|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100859g2.2973.mrna |
| Orig protein id | gnl|cribi|Naga_100859g2.2973 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:712832..713894 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8156 ID=rna8156|Name=rna8156|organism=Nannochloropsis gaditana|type=mRNA|length=1254bp
AGCGTTGCTTGTTGCCGTCGAGGGAAGGCACCTTCAGCGCATAAATACAG
GGCGCACATGCAGCGAGAAGGGACACAGAGCCGGAAATGAACTATCTGCA
TGTCACGAAAGATGGTGGTGGTGGTAACAGGATTGTGTTTGGGTGGGATG
CTATGTCTTTGAGCGTTACATGAAAATAGAAGTCTTTTTCTGACTTCCTG
AGTGGTCGCCTCTCACCGTAGCGATTACGACCCCCGCAGTCGCAGACATA
GTACCACTGTGTGCTTTTTAGGAAGAAGGTATATTCGTGCTTTCACGCTT
GACGTCTCGATTTGTGGCAGAGGGTCTTACCTCTGCCAGCATCCACGTGC
ACTCCTTCGACGCAACTGTGAATTACGCTTCCCACAAAGCGGAACATTGT
GTGCTCAAAAGTCTCTTGACACGTTGTGAATCTCATTAGGCCCGTGTCAT
GTGCGCGGGTGTGGACACCAGGTACAAGAGAAACTGTTGCAGAGATGTGC
ATGACCTGTGTGGCCCCCTTCAGGATGGAAGTACCTCTGTGGGGCTCAAT
GTGGCAGCATTCATGCAACCACATGTTGTGCTGTCTTGTCAAAGCTTGAC
TCTCCAGGTCTTTCATCCCGTGGAGGAGTGAGGCTTTCCGGGCGAGGGTG
CACGTCAGGGTGGAACCTTCCTATCCGACCCGTTGTGTGTCTTCGTCATC
ATTGCCACCCTCCTCTTTTACTTGGACGCGTTGATCTCATGCAGTGACCC
GCCACTCCTCAACATTACAGGCATCTTTGTGGTGGCATTGTCCGCTTCTG
CTCTCATTCTGTGCCCCCGCAGCTTGTCTCGCAGGACCACCTCCCACTCT
AACATCTAACCCTCGATTGACACAGACGGTCATGGCGGGATTTTTCGGTG
GAGTAGGGGGCGGAGGGCCATTCGCAGCCATGGGGGGAATGGGCGGACTA
CGGCTGCCGCAAGTCTTCGATGAGGAATATAATTCGTACTCCTTTGTCTT
CCAGGACAAGGCTCATTTGGAAGGCAGTGACAAGATCTTTCTGCCGCCTT
CTGCCCTCGACACGCTGGCCCGCCTCCACATTGACTACCCTATGCTCTTC
CAAATTACGTGCCGGGCTTCGGGGAAGCGGACGCATTGCGGTGTCTTGGA
GTTCTCGGCGGCGGAGGGGAGCTGCTATTTGCCTTATTGGATGATGCAAA
ATCTCCTTTTGGAAGAGGGAGGGTTTCTCCAGGTGGGTATGGACGAGGGT
CGGG back to topprotein sequence of rna8156 >rna8156-protein ID=rna8156-protein|Name=rna8156|organism=Nannochloropsis gaditana|type=polypeptide|length=278bp
MDRVISEMRIVALCLEEGVGRQAALASSPGPLSLGEAQSRWCGLSSIIYR
LTVSLFGPLVVLLVLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGRE
GGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQ
RLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGR
TISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAA
GAHKKPALTKYSSKKGFQSFVGEGNKLS back to topmRNA from alignment at KK037247.1:712832..713894+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8156 ID=rna8156|Name=rna8156|organism=Nannochloropsis gaditana|type=mRNA|length=1063bp|location=Sequence derived from alignment at KK037247.1:712832..713894+ (Nannochloropsis gaditana)
ATGGACCGCGTCATCTCGGAAATGCGCATCGTGGCACTGtgtttggagga
gggggtgggacgTCAGGCGGCTCTCGCGTCTTCTCCTGGGCCCTTGTCTT
TAGGGGAAGCGCAGTCCCGGTGGTGTGGTCTTTCAAGCATTATTTATCGC
CTCACGGTGTCCTTGTTTGGGCCCCTGGTTGTTCTCCTGGTGGTCATCTG
TCTTCgattgcttcctcctcgtccttcgcGTCGCCGTAGTCTCCCCGGAG
GGTGAAAGCAATGTTTAATGCTTTTCTATCTCGTTGTCTTTTGTGTCATC
CTCCAGATACCTGCTTTTTTTAGGGACCTTCTTAACCAAACAAATCCACC
TTGgctcctaccctccttcccctcctccttccctccctcccctcctcctt
cctctccttccccaggtCCTTGACGTGCAACCAAGTGAAGCCGCCTGTAT
CATCGAGACGGATTGCAACGTGGATTTCGAGGCCCCTGTGGGTTACGTGg
agccagggcgggaaggagggagggagggagggaaggctgggggcggggca
agCGCGACGAACGGGGGAGTGATTACTGCGCGGCCCCTGAGTGCGAAAGG
TGGGTACACGGCAGACCACGAAGCCGCGGCCGCTGCGGCCGCAAAACGAC
AGTCGTCTTTCCTGGGCTCGGGGCAGCGCCTCGATGGGAAAACAcccgcg
ggagggaaaggagcaagCAAAGAGGGGGATAGCTTGGGCACATCAGGCAC
CTCGAGCTTGAGCTGCTCCCAGGGGGACGGGGCAAGAGGCGCCGACACGG
ACCAGCCTCCCCAAATTCTGGGTCGGACGATCAGCGGACGGGCACCATCG
ACCCTGGGGCGCgggctttcctccacctctcacCCTCTTGGCGGGGAGAG
TGTGGGCTCGAGCCTGTCGGattccatcacctccccggGCTCCGTGTCCA
CgtcggcttcctccgcgacgGCCGCTGGGGCCCACAAGAAACCCGCACTG
ACCAAATACAGCAGTAAAAAAGGCTTTCAATCGTTCGTGGGTGAAGGGAA
TAAATTATCGTAG back to topCoding sequence (CDS) from alignment at KK037247.1:712832..713894+ >rna8156 ID=rna8156|Name=rna8156|organism=Nannochloropsis gaditana|type=CDS|length=1674bp|location=Sequence derived from alignment at KK037247.1:712832..713894+ (Nannochloropsis gaditana)
ATGGACCGCGTCATCTCGGAAATGCGCATCGTGGCACTGtgtttggagga
gggggtgggacgTCAGGCGGCTCTCGCGTCTTCTCCTGGGCCCTTGTCTT
TAGGGGAAGCGCAGTCCCGGTGGTGTGGTCTTTCAAGCATTATTTATCGC
CTCACGGTGTCCTTGTTTGGGCCCCTGGTTGTTCTCCTGgtCCTTGACGT
GCAACCAAGTGAAGCCGCCTGTATCATCGAGACGGATTGCAACGTGGATT
TCGAGGCCCCTGTGGGTTACGTGgagccagggcgggaaggagggagggag
ggagggaaggctgggggcggggcaagCGCGACGAACGGGGGAGTGATTAC
TGCGCGGCCCCTGAGTGCGAAAGGTGGGTACACGGCAGACCACGAAGCCG
CGGCCGCTGCGGCCGCAAAACGACAGTCGTCTTTCCTGGGCTCGGGGCAG
CGCCTCGATGGGAAAACAcccgcgggagggaaaggagcaagCAAAGAGGG
GGATAGCTTGGGCACATCAGGCACCTCGAGCTTGAGCTGCTCCCAGGGGG
ACGGGGCAAGAGGCGCCGACACGGACCAGCCTCCCCAAATTCTGGGTCGG
ACGATCAGCGGACGGGCACCATCGACCCTGGGGCGCgggctttcctccac
ctctcacCCTCTTGGCGGGGAGAGTGTGGGCTCGAGCCTGTCGGattcca
tcacctccccggGCTCCGTGTCCACgtcggcttcctccgcgacgGCCGCT
GGGGCCCACAAGAAACCCGCACTGACCAAATACAGCAGTAAAAAAGGCTT
TCAATCGTTCGTGGGTGAAGGGAATAAATTATCGTAGATGGACCGCGTCA
TCTCGGAAATGCGCATCGTGGCACTGtgtttggaggagggggtgggacgT
CAGGCGGCTCTCGCGTCTTCTCCTGGGCCCTTGTCTTTAGGGGAAGCGCA
GTCCCGGTGGTGTGGTCTTTCAAGCATTATTTATCGCCTCACGGTGTCCT
TGTTTGGGCCCCTGGTTGTTCTCCTGgtCCTTGACGTGCAACCAAGTGAA
GCCGCCTGTATCATCGAGACGGATTGCAACGTGGATTTCGAGGCCCCTGT
GGGTTACGTGgagccagggcgggaaggagggagggagggagggaaggctg
ggggcggggcaagCGCGACGAACGGGGGAGTGATTACTGCGCGGCCCCTG
AGTGCGAAAGGTGGGTACACGGCAGACCACGAAGCCGCGGCCGCTGCGGC
CGCAAAACGACAGTCGTCTTTCCTGGGCTCGGGGCAGCGCCTCGATGGGA
AAACAcccgcgggagggaaaggagcaagCAAAGAGGGGGATAGCTTGGGC
ACATCAGGCACCTCGAGCTTGAGCTGCTCCCAGGGGGACGGGGCAAGAGG
CGCCGACACGGACCAGCCTCCCCAAATTCTGGGTCGGACGATCAGCGGAC
GGGCACCATCGACCCTGGGGCGCgggctttcctccacctctcacCCTCTT
GGCGGGGAGAGTGTGGGCTCGAGCCTGTCGGattccatcacctccccggG
CTCCGTGTCCACgtcggcttcctccgcgacgGCCGCTGGGGCCCACAAGA
AACCCGCACTGACCAAATACAGCAGTAAAAAAGGCTTTCAATCGTTCGTG
GGTGAAGGGAATAAATTATCGTAG back to top
|