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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100017g7.350.mrna |
| Orig protein id | gnl|cribi|Naga_100017g7.350 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:489438..490608 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna816 ID=rna816|Name=rna816|organism=Nannochloropsis gaditana|type=mRNA|length=4031bp
CACAGGCGGGTCATGGATACAGGAAGGGGGGCCGACGGTAATCCCACGGG
AGGTGACACGAAGCCAGTGCTTCTTCCTCCCGTAGCATCAAAAAAGAGCC
CAGCGGGTCAGCAACCCTTTCCCAAATTGAAAGTAACGACACCGGCGACG
TCGACCCCGCAAGACACCCCGTTGCGACTATCAATGTCTAGCGATGCAGT
ACAGGACTCTAAAAGAGATGTGCCCATTGCAGCCGGAAAGAAATCGTTGT
CAAGCCTGTCGGAGAAAGTCTCATTACCAGAGGCGGCGTCAGGAACAGGA
ATAGCGTTGGTAGACAAATACAAGGCCAATGTAGACGATGCCAGCAAGAA
GCGAGGACTACCGGCACTAAGAATTGGCAGTATCGAAGCAGGGAGAGCAG
CTACGGAGGACAAGAAGAAAAAGATCAAGTTGGTGGCCCAGGCGGGTAAA
TCCGGGAGTCAACCAATAGTTCCGGCCTTACATCTCAAGAACATTGCACC
TGGAAATTCGTCGGGAACCGCCAGTGTACCAACAATATTGAGTGGTAGAG
AATCAGTGAAATCACGCCCTGTAGTCATTAGCACGGACTCCGAGGCTGCA
CCCGTTCCGGCTCTGCATGTGACAGCCTCTGCGCACATTCCAACTCCCTG
CCCATTTCCACCCGTGTCAGCGCCGTCGCAGGCGGCCGTGGTCGCGTCTT
CCCCTGTAAACGACCGAAGCAGCCCCGCAATGGCCCCGCTGCCGCCTCCG
TCACCCTCCTCGGCGCCGATGGCGGGATCGTCCGACCCGGCGCTCCACGA
GGAAGCGACTCCAGTACCCGCCATCCCCGACGTGGCCAGCCATGTCAAAG
TGCAGCCGGTAGGCTCCCCAAAAAGCAAGGAGCTGGTGCCTGCGCGAGGG
CCTCCCGTTGGCAACGCGGCTGGCCGCATGCTTATCAAGCGCGGCCTGCG
TGCAGGGGACCCACGGGCGTTCATCCAACGCTTTCAGGAGGAAAACGGTC
TCCGGGGGATCCCGGAGGCACGCCCCGCCCTGCAGTTGCTCGATGTCCTG
GGAGTTTCCCGCCTGCAGGTCTACCGACACCTGCTGGCGGACCTCCGGGC
CCGGCTGGTGGACCGGCTCGACCGGTGTCAAGACCAGGCCCAGCTCGAGC
GCCTCCTCGCCCACTCCTTCGGCTATTTGACCGTCCCTGAACTCCGCACC
GTCCCCGAGCGGATCATTACCAAGTTGCGCCGGATTCCGTCCCGGATTTT
GGATCGTCTGGCCGCGCGCCCCGGGCTTCTGGAGGAATTGCCGATGCGAG
TCAAGCAGCAGGTCTGGGAAGCCCATCCGGCCTTATTCCGGCGGGGGCTG
GGCGCGATCCTGGAAGAATACGTCCGGCATCGGGCCTCGGTGATGATGCC
TGCCTACGACGTGGTTGCCCTGCTCTCTTTGTCCTCCACTCCCTCCCCTT
CCGCCGCGGGCGCTCCGGGCAAGGAGGTGTCACCCAGCAAACGCCGCCAA
GAGAACCCTTGTCTCGCCCACCTCGTGGCCTGCGTGAACACCGAGGATGA
CTCCAAGCTGGATCAAGTCGCCTCACACTTTATAATCGACGAATATGTTT
CCAAGGGGGACCCTACGCTTTGTACGCTCTTCGCCGACTTTCAAGTCCAG
CTCGCGCACGTTCGGTCGGGGCGGGCCGCCGTCATCAGCCGGCTCACCCA
CTTGGCCCGGGCCCTGGAGGAGTGGGTAAAAGCGGGACGCGTGGAGGCCA
AGGCACTGGCCCAGGTGCAGGTACACTTGCGGGCGATGTTGTCAAGCTCC
GGCACAGGGGCTGGGCGGGGCGTTACCCCTATGTCGCTCTCTTCGAAGAA
GGAGAAAAAGAGGAAAGAGGCCGACATTACGAGCAGCGGCTTGACACTGA
AGTTGCCTCGTGCTGCGCTCTCTACTCCAGTCGCCGAAAAGTCATGGGCG
AAAATTCCAACGTTGGAGCAGGCATTAGAGGAAGGGATGGGGTATCTACT
GAAGCTGGACGCACCGACCCGCTGGTTCGCCAAGCCGGTATTGGAACTGT
GGCCTCAGATTCAGGAGGCGTATTTGGCCGTCGTGCCTCACCCAATGGAT
CTGGAAAGCATGCGCAAACGGGTCAAGGCGTCTGTCGGAGGGGTTGGGGA
AAAAGAAAGGGGAGGGACGGCGGGGTATTCGACATTTGCCGCTTTCGACA
GTGACGCGGAGCGTGTCTTTGATAACTGTATGGCGTTCAATCCTCCGGGG
AGTGCCTTCCACTCAGGAGCGGAGCGAATGAAGAAAGCCTGGGGGAAATT
CAAGGTTAAATTTGAGAAAACAGACGTGAAAAGGGCCATGGATCGAAAGA
AAGGCGCGGTGGGTGCGGGGGGGCTGGGCGACGGGAGCGGGCTCGTCACC
AAGGCCACCACATCCACCTTTGTGGGTGCGGGGGACGAGGCAGAGCTCCT
TTCGGCGGCTGGAAGAGGCACGGACAAGGCGCGGGATCCCACGGTTCCGG
AAGCGTTGCCTGGTAGGCCCCGGGTGGAGGCCCCAACGTGGGGGCATGCC
TTGATGCTCCTGGCCGACCCCTGCGTGTTGCAGGTGCTGGGCAAGACCCT
CAAACAGGAGTTAGACGAGGTCTTCCGGTCGCAGGGTCTCCCCAAGGATC
ATCCGCGGGTTCCCTCCCTCCTTCAACTTCTTTACCTTGGGCTAGACGCT
CGGCGGCAATTGGCTCTGGTGCGGCTGAAAACCAAGGCAGGCGTTCCCCC
GCCTCCCCCCCCGACAGAACCCCTGCACAAAAAGGGAAACAAGAAGGGTA
AGACCGCTCCTTCCCCTCCCGAACTTCCTCCCTGCTTCTCAATTCCGGAC
GCAAGAGTCTCTTTTTGGGGTTTTGGAGACAAAGAGGGGGAGCCGGCAGC
GGAGAATGATGTGCAAGAAGCAGTCCGGACTGTGTTGCCCAGCCTCTTGG
AGGTCAACGCGTACGTAAAAGTGGCGAACAAATACGCCACAGCGACGGAT
GGATGGGAAGGGCAGCCGCACGATAAAGATGAGATTGAAGGGAAGATGTT
GGAGAGCGTGGGGCGTTTGTACCGGGCGTGCAAGGCAAGGCAGCCTTCTC
CCTTGCTCTTGTGCGTGCTCACACATGCTCTCTGTCACAGCCTGGCTACT
GGGGACGATGATCGGACGACGCCCTTGGCCAAGACGCTGGCCGCCTTGCT
GGATCACTTGAACCGGAAGAGAAGGAGCGAGATGACGTTGGCGCTCCCAG
ACATGCAGGACCGCGCCCTGTGGATCGGCTTGGCGAGTGCCGGGCTCTTG
CGGGTCCCGAAAAAGAAAAACAAGGCGGCATTGGCAGGAGAGAAGGCGAA
TCGGGCCGGCGCCACGCGGGCTGGACCTGTGGGCGCGGGGATGCCTGCTG
TAGGCGGTGCTGGCGTGGGTGCCGACAGGAAGGCGCACGCGACGGCCTCC
ACGTCGGCCTCGGCTCGTCCACCCTTGGAGCCAGAGCTTAGGGACCTGAT
TTTGGGTATTTTTGTAAACCAGCTGCCCTTTGCTTGTTCACCTCGATCTA
TTTCCTTTTGCCACGAGCAGGTGCTGCGCTTACTTTTAGGGTGGATGGCG
CGGGGGGCTTTGGAACCGCCGAAGGGAAAAGAAGGCAGGGAGGAGGGGAA
GGATGGAATAGGGAAGCGGACGGTCAGGAATTGGGTGGAGGGGATCGTGC
AGGGTGTAGGGGGCCACAAGGCGATGTGGGAGGTGTGGGAGAAGGAGGAG
TTCAAGTGCCTGCGCAGGCAGTACGAGAGGCTGTTCGAGGCGACGCCCTG
GGCCCGCGGCGTAGTCTTGGGCGAAGGAGGGGCCGGAGTGGTGTCCGAGA
GCGCAGGCCCGGATGGAGTCCGGGCAGATGAAAGCGAACAGCAAAAGAAG
ATGGAGCCTCTGGGAGGAAAAGCAGCAGATGACAAGTGACTAGAAGAGCT
GGCAGCGTAGGCCTCGTCCCTTCCCTTCGGAAGGAAAATCATTCAAATAA
TCCATAAAGCAGCTAGCACAGACCTTTCTCG back to topprotein sequence of rna816 >rna816-protein ID=rna816-protein|Name=rna816|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MAQGLAKLSKKGFSQKSKKAHAKASSKRTAAKKGNPTQLPKNIQRRGMAL
EQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELS
RKKSRVEEKLAELQAKVEEAS back to topmRNA from alignment at CM002456.1:489438..490608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna816 ID=rna816|Name=rna816|organism=Nannochloropsis gaditana|type=mRNA|length=1171bp|location=Sequence derived from alignment at CM002456.1:489438..490608+ (Nannochloropsis gaditana)
GTGAGCGAGCGAGGAGTCTGTCACAAGACCCAGAGCGGTGAGTTGAGCTT
ATTCCAAAGCAGTGCTAAATCACTGTCTCATACTGGTACCATTCTTGCAC
CAGGCCGTACGTTCGGGGGCATTGTGTACCTGTAGCTgaaagaaagcgga
ggatAAGAGTAGGCAACAGCCCTGCGGAGGATACTCCATACGTACTGTAT
TGTACACTGTGCCCTGGCACTTAACGAGGACCGCTTCACAAGTATCGTAA
GGTACCAAAATATCTATAGACGACCATAATTTGATGGCGCAAGGCCTCGC
GAAGCTGAGCAAGAAGGGTTTTTCTCAGAAAAGTAAAAAAGCTCATGCCA
AAGCTAGCAGCAAACGGACGGCAGCAAAGAAAGGAAGTAAGTAAACTTGT
TGTTTCATTTTCTTGATGTAGCGCCTGTCCTATGAAAATCAAGAGCTAGG
CTTAACATGTGGTGTGCCAGGAAGTTTATTCTAGAAGCGTTTCATACTGT
GACTTATGTCTTTCCTGCGCCGCGTCGTTGGCTTCTGCGAGGTCCACTCA
TGTTTTCATTCTACACCATCGACAGACCCCACCCAGTTACCAAAAAATAT
TCAGCGGCGGGGCATGGCCCTGGAGCAAGCTCGGATCACAAAGGCAATAA
ATCAAAATGTTGAAAGAGTGTCTTCGGCTCGAGCACTCAAAGCAGGGGAT
ACATTTTCTATGCAGGATGTTAAAAGAATTGGCAAGGAAATGAATCGAGA
TATGCGGCGGGAGGAGTTGTCACGGAAGAAGAGTCGTGTTGAGGAAAAGC
TGGCCGAGCTACAGGCGAAAGTAGAGGAGGCGTCTTAAGGTCCACTCTGC
AAGAGAAGATGGAAAATATGTAGAAAAACAATACTTACTTATGAAAACGT
ACAGAAAGTCGTCTCACCAATGAGAAATGTCTTCTTGTGGATAAATATAA
GCTAAAAATGCCATATTTTTGTTGATGGCCACCTTTCAAATGTACACTcc
aatttttccttcccagcgACACAAAAGGGGATGGAATGGTCGCCTCCCAA
TCCTTATCAACAATTCGACGTTTGACTAAATGTTTCTGAAAAGGAAGTAC
GCGTGCTCTCAAGTTAAAGCCCAAATCgaatggaaaaaaagtaAGTTCTG
CGGCAGCCGTCGACTACAAAC back to topCoding sequence (CDS) from alignment at CM002456.1:489438..490608+ >rna816 ID=rna816|Name=rna816|organism=Nannochloropsis gaditana|type=CDS|length=732bp|location=Sequence derived from alignment at CM002456.1:489438..490608+ (Nannochloropsis gaditana)
ATGGCGCAAGGCCTCGCGAAGCTGAGCAAGAAGGGTTTTTCTCAGAAAAG
TAAAAAAGCTCATGCCAAAGCTAGCAGCAAACGGACGGCAGCAAAGAAAG
GAAACCCCACCCAGTTACCAAAAAATATTCAGCGGCGGGGCATGGCCCTG
GAGCAAGCTCGGATCACAAAGGCAATAAATCAAAATGTTGAAAGAGTGTC
TTCGGCTCGAGCACTCAAAGCAGGGGATACATTTTCTATGCAGGATGTTA
AAAGAATTGGCAAGGAAATGAATCGAGATATGCGGCGGGAGGAGTTGTCA
CGGAAGAAGAGTCGTGTTGAGGAAAAGCTGGCCGAGCTACAGGCGAAAGT
AGAGGAGGCGTCTTAAATGGCGCAAGGCCTCGCGAAGCTGAGCAAGAAGG
GTTTTTCTCAGAAAAGTAAAAAAGCTCATGCCAAAGCTAGCAGCAAACGG
ACGGCAGCAAAGAAAGGAAACCCCACCCAGTTACCAAAAAATATTCAGCG
GCGGGGCATGGCCCTGGAGCAAGCTCGGATCACAAAGGCAATAAATCAAA
ATGTTGAAAGAGTGTCTTCGGCTCGAGCACTCAAAGCAGGGGATACATTT
TCTATGCAGGATGTTAAAAGAATTGGCAAGGAAATGAATCGAGATATGCG
GCGGGAGGAGTTGTCACGGAAGAAGAGTCGTGTTGAGGAAAAGCTGGCCG
AGCTACAGGCGAAAGTAGAGGAGGCGTCTTAA back to top
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