VHQ++RT LA+   VHP S FERKHYFYCDLP GYQ+TQQ +P+A+GG+L  E                            P  A   P  VRI R+QIEQDSGKS HD      T+VDLNRAG AL+EIV EP+L SP +A   +R LQ  LR LD CDG MEEGS+RCDLNVSVRP              A  S   P  P+G RVEVKN+NS++ +  AA +E +RQIAL +            EGG+             V RETR+F+A TGET RMR KEGA DYRFFPEPDLP LV+    ++ +   LPELP A + RL  ++ LTP ++ VL+ E  AA  +FE V      R  + V NWV NDL G +KA                         G    SP     V    +G LID++  G IS +  K+VL LM               E ++ P +IV  +GW Q+ D   +  + + V+ DP   +    Y  GK  Q+  FF+GQ MK  GGR HP    T+++
Sbjct:   68 LPGTLPVINRECVHQAIRTGLAVDATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGALHFEL---------------------------PASADVIPRSVRITRIQIEQDSGKSNHD-LEEHSTVVDLNRAGTALLEIVMEPDLRSPLEAGQVMRQLQHLLRHLDVCDGNMEEGSMRCDLNVSVRPTNLGEEADVEALHTALTSSTAP--PFGERVEVKNMNSIRNMMRAAEYEARRQIALIE-----------EEGGE-------------VHRETRSFDAVTGETKRMRSKEGAKDYRFFPEPDLPRLVVPEQLIQEISESLPELPDALKDRLCAQYDLTPYESSVLVNEPGAA-QYFETVAL-EKSRPSKMVVNWVLNDLFGHLKAT-----------------------NGDIAGSP-----VQATELGGLIDLIQDGTISGKIAKDVLELMF-----------YENEAKKTPLQIVEEKGWKQIQDPEEIRALCQAVLDDP---KNLDAYWNGK-TQLFGFFIGQVMKRCGGRVHPELANTIMQ 521          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|1173929603|gb|OQR82810.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Achlya hypogyna])

HSP 1 Score: 377.096 bits (967), Expect = 2.123e-121
Identity = 233/552 (42.21%), Postives = 299/552 (54.17%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAPRKRNASSPHPGLEGDD-----------PEEAA--WPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAPPSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLPV+N   V Q+LRTA AL   V   S FERKHYFYCDLP GYQITQQ +PIAT G L  +    + + Q     R   +     + D            P  AA  W   +VR+ R+QIEQDSGK+ H S    H  VDLNRAG  LMEIVFEP+L S ++A   LR +Q  LR + +CDG ME+GS+RCDLNVSVRP P SP     P+G RVEVKN+NS+K L  A  +E++RQ+ L             T GG              +E+ETR F+AATG T RMR KEGA DYRFFPEPDLPPLV+   +V+     LPELP   ++RL   +GL+  +A VL+     AV +FE V      R  + V NWV NDL  L+KA  +        ++  SP                    V PE +G+LID+V    IS +  K+V+ LM     ED  G          P +IV  +GW Q++DE  L      V+ +P + R    Y+ GK  Q+  FF+GQ MK +GGR HP +   ++R
Sbjct:   51 LPGTLPVVNTACVQQALRTARALQSDVQLRSVFERKHYFYCDLPLGYQITQQRAPIATNGVLKFQVQEAKPRAQTTFSSRKEKNAALKAQKDQGMSDTSVHRFMPRVAADEWVEKQVRVNRIQIEQDSGKNIH-SLDATH--VDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKPTSPD-EDVPFGERVEVKNMNSIKNLMKAVEYEMERQVEL-----------ITTTGG-------------CIEKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVISQSFVDEALASLPELPDKMKARLCAMYGLSAYEASVLVL-TPGAVEYFEAVC-ADVSRPHKLVTNWVLNDLFALLKATNT--------SIAESP--------------------VSPERLGQLIDLVVNESISGKMAKDVIELMY---YEDARG----------PADIVQEKGWSQITDEAELRRFCEAVLAEPKAQRNVAAYRGGK-TQLFGFFIGQVMKASGGRVHPEKTNEIMR 530          
BLAST of EWM22521.1 vs. NCBI_GenBank
Match: gi|1173943057|gb|OQR91963.1| (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Thraustotheca clavata])

HSP 1 Score: 367.081 bits (941), Expect = 9.490e-118
Identity = 221/544 (40.62%), Postives = 302/544 (55.51%), Query Frame = 0
Query:    1 MPGTLPVLNKEAVHQSLRTALALGCQVHPVSRFERKHYFYCDLPQGYQITQQASPIATGGSLLVEPPLHENQRQRAP-----RKRNASSPHPGLEGDDPEEAAWPPFRVRIARLQIEQDSGKSTHDSAGGRHTLVDLNRAGVALMEIVFEPELSSPSQAAACLRSLQATLRALDSCDGLMEEGSLRCDLNVSVRPAPPSPAFPPGPWGPRVEVKNLNSLKALQTAAAFEIQRQIALHDPGDASRAGMAGTEGGQDLSRFNGHFEFKSVERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRGGGGREGRGVANWVCNDLIGLVKAKASAGKGGKGCAVVASPYTSSPALTGQAGASPTASYAVHPEAMGELIDMVSGGEISIRTGKEVLALMVAGGSEDEEGGGRGGEKRQRPREIVAARGWGQVSDETVLIGVARNVVRDPGSARQRRQYKEGKEKQMMKFFVGQAMKETGGRAHPGRMETLLR 539
            +PGTLP +N+  V Q++RTA AL   +   S FERKHYFYCDLP GYQITQQ +PIAT G L  +  + E Q++ +      +++NA+S     +  D     W   +VRI R+QIEQDSGKS H       T VDLNRAG  LMEIVFEP+L S ++A   LR +Q  LR + +CDG ME+GS+RCDLNVSVR  P S      P+G RVEVKN+NS+K L  A  +E+QRQI            +  T G +             +E+ETR F+AATG T RMR KEGA DYRFFPEPDLPPLV+  ++V++    LPELP+  ++RL   +GL+  +A VL+    +AV +FE V      R  + VANWV NDL  L+KA               +P   SP               V P  +GEL++++    IS +  KE++ LM               E  + P  IV  +GW Q++D   L  + ++V+ DP + +    Y+ GK  Q+  FF+G  MK + G  HP ++  +++
Sbjct:   51 LPGTLPTVNEACVQQAIRTAGALQSTIQKHSVFERKHYFYCDLPLGYQITQQRAPIATNGVLNFQ--VQETQQRVSTNFTSRKEKNAASKVKKNQQID----EWVEKQVRINRIQIEQDSGKSVHTLDA---THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRTKPTSEN-EQIPFGERVEVKNMNSIKNLMRAVEYEMQRQI-----------DVIETTGNR-------------IEKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVISSEFVDSALATLPELPEKMKARLSATYGLSAYEASVLVL-TPSAVDYFESVC-TDASRPHKLVANWVLNDLFSLLKA-------------TNTPIDESP---------------VSPARLGELLNLIVSEIISGKIAKELIELMYY-------------EDSRSPLMIVQEKGWMQITDPAELSKICQSVLDDPKNQKNIAAYRGGK-AQLFGFFIGHVMKASNGLVHPEKVNGIMK 516          
The following BLAST results are available for this feature:
BLAST of EWM22521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103036|gb|EWM22521.1|0.000e+0100.00glutamyl-trna b subunit [Nannochloropsis gaditana][more]
gi|566012861|gb|ETI35772.1|4.054e-12840.34aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
gi|675175237|ref|XP_008896503.1|5.979e-12840.73aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
gi|570316515|gb|ETO64463.1|7.198e-12840.73aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
gi|567950276|gb|ETK75993.1|1.048e-12740.17aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
gi|568008424|gb|ETL82643.1|2.259e-12740.55aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
gi|301111898|ref|XP_002905028.1|4.689e-12340.46aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
gi|695395445|ref|XP_009521164.1|5.815e-12242.13hypothetical protein PHYSODRAFT_482876 [Phytophtho... [more]
gi|1173929603|gb|OQR82810.1|2.123e-12142.21aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
gi|1173943057|gb|OQR91963.1|9.490e-11840.63aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8176rna8176Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications