EWM22533.1, cds8144 (CDS) Nannochloropsis gaditana

Overview
NameEWM22533.1
Unique Namecds8144
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:740968..741075 +
Alignment locationKK037247.1:741380..741460 +
Alignment locationKK037247.1:741701..741796 +
Alignment locationKK037247.1:742049..742144 +
Alignment locationKK037247.1:742421..742453 +

Link to JBrowse

Properties
Property NameValue
End range.
End range742453
Protein idEWM22533.1
Productprotein phosphatase 2a catalytic subunit
Partialtrue
Orig transcript idgnl|cribi|Naga_100290g7.9872.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:740968..741075 +
KK037247.1supercontigKK037247.1:741380..741460 +
KK037247.1supercontigKK037247.1:741701..741796 +
KK037247.1supercontigKK037247.1:742049..742144 +
KK037247.1supercontigKK037247.1:742421..742453 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_apaH
IPR029052Metallo-depent_PP-like
IPR006186Ser/Thr-sp_prot-phosphatase
Homology
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|585103058|gb|EWM22533.1| (protein phosphatase 2a catalytic subunit, partial [Nannochloropsis gaditana])

HSP 1 Score: 288.5 bits (737), Expect = 9.296e-99
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:    1 MAPPSVYDPGLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            MAPPSVYDPGLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK
Sbjct:    1 MAPPSVYDPGLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|302854724|ref|XP_002958867.1| (protein phosphatase 2A catalytic subunit [Volvox carteri f. nagariensis] >gi|300255769|gb|EFJ40055.1| protein phosphatase 2A catalytic subunit, partial [Volvox carteri f. nagariensis])

HSP 1 Score: 204.527 bits (519), Expect = 4.112e-65
Identity = 99/129 (76.74%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:   10 GLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            G L++HI+ L K + LPE  V +LCEKAKEIL EESNVQ V+CPVT+CGDIHGQF DL+ELF IGGD P+TNYLFMGDYVDRG++SVE  SLL+ALKVR R RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   11 GDLDSHIQKLLKCEPLPEADVKALCEKAKEILAEESNVQPVRCPVTVCGDIHGQFNDLVELFRIGGDSPNTNYLFMGDYVDRGYHSVETVSLLVALKVRFRDRITILRGNHESRQITQVYGFYDECLRK 139
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|299115118|emb|CBN75485.1| (conserved unknown protein (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 209.534 bits (532), Expect = 4.495e-65
Identity = 100/129 (77.52%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:   10 GLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
             +L+  I+ LR G ILPE  + SLC+KA+EIL  ESNVQ V+CPVTICGDIHGQFYDLLELF IGGDCP TNYLFMGDYVDRG+YS+EV SLL+ALKVR + RITILRGNHESRQITQVYGFYDEC RK
Sbjct:    8 AILDKQIDVLRTGGILPEKDILSLCQKAREILGSESNVQPVRCPVTICGDIHGQFYDLLELFRIGGDCPSTNYLFMGDYVDRGYYSLEVVSLLVALKVRFKDRITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|695413368|ref|XP_009526013.1| (hypothetical protein PHYSODRAFT_346049 [Phytophthora sojae] >gi|348677138|gb|EGZ16955.1| hypothetical protein PHYSODRAFT_346049 [Phytophthora sojae])

HSP 1 Score: 209.149 bits (531), Expect = 5.670e-65
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:   12 LEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            L+A IE LR+ + L E  ++ LC+KAKEIL  ESNVQ V+CPVT+CGDIHGQFYDLLELF IGG CPDTNYLFMGDYVDRG+YS+E  +LL+ALKVRHR RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   10 LDAQIERLRRAENLTETEIYELCQKAKEILSGESNVQPVRCPVTVCGDIHGQFYDLLELFRIGGACPDTNYLFMGDYVDRGYYSLESVALLVALKVRHRERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|1214708102|gb|OWZ19422.1| (Serine/threonine-protein phosphatase [Phytophthora megakarya])

HSP 1 Score: 209.149 bits (531), Expect = 6.052e-65
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:   12 LEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            L+A IE LR+ + L E  ++ LC+KAKEIL  ESNVQ V+CPVT+CGDIHGQFYDLLELF IGG CPDTNYLFMGDYVDRG+YS+E  +LL+ALKVRHR RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   10 LDAQIERLRRAENLTETEIYELCQKAKEILAGESNVQPVKCPVTVCGDIHGQFYDLLELFRIGGACPDTNYLFMGDYVDRGYYSLESVALLVALKVRHRERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|675195195|ref|XP_008906482.1| (serine/threonine-protein phosphatase PP2A [Phytophthora parasitica INRA-310] >gi|566023070|gb|ETI45981.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica P1569] >gi|567960365|gb|ETK85926.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|567989102|gb|ETL39370.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|568018310|gb|ETL92485.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|568048776|gb|ETM45806.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|568093398|gb|ETN08194.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica INRA-310] >gi|570326726|gb|ETO74674.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica P1976] >gi|570950498|gb|ETP15755.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica CJ01A1] >gi|570984179|gb|ETP43842.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica P10297] >gi|970637521|gb|KUF81528.1| Serine/threonine-protein phosphatase [Phytophthora nicotianae])

HSP 1 Score: 209.149 bits (531), Expect = 6.390e-65
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:   12 LEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            L+A IE LR+ + L E  ++ LC+KAKEIL  ESNVQ V+CPVT+CGDIHGQFYDLLELF IGG CPDTNYLFMGDYVDRG+YS+E  +LL+ALKVRHR RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   10 LDAQIERLRRAENLTETEIYELCQKAKEILAGESNVQPVKCPVTVCGDIHGQFYDLLELFRIGGACPDTNYLFMGDYVDRGYYSLESVALLVALKVRHRERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|673054297|ref|XP_008881109.1| (serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Aphanomyces invadans] >gi|574463165|gb|ETV90258.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Aphanomyces invadans])

HSP 1 Score: 208.764 bits (530), Expect = 9.689e-65
Identity = 99/127 (77.95%), Postives = 108/127 (85.04%), Query Frame = 0 
Query:   12 LEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            L+  I  LR+ + L EN V  LC+KAKEIL  ESNVQ V+CPVT+CGDIHGQFYDLLELF IGG CPDTNYLFMGDYVDRG+YS+E  SLL+ALKVRHR RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   12 LDEQISRLRRAENLTENEVMELCKKAKEILSAESNVQPVRCPVTVCGDIHGQFYDLLELFCIGGQCPDTNYLFMGDYVDRGYYSLESVSLLVALKVRHRERITILRGNHESRQITQVYGFYDECLRK 138
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|698824061|ref|XP_009845059.1| (serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Aphanomyces astaci] >gi|574099853|gb|ETV65448.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Aphanomyces astaci])

HSP 1 Score: 208.764 bits (530), Expect = 1.012e-64
Identity = 99/127 (77.95%), Postives = 108/127 (85.04%), Query Frame = 0 
Query:   12 LEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            L+  I  LR+ + L EN V  LC+KAKEIL  ESNVQ V+CPVT+CGDIHGQFYDLLELF IGG CPDTNYLFMGDYVDRG+YS+E  SLL+ALKVRHR RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   12 LDEQISRLRRAENLTENEVMDLCKKAKEILSAESNVQPVRCPVTVCGDIHGQFYDLLELFCIGGQCPDTNYLFMGDYVDRGYYSLESVSLLVALKVRHRERITILRGNHESRQITQVYGFYDECLRK 138
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|1072230693|gb|OEU15426.1| (serine/threonine protein phosphatase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 208.379 bits (529), Expect = 1.162e-64
Identity = 99/129 (76.74%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:   10 GLLEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            G ++  IE LRKG  LPEN V +LCEKAKEILQ+ESNVQ V  PVT+CGDIHGQFYDL ELF IGG CP+TNYL MGDYVDRG++S+E  +LLIALKVR+R+RITILRGNHESRQITQVYGFYDEC RK
Sbjct:    5 GEIDEQIERLRKGNTLPENEVKALCEKAKEILQDESNVQPVAAPVTVCGDIHGQFYDLAELFRIGGKCPETNYLLMGDYVDRGYFSLETVTLLIALKVRYRNRITILRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of EWM22533.1 vs. NCBI_GenBank
Match: gi|953494253|emb|CEG43847.1| (serine threonine-protein phosphatase pp2a [Plasmopara halstedii])

HSP 1 Score: 208.379 bits (529), Expect = 1.200e-64
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:   12 LEAHIESLRKGQILPENVVWSLCEKAKEILQEESNVQAVQCPVTICGDIHGQFYDLLELFLIGGDCPDTNYLFMGDYVDRGFYSVEVASLLIALKVRHRHRITILRGNHESRQITQVYGFYDECQRK 138
            L+A IE LR+ + L E  ++ LC+KAKEIL  ESNVQ V+CPVT+CGDIHGQFYDLLELF IGG CPDTNYLFMGDYVDRG+YS+E  +LL+ALKVRHR RITILRGNHESRQITQVYGFYDEC RK
Sbjct:   10 LDAQIERLRRAENLTETEIYELCQKAKEILAGESNVQPVKCPVTVCGDIHGQFYDLLELFRIGGVCPDTNYLFMGDYVDRGYYSLESVALLVALKVRHRERITILRGNHESRQITQVYGFYDECLRK 136
The following BLAST results are available for this feature:
BLAST of EWM22533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103058|gb|EWM22533.1|9.296e-99100.00protein phosphatase 2a catalytic subunit, partial ... [more]
gi|302854724|ref|XP_002958867.1|4.112e-6576.74protein phosphatase 2A catalytic subunit [Volvox c... [more]
gi|299115118|emb|CBN75485.1|4.495e-6577.52conserved unknown protein (Partial), partial [Ecto... [more]
gi|695413368|ref|XP_009526013.1|5.670e-6577.17hypothetical protein PHYSODRAFT_346049 [Phytophtho... [more]
gi|1214708102|gb|OWZ19422.1|6.052e-6577.17Serine/threonine-protein phosphatase [Phytophthora... [more]
gi|675195195|ref|XP_008906482.1|6.390e-6577.17serine/threonine-protein phosphatase PP2A [Phytoph... [more]
gi|673054297|ref|XP_008881109.1|9.689e-6577.95serine/threonine-protein phosphatase 2A catalytic ... [more]
gi|698824061|ref|XP_009845059.1|1.012e-6477.95serine/threonine-protein phosphatase 2A catalytic ... [more]
gi|1072230693|gb|OEU15426.1|1.162e-6476.74serine/threonine protein phosphatase [Fragilariops... [more]
gi|953494253|emb|CEG43847.1|1.200e-6477.17serine threonine-protein phosphatase pp2a [Plasmop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8168rna8168Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications