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Properties
| Property Name | Value |
|---|
| Product | protein phosphatase 2a catalytic subunit |
| Orig transcript id | gnl|cribi|Naga_100290g7.9872.mrna |
| Orig protein id | gnl|cribi|Naga_100290g7.9872 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:740790..742453 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8168 ID=rna8168|Name=rna8168|organism=Nannochloropsis gaditana|type=mRNA|length=4608bp
ACAGGCAACGTGGGGATTCTTTTTGATAGGTGACGCCGTCGTTTACATTT
GTGGAGGAAGGTTGCGTCCAGGGCGCTAATTTGGACACGTAGATCAGGAC
ATTCTTGGCTCCCTACGGTAACAGCGTGGCCCTCTGAGCTTTAAATACAA
GACAAGATGAATTTGTGGTGTGAAACACTGGTTGCGGAGGCCGAAGGATT
GCTGCAAGAGGCGGATAGTTATCTTTTCCTTCCACATGCCTGCGACGGGT
ATGAGCGGGTGGCCCTGCTTGCCGTCGATCACACAAAAGGCCTCCACGTC
CGAGCCGAGTCACACCAACTCGAGAGACCAAATACGGTTGATACATACCA
TCAAGAGGAGGAGGCAACGCGGTGGGTCGGGTGGGAGGAGATGCGCCGCC
TCGCGGATGATCGTTTCGGCGGACACCTTCCTCGTGCCTTGCCCCAGTCC
CACGTCCACCAAATGCTGACCTGTGCGGACAACCTGGGAAGCCTGAAATA
TTTCCATGAGGCTCATTTGCTCGAAGGCATCCGCGTCAGTGTCATGCAAG
GCCGATCATGTCAACGTTGCGGGCCGACCGTCGTTGGTTTCGAGAAAGGG
AAGGGGAAAGACTCGCCCCAAGGCCGCGTCCCCTCTTTCCATACCTCACC
ATCCATGTGGACTTCTCCTTCCTCTGCCTCTCTCTCCACCTGGCAACATA
GTCTGGACGAGCGATGGAGCCCAAACGGAGGAACGAGTCCACATCCCTGC
GACGCTTTGCACGCTGCCTTCTACGCCCTCCATTCACGTGCTGGGAACGC
CCATCAATGTCTGGTGCTCCTCGGCGGATTTTCGGGAGCCAATGACACCA
GGTCCCAGATGTTACGTGTACTTTTTCAGCATTATCAAGCTGACGCTCCT
GTCCTAGTCCGGCGGATCTCGGCCGCAATATCCCTCCTATCCTCTCTCCT
GGTACTGGAGGACGCGGCCTTGCTCTCCTCTCCCTTAAAAATTAGCTTTA
GCATCGATCTTCAAACACCCCCCGAAGGCCAGGACCACGACAGCACGCGC
CTGACTGGTACCTTGACAGGCGCCGCCTTGGACATTTTCATGATCGAACG
CGACCCCGCCAAGTACGACGCGTTGAGGGACGCACTCGCCAGCGCCTCGG
GGACGGAGACCCTGGGGATGGACGGGGTGGAAGCTGGTGGTCCCTACCCC
ATAAGTCTCGGCACCCTTTATTCTTCCACCTCCCACACATACACCAATGC
CCTAGGCGGGGGAAACCCTCCGTCGCCAATGCCCGTAAACGGCGCCTCCC
TCTCGGCTACGGCTTTGAAAGACCTGGACCTCAGCGATTTGTCCTCCTCC
CTTTCCCTGCCCTTGCAAAACCCGCAATTGTGGACCGAAACCAAGGATGA
GAAGAAAGGGGACAAGACCTTCGAGGCCCTGTGGAGCTCTTTCCAGGCAG
TCGGGGTCGGGAAATCCGACGCCGTCAGCGTCCTCCGTGCAATGGCAGCC
TCCATCGTCCTCTCGAAAGCATCCGCGCCCCTGCCCTTGTCCCTCTACTG
GACTTTTGAACTTTTGAATTTCCCCCGCAAACTGACCAAAGTCGAGATCC
AACGGGTCGGGGCGTCGGAACGGGATTTGAAGCAACTCGCGCGCGAGGCC
TTCACGCTCGCCATTCAAGAGCTGGTTGGCCTCTTAAATACCGCCCTATC
CAGTAACAATCCCTCCCCGTCCTCCCTCGCTGCCCCTCAGTCTCCCTCAC
CCTCCACGGAACCACGAATCCTGTCCATTCTGAACCTCCCTGCCCCCACG
CTCAACCACAACCTGGGTCGCTTCAGCGATCTTGCCGCCGCCCTGGCCGT
CATCCAAACCATGACCCAGATCGGCCCTCACCTCGCAGAGGACTATCGAG
CGAACCCTTCGCAGGCCACCACCGGTACCACCCCCGAAGGTGGTAAAGAG
AAGCAGGAAATGTGCGAAAAAAAGACGTCGGGAAAGGCAGAGGCGGCGGC
GATTTCTTCCACGGAAGAAGCGGAGAGCCACGCGAAGTCCAGCTCTGGCA
GGAGCCCCGAGAATTCCGGCAGCATGGACAGCAACAGCGGCACGGAGAAA
AGGAAAGAGTGTAGAGGTGTCAAAAATTTTCCTGGTCCTGCCCAAGGGCC
CGGGGAAATCGTGAACAGCGCCGTGGAGTCGGTGTATGGGCTGGTGGCGG
CCGTGAACCGGGCGACCTTGGCGCGGGTGGCAGAGAACAAGGTGGAACGG
GAGCTGAAAGCCTCCCTCCGGCTGGGCAAGACGGACGACGTGACCTTACC
CTGGGGGAAAACCCTGTTGGCCAAGCCGTTGATCCGTTTGAATGCGGCGA
TGCTTCCCCCGGACCTGGCGCAGTTGGTGGGCTGCCAAAGGCGATGGTCA
GGGAAGGAAGCCGCGACGGTATTGGACGGGTTGATCGCATGGGTGGACCG
GGCCGTGGGCAAGAGCGGTGACCGCACCGATACGTCTGGGACACACGCCT
CCCAAGAGAAAGGCACGGAGAGAATGGAGGACCATGGGCAGGCGACCGGC
GCGGGGGAGGTGGGAGACAGTGGGGAAGGGGCTGGGACCCGTGCTTGCGG
AGGGGAAAGGGAAGGAGCAAGGGAGGAGGCGACAGGGGAGGGAGAGGTAG
GAGACCAGGCGATGGAGGAGATAGGGGAAGTTGCTTCCAAGGCACGAGCA
CCTCCCACACCTGCCCGCACGCCTGCCTTCCACCTGATTTGTGACCTCAA
GACGCACTCATCTCCCACCACCTTCGACGGAATAAAAGTCTTGCAGCAAA
TTCGCCTCTACCAGCTCGACACCCTGGCGCAGGGTTTTCCCTTTGTCGGC
CCCTCCCCCAACCCCGTCTTCTCCACGTCCTTCATCTCCCAGCGCATCCT
TTCCGGTGGGGATGGAGGGCCGGGGGCCCATGGAGGGAACCCGCTTTTGA
GGGGAAAAAACCAACAGCTCTTTCCCGGACTCAACTCGGTCACGCGCTCC
CGCCTCAGCGCCTACATGTCTCCCGCCCAGAGCACTGGGAAAGTCTCGAC
GGGTGCGCCGGTGCCGGCCCGTGTGAGTCGAACAGGCGGGCCGAACATGA
GCTGCGCCCGTACCCACGCTGGCCCTCTTCCGGGTATCCTCCCGGCGAAC
CAACCCGACACCCGCAATCGTTTGGGCTCAGTCGCTGCCCCTGCCTTCCC
ACCTATGGACGGGCGGGCCCGGATCTCGGCCAAGGACTCGACCTTCGCGA
CGAACCATGGTCACATGCAGTACCAGCAGCCATCCAACCCTGCTCAGCCA
ACCCCCGGGTATCTTCAGGAGGAATGCTGGGCTTTGCGGCGTCGTAACCA
GGAACTGACCGCCCTGAGCATGGAATTGGCCGAGATGGTCACGGGGCCGT
CGGGGAGGCATCAAAGCACGAACACCTCCGAGCAGGGACTGTTTCCCGGC
GTCGGGGAGGGGAGCGGGAAGGGGAGGGAAGGAGACGCTAGATCTCTTTC
TGAGGTGCAGGCAAAGGTGATGGAAGTCAGAGCGTCTGTGTACGAGACGT
TGGACAAATTTACCAAAGTCATTTGGGACACCTTTGGCTTCGATGTCCGA
AAAGAAGGAGTGGTCAGGTTGCGGCACCTCCGCCACGAGATCGTCGGGCA
TTTGGATGCGCTGATCGCCCAGGAGGAAAGCTTGAGAGGTCTTTGGGAAC
ACGCCGAAGGTATCTACCGCATGGAAGAAGAGGCCGGGAGCTGTTTCTCC
GCCCTGCATGCTGAGCAACCACCCATCCTCGTCCCCGGGCCCGTCTCCCG
CGGCATCGGAAAGCCTCAGCATGGTCACTTTCCCCACCGCCACCCTATAT
ACGCCCCACAAAATCTTTCCTCGTTCCCACCCCCTTTGTCACAGCACAAC
ACACACCGGTACCCTTCTTTACCCCATCCCCAAGGTCTTCGCTCCCTCGC
CCCGGCTTATGCTGACCTTCACGCACACCAGGGGCCCTAAAATCACGTTT
GACTCCTTGCTGTGGACTGCTGCCGATGCTGAAATTAATACTATACCCGA
GCTGTTTAAGATGTCCTCCCGTTTGCAAAACTGTGCGGACGCGCGTGTGA
GCGTTTTTGTATGTGTTGTATACTGGCCTTTCTCTATTTTCCTAATTTTA
TTTGCCAAAAGTAGTCCTGATACCTGCCTGCAAATGTTCTTGAGAGCGAA
ATTTACTCTTTTCCAATGTACTTAAATTTGACTGCAGAGTGTCACCGTAT
ATGTCCTCCCTGAGTGGGGGGAAGCGCTTTGTAGCGTCAGGAGCTTGGCA
GGAGAGACTAGGGTCCTAGCCCTTTTTGCCATGCAAGTGGAGGAACCAAG
AAAGCGAGTTGAGATCACTCGCGTGCACGCAATTTATTGATGTGTCCTTT
TTTTTCAGAGGGATAGTGCCTGCAGGAAGGGCGGCAGAGACAAGGGACTT
GTCCAAGCGTCCAATGTATGAGAGGAAATGTGTGTGCGAAAGAGCGTCAC
GTTCCATTCAAATGCGAGTATCAACACTATGTACACACGGTATCGCTCAT
AAATTTCAGAGGAATCAAAATTTTCTTTCCCTCATTGGAGCTTGCAGCCC
CTTCTACC back to topprotein sequence of rna8168 >rna8168-protein ID=rna8168-protein|Name=rna8168|organism=Nannochloropsis gaditana|type=polypeptide|length=138bp
MAPPSVYDPGLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAV
QCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVAS
LLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK back to topmRNA from alignment at KK037247.1:740790..742453+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8168 ID=rna8168|Name=rna8168|organism=Nannochloropsis gaditana|type=mRNA|length=1664bp|location=Sequence derived from alignment at KK037247.1:740790..742453+ (Nannochloropsis gaditana)
TCCGAGAACAACACGGTCTCATTGATAATCAATCCAACAGGCTGTTATGT
ATCATTGACGTCAACTTTGTTTTCCTCAGAAGTGGGTAGGTTTGTTGGGA
CGGTAATTTTATCGCCACGACTCGACACACTTTTGCACGGGATCATCCCC
CTTtcagcctccttcctgcgCTTGGTCCatggcccctccttctgttTACG
ACCCTGGTCTTCTAGAAGCACACATTGAATCCTTGCGCAAAGGACAAATT
CTACCTGAGAACGTAGTGTGGAGTTTGTGCGAAAAGGTGAGGATTTACGA
AGGTAGCGAAGAGAGGGCTAAGTAGGGGAACAAGACCGTGTAAGGAGAAA
GACATGATTAAGACGCTGAGGTACCACGCCAATGAGAATAAGATGTAAGT
CCACTTCCAAATAAGATATGGCACAAATAACATAATTCGAGGAAGCATGT
TTGCGAGAGATAGTTACGACTAGGAGAATCTTCACGGATTTAACAGCGCT
GGTGTGGCGAATGATGATCCAAATTGCCATGTCGCCACTGCTCTGGGCAT
CTCCGTGCCTTTTTCAAACATTTCTGGGGGGGTTTTCCAGGCAAAGGAGA
TTCttcaagaggagagcaaTGTGCAAGCAGTGCAGTGTCCCGTCACGATA
TGTGGAGACATCCACGGACAggtgaggaggcgggagggagggtgggggtt
AGACAGAGCGTCGACGCTGAAGCTACTCAGTAGCTGCTCAGTGTGTGGTG
ACGAGCACGTGTGACATCCTGATACTAGAACATGAGTGCTCACGTGCCAA
AACATGCTGCGAACGGCTCAGAGCGGGCGTCAAGACCACAGGCtgtctcc
cccgcctctcccttaCTCATTACCgtttttcctctctcttcgttctccct
ccaccacccagtTTTACGACCTTCTGGAGCTTTTCCTCATCGGTGGAGAC
TGTCCAGACACCAACTACTTATTCATGGGCGATTACGTTGACCGAGGCTT
TTATTCGGTAGGATGTTGAAGGGGGAGTaggaagatgggagggcgaaagg
ggtTGAGCGTACCTGTCAGGGTCGAACGGCGGTCAATACACACGTCTTCT
CTTTTTTATTCCTTGATTTCAACGACCATGGGGTTCTGATTGGGTGTCCG
TGAAGACGACATAGTGCATGCTCCTCCGATCATCAGCGCCAtctgtcccc
ccttccctcccttcttcccttcctcccttcttccctccctccctttttac
tCGCGGCAGGTGGAAGTGGCTTCGCTCCTGATTGCGCTCAAGGTCCGTCA
TCGACATAGGATCACGATCCTGCGGGGGAATCACGAGTCTCGGCAAATCA
CGCaggtgagaagggaagaaggggaaggagggagggagggaggggtggag
ggcgggaggtagggaaggagataCGGAAGATAAAAAGGCGAGTGGATCAA
TCGCCAAGACAAGGTCACCATTGACGTGGTAGAGAacaagaggagaaaaa
gacggaTGCATCTAGGTGTAATAGATAATGCCCTCTCTCTACAAGCGTGA
CCgaccatcctccctcccttcctccctccctccctccctccctatccctc
cctccctccctccctatccctccccctgcaggTGTATGGCTTTTACGACG
AATGTCAGCGGAAA back to topCoding sequence (CDS) from alignment at KK037247.1:740790..742453+ >rna8168 ID=rna8168|Name=rna8168|organism=Nannochloropsis gaditana|type=CDS|length=2070bp|location=Sequence derived from alignment at KK037247.1:740790..742453+ (Nannochloropsis gaditana)
atggcccctccttctgttTACGACCCTGGTCTTCTAGAAGCACACATTGA
ATCCTTGCGCAAAGGACAAATTCTACCTGAGAACGTAGTGTGGAGTTTGT
GCGAAAAGGCAAAGGAGATTCttcaagaggagagcaaTGTGCAAGCAGTG
CAGTGTCCCGTCACGATATGTGGAGACATCCACGGACAgtTTTACGACCT
TCTGGAGCTTTTCCTCATCGGTGGAGACTGTCCAGACACCAACTACTTAT
TCATGGGCGATTACGTTGACCGAGGCTTTTATTCGGTGGAAGTGGCTTCG
CTCCTGATTGCGCTCAAGGTCCGTCATCGACATAGGATCACGATCCTGCG
GGGGAATCACGAGTCTCGGCAAATCACGCaggTGTATGGCTTTTACGACG
AATGTCAGCGGAAAatggcccctccttctgttTACGACCCTGGTCTTCTA
GAAGCACACATTGAATCCTTGCGCAAAGGACAAATTCTACCTGAGAACGT
AGTGTGGAGTTTGTGCGAAAAGGCAAAGGAGATTCttcaagaggagagca
aTGTGCAAGCAGTGCAGTGTCCCGTCACGATATGTGGAGACATCCACGGA
CAgtTTTACGACCTTCTGGAGCTTTTCCTCATCGGTGGAGACTGTCCAGA
CACCAACTACTTATTCATGGGCGATTACGTTGACCGAGGCTTTTATTCGG
TGGAAGTGGCTTCGCTCCTGATTGCGCTCAAGGTCCGTCATCGACATAGG
ATCACGATCCTGCGGGGGAATCACGAGTCTCGGCAAATCACGCaggTGTA
TGGCTTTTACGACGAATGTCAGCGGAAAatggcccctccttctgttTACG
ACCCTGGTCTTCTAGAAGCACACATTGAATCCTTGCGCAAAGGACAAATT
CTACCTGAGAACGTAGTGTGGAGTTTGTGCGAAAAGGCAAAGGAGATTCt
tcaagaggagagcaaTGTGCAAGCAGTGCAGTGTCCCGTCACGATATGTG
GAGACATCCACGGACAgtTTTACGACCTTCTGGAGCTTTTCCTCATCGGT
GGAGACTGTCCAGACACCAACTACTTATTCATGGGCGATTACGTTGACCG
AGGCTTTTATTCGGTGGAAGTGGCTTCGCTCCTGATTGCGCTCAAGGTCC
GTCATCGACATAGGATCACGATCCTGCGGGGGAATCACGAGTCTCGGCAA
ATCACGCaggTGTATGGCTTTTACGACGAATGTCAGCGGAAAatggcccc
tccttctgttTACGACCCTGGTCTTCTAGAAGCACACATTGAATCCTTGC
GCAAAGGACAAATTCTACCTGAGAACGTAGTGTGGAGTTTGTGCGAAAAG
GCAAAGGAGATTCttcaagaggagagcaaTGTGCAAGCAGTGCAGTGTCC
CGTCACGATATGTGGAGACATCCACGGACAgtTTTACGACCTTCTGGAGC
TTTTCCTCATCGGTGGAGACTGTCCAGACACCAACTACTTATTCATGGGC
GATTACGTTGACCGAGGCTTTTATTCGGTGGAAGTGGCTTCGCTCCTGAT
TGCGCTCAAGGTCCGTCATCGACATAGGATCACGATCCTGCGGGGGAATC
ACGAGTCTCGGCAAATCACGCaggTGTATGGCTTTTACGACGAATGTCAG
CGGAAAatggcccctccttctgttTACGACCCTGGTCTTCTAGAAGCACA
CATTGAATCCTTGCGCAAAGGACAAATTCTACCTGAGAACGTAGTGTGGA
GTTTGTGCGAAAAGGCAAAGGAGATTCttcaagaggagagcaaTGTGCAA
GCAGTGCAGTGTCCCGTCACGATATGTGGAGACATCCACGGACAgtTTTA
CGACCTTCTGGAGCTTTTCCTCATCGGTGGAGACTGTCCAGACACCAACT
ACTTATTCATGGGCGATTACGTTGACCGAGGCTTTTATTCGGTGGAAGTG
GCTTCGCTCCTGATTGCGCTCAAGGTCCGTCATCGACATAGGATCACGAT
CCTGCGGGGGAATCACGAGTCTCGGCAAATCACGCaggTGTATGGCTTTT
ACGACGAATGTCAGCGGAAA back to top
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