EWM22540.1, cds8132 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22540.1 vs. NCBI_GenBank
Match: gi|585103071|gb|EWM22540.1| (hypothetical protein Naga_100859g2 [Nannochloropsis gaditana]) HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query: 1 MDRVISEMRIVALCLEEGVGRQAALASSPGPLSLGEAQSRWCGLSSIIYRLTVSLFGPLVVLLVLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGRTISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAAGAHKKPALTKYSSKKGFQSFVGEGNKLS 278
MDRVISEMRIVALCLEEGVGRQAALASSPGPLSLGEAQSRWCGLSSIIYRLTVSLFGPLVVLLVLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGRTISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAAGAHKKPALTKYSSKKGFQSFVGEGNKLS
Sbjct: 1 MDRVISEMRIVALCLEEGVGRQAALASSPGPLSLGEAQSRWCGLSSIIYRLTVSLFGPLVVLLVLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGRTISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAAGAHKKPALTKYSSKKGFQSFVGEGNKLS 278
BLAST of EWM22540.1 vs. NCBI_GenBank
Match: gi|553190968|ref|XP_005855303.1| (thermostable carboxypeptidase, partial [Nannochloropsis gaditana CCMP526] >gi|422293759|gb|EKU21059.1| thermostable carboxypeptidase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 387.111 bits (993), Expect = 8.017e-130 Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 0
Query: 58 PLVVLL---VLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGRTISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAAGAHKKPALTKYS 262
PL++ L VLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGRTISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAAGAHKKPALTKYS
Sbjct: 22 PLLLPLLPQVLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTPAGGKGASKEGDSLGTSGTSSLSCSQGDGARGADTDQPPQILGRTISGRAPSTLGRGLSSTSHPLGGESVGSSLSDSITSPGSVSTSASSATAAGAHKKPALTKYS 229
BLAST of EWM22540.1 vs. NCBI_GenBank
Match: gi|365760640|gb|EHN02346.1| (Ufd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]) HSP 1 Score: 63.5438 bits (153), Expect = 6.400e-8 Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0
Query: 51 LTVSLFGPLVVLLVLDVQPS---EAACIIETDCNVDFEAPVGYVEPGREGGREGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAK-RQSSFLGSGQRLDGKTPAGGKGASK 165
+ +S G + +L+V+P ++ C+IETD DF APVGYVEP + + G +++ G V+ L T + A A + K +QS FLG GQ + GK P G A +
Sbjct: 160 IEISYNGKTFKIKILEVKPESSLKSICVIETDLVTDFAAPVGYVEPDYKALKAQQDKGKKGTSSRGQVLDPSVLGQGSMSTRINYAGVANSIKNKQSKFLGEGQNISGKAPKKGPEAKQ 278
BLAST of EWM22540.1 vs. NCBI_GenBank
Match: gi|401625649|gb|EJS43647.1| (ufd1p [Saccharomyces arboricola H-6]) HSP 1 Score: 62.003 bits (149), Expect = 1.899e-7 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0
Query: 51 LTVSLFGPLVVLLVLDVQP---SEAACIIETDCNVDFEAPVGYVEPGREGG-----REGGKAGGGASATNGGVITARPLSAKGGYTADHEAAAAAAAKRQSSFLGSGQRLDGKTP 157
+ +S G + +L+V+P S++ C+IETD DF APVGYVEP + +E A G + V+ +S + YT A + +QS+F+G GQ + GK P
Sbjct: 160 IEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAAPVGYVEPDYKAAKAQQDKEKKGASGKGQVLDPSVLEQGSMSTRIDYT----GTANSIKSKQSNFIGEGQNISGKAP 270
BLAST of EWM22540.1 vs. NCBI_GenBank
Match: gi|1210522506|dbj|GAX18519.1| (ubiquitin fusion degradation protein 1 [Fistulifera solaris]) HSP 1 Score: 60.8474 bits (146), Expect = 4.953e-7 Identity = 41/124 (33.06%), Postives = 54/124 (43.55%), Query Frame = 0
Query: 62 LLVLDVQPSEAACIIETDCNVDFEAPVGYVEPGREGGREGG--------------KAGGGASATNGGVI---------TARPLSAKGGYTADHEAAAAAAAKRQSSFLGS----GQRLDGKTPA 158
L + VQP++AACIIETDC VDF+AP+GYVEP R + G NG ++ T PL+ + G T + AA + +RLDGK PA
Sbjct: 162 LALQQVQPADAACIIETDCQVDFDAPIGYVEPERTEASNYKSVNNNNNNNVEAPEEKATGIRIVNGQIVRPESNNPKATEIPLAERLGATGVQKNAAIPEEAPSVDYWALQSEGARRLDGKAPA 285 The following BLAST results are available for this feature:
BLAST of EWM22540.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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