EWM29852.1, cds816 (CDS) Nannochloropsis gaditana

Overview
NameEWM29852.1
Unique Namecds816
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:489721..489823 +
Alignment locationCM002456.1:490013..490275 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29852.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100017g7.350.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:489721..489823 +
CM002456.1supercontigCM002456.1:490013..490275 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|585112433|gb|EWM29852.1| (hypothetical protein Naga_100017g7 [Nannochloropsis gaditana])

HSP 1 Score: 238.424 bits (607), Expect = 1.693e-79
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query:    1 MAQGLAKLSKKGFSQKSKKAHAKASSKRTAAKKGNPTQLPKNIQRRGMALEQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEEAS 121
            MAQGLAKLSKKGFSQKSKKAHAKASSKRTAAKKGNPTQLPKNIQRRGMALEQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEEAS
Sbjct:    1 MAQGLAKLSKKGFSQKSKKAHAKASSKRTAAKKGNPTQLPKNIQRRGMALEQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEEAS 121          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|1173927735|gb|OQR81568.1| (hypothetical protein THRCLA_23343 [Thraustotheca clavata])

HSP 1 Score: 63.929 bits (154), Expect = 1.269e-10
Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 0
Query:   34 GNPT----QLPKNIQRRGMALEQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEEA 120
            GNPT    +     ++RG     A +T  IN N+E++ ++R L+AG +  +QDVK+ GKE  +++ +   ++KKSRVEEKLAE++  ++EA
Sbjct:   40 GNPTVEVRRGCNGFKKRG----DATVTGFINNNIEQIMASRVLQAGSSIMLQDVKKAGKERLKEINQSARTKKKSRVEEKLAEVEKSIKEA 126          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|695392234|ref|XP_009520273.1| (hypothetical protein PHYSODRAFT_344843 [Phytophthora sojae] >gi|348685170|gb|EGZ24985.1| hypothetical protein PHYSODRAFT_344843 [Phytophthora sojae])

HSP 1 Score: 64.3142 bits (155), Expect = 1.367e-10
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 0
Query:    1 MAQGLAKLSKKG-------FSQKSKKA----HAKASSKRTAAKKGNPTQLPKNIQR--RGMALEQAR-ITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEE 119
            MAQG   L KKG        S+ SKKA    H K+++K T  KKGNPT     I+R   GM    ++ +T  INQN+E + ++R L+AG T ++ DVK  GKE  +++ +   ++KKSRV +KLA L+  ++E
Sbjct:    1 MAQGSGYL-KKGKKSVKNAGSKPSKKAVSYSHKKSAAKFT--KKGNPTT---EIRRGCSGMKNNGSKAVTGFINQNLENIMASRVLQAGTTLALSDVKAHGKERLKEINQHARTKKKSRVAQKLAALERSIKE 127          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|567968688|gb|ETK93814.1| (hypothetical protein L915_03074 [Phytophthora parasitica] >gi|570334689|gb|ETO82637.1| hypothetical protein F444_03262 [Phytophthora parasitica P1976] >gi|970660668|gb|KUF98197.1| hypothetical protein AM588_10007490 [Phytophthora nicotianae])

HSP 1 Score: 63.5438 bits (153), Expect = 2.856e-10
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0
Query:    1 MAQGLAKL--SKKGF----SQKSKKA----HAKASSKRTAAKKGNPTQLPKNIQR--RGMALEQAR-ITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEE 119
            MAQG   L   KKG     S+ SKKA    H K+++K T  KKGNPT     I+R   GM    ++ +T  INQN+E + ++R L+AG + ++ DVK  GKE  +++ +   ++KKSRV +KLA L+  +++
Sbjct:    1 MAQGSGYLKKGKKGVKNAGSRPSKKAVSYSHKKSAAKFT--KKGNPTT---EIRRGCSGMKNHGSKAVTGFINQNLENIMASRVLQAGTSLALSDVKAHGKERLKEINQHARTKKKSRVAQKLAALERSIKD 127          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|953497594|emb|CEG41081.1| (hypothetical protein PHALS_11250 [Plasmopara halstedii])

HSP 1 Score: 62.7734 bits (151), Expect = 6.024e-10
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0
Query:    1 MAQGLAKLSKKG-------FSQKSKKA----HAKASSKRTAAKKGNPTQLPKNIQ-RRGMALEQAR----ITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEE 119
            MAQG   L KKG        S+ SKKA    H K+++K T  KKGNPT     I+ RRG +  +      +T  INQN+E + ++R L+AG T +++DVK  GKE  +++ ++  ++KKSRV +KLA L+  +++
Sbjct:    1 MAQGNGYL-KKGKKNVKNIGSKPSKKAVSYSHKKSAAKFT--KKGNPT-----IEIRRGCSGMKNHGSKAVTGFINQNLENIMASRVLQAGTTLALRDVKAHGKERLKEINQQARTKKKSRVAQKLAALERSIKD 127          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|675183005|ref|XP_008900387.1| (hypothetical protein PPTG_07774 [Phytophthora parasitica INRA-310] >gi|566031043|gb|ETI53954.1| hypothetical protein F443_03195 [Phytophthora parasitica P1569] >gi|567997118|gb|ETL47208.1| hypothetical protein L916_03044 [Phytophthora parasitica] >gi|568026314|gb|ETM00307.1| hypothetical protein L917_02973 [Phytophthora parasitica] >gi|568056780|gb|ETM53486.1| hypothetical protein L914_03042 [Phytophthora parasitica] >gi|568099395|gb|ETN14109.1| hypothetical protein PPTG_07774 [Phytophthora parasitica INRA-310] >gi|570958783|gb|ETP23762.1| hypothetical protein F441_03175 [Phytophthora parasitica CJ01A1] >gi|570994649|gb|ETP51725.1| hypothetical protein F442_03177 [Phytophthora parasitica P10297] >gi|970656431|gb|KUF94443.1| hypothetical protein AM587_10012794 [Phytophthora nicotianae])

HSP 1 Score: 62.003 bits (149), Expect = 9.030e-10
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 0
Query:    1 MAQGLAKL--SKKGF----SQKSKKA----HAKASSKRTAAKKGNPTQLPKNIQR--RGMALEQAR-ITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEE 119
            MAQG   L   K+G     S+ SKKA    H K+++K T  KKGNPT     I+R   GM    ++ +T  INQN+E + ++R L+AG + ++ DVK  GKE  +++ +   ++KKSRV +KLA L+  +++
Sbjct:    1 MAQGSGYLKKGKRGVKNAGSRPSKKAVSYSHKKSAAKFT--KKGNPTT---EIRRGCSGMKNHGSKAVTGFINQNLENIMASRVLQAGTSLALSDVKAHGKERLKEINQHARTKKKSRVAQKLAALERSIKD 127          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|673033532|ref|XP_008870727.1| (hypothetical protein H310_07166 [Aphanomyces invadans] >gi|574473589|gb|ETW00592.1| hypothetical protein H310_07166 [Aphanomyces invadans])

HSP 1 Score: 60.8474 bits (146), Expect = 2.033e-9
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    1 MAQGLAKLSKKGF---SQKSKKAHAKASSKRTAAKK----GNPTQLPK----NIQRRGMALEQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEEA 120
            MAQG   L KK     + K  KA  +   K  +AKK    GN T   +      +RRG     A +T  IN+N+E + +AR L+ G + +++D++ + KE  +++ +   ++K+SRVEEKLAE++  ++EA
Sbjct:    1 MAQGSTTLKKKNVKNAAAKPNKAKVEYRHKLNSAKKFTKVGNATTEVRRGCNGFKRRG----DASVTGFINRNIEELMAARVLQTGSSLALKDIRSVAKERLKEVNKNARTKKRSRVEEKLAEVEKAIKEA 127          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|301104344|ref|XP_002901257.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262101191|gb|EEY59243.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 60.4622 bits (145), Expect = 2.710e-9
Identity = 40/103 (38.83%), Postives = 66/103 (64.08%), Query Frame = 0
Query:   20 AHAKASSKRTAAKKGNPTQLPKNIQR--RGMALEQAR-ITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEE 119
            +H K+++K T  KKGNPT     I+R   GM    ++ +T  INQN+E + ++R L+AG + ++ DVK  GKE  +++ +   +RKKSRV +KLA L+  +++
Sbjct:    6 SHKKSAAKFT--KKGNPTT---EIRRGCNGMKNHGSKAVTGFINQNLENIMASRVLQAGTSLALSDVKAHGKERLKEINQHARTRKKSRVAQKLAALERSIKD 103          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|698786712|ref|XP_009826388.1| (hypothetical protein H257_03821 [Aphanomyces astaci] >gi|574119216|gb|ETV84696.1| hypothetical protein H257_03821 [Aphanomyces astaci])

HSP 1 Score: 58.9214 bits (141), Expect = 9.875e-9
Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    1 MAQGLAKLSKKGF---SQKSKKAHAKASSKRTAAKK----GNPTQLPK----NIQRRGMALEQARITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEEA 120
            MAQG   L KK     + K  K + +   K  +AKK    GN T   +      +RRG     A +T  IN+N+E + + R L+ G + +++D++ +GKE  +++ +   ++K+SRVEEKLAE++  +++A
Sbjct:    1 MAQGSTSLKKKNVKNAAAKPTKNNVQYRHKLNSAKKFTKVGNATTEVRRGCNGFKRRG----DASVTGFINRNIEELMATRVLQTGSSIALKDIRAVGKERLKEVNKNARTKKRSRVEEKLAEVEKAIKDA 127          
BLAST of EWM29852.1 vs. NCBI_GenBank
Match: gi|1214698264|gb|OWZ11326.1| (hypothetical protein PHMEG_00015666 [Phytophthora megakarya])

HSP 1 Score: 58.5362 bits (140), Expect = 2.261e-8
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    1 MAQGLAKLSKKG-------FSQKSKKA----HAKASSKRTAAKKGNPTQLPKNIQR--RGMALEQAR-ITKAINQNVERVSSARALKAGDTFSMQDVKRIGKEMNRDMRREELSRKKSRVEEKLAELQAKVEE 119
            MAQG   L KKG        S+ SKKA    H K+++K T  KKGNPT     I+R   GM    ++ +T  INQN+E + ++R L+AG   ++ D+   GKE  +++ +   ++KKSRV +KLA L+  ++E
Sbjct:    1 MAQGSGYL-KKGKKSVKNAGSKPSKKATSYSHKKSAAKFT--KKGNPTT---EIRRGCSGMKNNGSKAVTGFINQNLENIMASRVLQAGTQLALSDIMAHGKERLKEINQHARTKKKSRVAQKLAALERSIKE 127          
The following BLAST results are available for this feature:
BLAST of EWM29852.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112433|gb|EWM29852.1|1.693e-79100.00hypothetical protein Naga_100017g7 [Nannochloropsi... [more]
gi|1173927735|gb|OQR81568.1|1.269e-1039.56hypothetical protein THRCLA_23343 [Thraustotheca c... [more]
gi|695392234|ref|XP_009520273.1|1.367e-1040.60hypothetical protein PHYSODRAFT_344843 [Phytophtho... [more]
gi|567968688|gb|ETK93814.1|2.856e-1039.39hypothetical protein L915_03074 [Phytophthora para... [more]
gi|953497594|emb|CEG41081.1|6.024e-1039.26hypothetical protein PHALS_11250 [Plasmopara halst... [more]
gi|675183005|ref|XP_008900387.1|9.030e-1038.64hypothetical protein PPTG_07774 [Phytophthora para... [more]
gi|673033532|ref|XP_008870727.1|2.033e-934.35hypothetical protein H310_07166 [Aphanomyces invad... [more]
gi|301104344|ref|XP_002901257.1|2.710e-938.83conserved hypothetical protein [Phytophthora infes... [more]
gi|698786712|ref|XP_009826388.1|9.875e-932.82hypothetical protein H257_03821 [Aphanomyces astac... [more]
gi|1214698264|gb|OWZ11326.1|2.261e-838.35hypothetical protein PHMEG_00015666 [Phytophthora ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna816rna816Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications