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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102891g1.6627.mrna |
| Orig protein id | gnl|cribi|Naga_102891g1.6627 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:708315..708714 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8154 ID=rna8154|Name=rna8154|organism=Nannochloropsis gaditana|type=mRNA|length=1227bp
AACGATGGGAAACTAGTGCGAAGAGCACCTCTTGTTCAGGAACTTTTTCA
AACCGGTTACAGGTGGCTATCGTTTTTTTTCCTGCTTTCTATACGCACCA
GCACGGGGGGTTGGCTTGAGCAGGTTGTCCGAGTGGGAGGGGACTTTCAC
TGGACGTTATTTAAGACGCACACTTTCCTCATTCGTCTGGTTCTCATGTG
TCCATTTATTGTACAGTCTTTCAGGTGCTGGCTGGTCTTGGGACTGGGGA
CATCGCCTGGTGTTTGGCCCTAAAAGACAGCCGTATACCCCTCCTTACCC
TAGAAGCCGCTCGTGCACCCGGCCATCCCCCCCTGCACTTATTTTAGTGC
TCCTTCTCTCTTGGACCACCCATTGCTTACAAGCAGCTTACTGAATCTTA
CACCATGCCGTACGCCTCGCTTCGGAACGCGATTCCACGCAAAACCAACA
AGGAACGGAGCCAGCCTGCCGCCCGCAAGAAATTTGGCCTTTTGGAGAAG
CACAAGGACTACGTCCAGCGCGCGAATGACTACAAAAGGAAGACCAAAGC
CTTGGCTTCGCTTCGGGAGAAGGCGGCGTTCCGAAACCCCGACGAATTTT
ATTTCGCCATGACCAAGGGGCAAACGAAAGAGGGTGTCCATCGTGTCCGA
CCCGCCGAGGCCTCCCTCCCCCACGACCACATCGCGCTGTTGAAGACCCA
GGACATGCGCTACGTGAACATGAAGCGAGCACTGGACGTGAAGAAAGCGG
AGAAGCTCCAAGCCGGCCTGCATTTTCTCACCGAGGAGGCGGCCAACAAG
CACACTGTCTTCGTGGACACGGAGGTGCCTCCCTCCCTTCCTCCCTCCCT
TCTTCCTTCCTCCCTTCCGTTCCTCCCACTTGCTCTACCTCCCACCCGGC
TTCTTCTTTCTTTTCCCGCTTTGCAAACGACATACATTCATTTGGTGACT
GATTCATTTTATCGTCATCCCACTTCTCGGTGTTTTCATGTCTCCTTCCT
CCTTTCTCGAAGGCCGCCACGACCATCGCTTCCCCCCCCCCGAATGCTAG
CATTTCCTTCGCCCCCGGCCATTGCATCATAGGATAATTACACACACATA
CACACACACACACATAGGCGGAGGCAGAGACCTTTGACCCCGCCAAGCAC
TTCGGGACCGACCCCGCGCTCGTCACGAGGGCCTTCAACAGACCGAAATT
GGAGACGTTGGAGGTAGGGGGGAGGGA back to topprotein sequence of rna8154 >rna8154-protein ID=rna8154-protein|Name=rna8154|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MHPSIPFLSPCLCPPQTPGAVLGVANVGELKKVRKARKLAYTELGERLKR
SVSFKEVYLWRLRFLHC back to topmRNA from alignment at KK037247.1:708315..708714+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8154 ID=rna8154|Name=rna8154|organism=Nannochloropsis gaditana|type=mRNA|length=400bp|location=Sequence derived from alignment at KK037247.1:708315..708714+ (Nannochloropsis gaditana)
ATGCACCCAtccattcctttcctttccccttgtctttgtcctcctcagAC
GCCGGGAGCCGTCCTGGGCGTGGCGAACGTTGGGGAACTGAAAAAAGTCC
GAAAAGCCCGAAAACTAGCCTACACCGAGCTGGGGGAACGTTTGAAACGA
AGCGTTTCCTTCAAGGAGGTGTTGGAACACATGCAGGTGGAGAAAAATGT
GATGGTGAGGCTTCAAAGTCCCGTGGGAGCCCGCTGTTCCCggaggcctc
cctcctccccggcaccACCCGGGCCTGTCCGCGTCGTCTTTATCGGGGGG
GCGTGTGGAACtcttgccttccttttcgtattcttctctctccttacgAC
CATGGTCTGCCCGCAGATACTTGTGGCGCTTGCGTTTCCTTCACTGTTAG
back to topCoding sequence (CDS) from alignment at KK037247.1:708315..708714+ >rna8154 ID=rna8154|Name=rna8154|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at KK037247.1:708315..708714+ (Nannochloropsis gaditana)
ATGCACCCAtccattcctttcctttccccttgtctttgtcctcctcagAC
GCCGGGAGCCGTCCTGGGCGTGGCGAACGTTGGGGAACTGAAAAAAGTCC
GAAAAGCCCGAAAACTAGCCTACACCGAGCTGGGGGAACGTTTGAAACGA
AGCGTTTCCTTCAAGGAGGTATACTTGTGGCGCTTGCGTTTCCTTCACTG
TTAGATGCACCCAtccattcctttcctttccccttgtctttgtcctcctc
agACGCCGGGAGCCGTCCTGGGCGTGGCGAACGTTGGGGAACTGAAAAAA
GTCCGAAAAGCCCGAAAACTAGCCTACACCGAGCTGGGGGAACGTTTGAA
ACGAAGCGTTTCCTTCAAGGAGGTATACTTGTGGCGCTTGCGTTTCCTTC
ACTGTTAG back to top
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