EWM22543.1, cds8130 (CDS) Nannochloropsis gaditana

Overview
NameEWM22543.1
Unique Namecds8130
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:708315..708484 +
Alignment locationKK037247.1:708681..708714 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22543.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102891g1.6627.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:708315..708484 +
KK037247.1supercontigKK037247.1:708681..708714 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22543.1 vs. NCBI_GenBank
Match: gi|585103078|gb|EWM22543.1| (hypothetical protein Naga_102891g1 [Nannochloropsis gaditana])

HSP 1 Score: 138.272 bits (347), Expect = 1.313e-41
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MHPSIPFLSPCLCPPQTPGAVLGVANVGELKKVRKARKLAYTELGERLKRSVSFKEVYLWRLRFLHC 67
            MHPSIPFLSPCLCPPQTPGAVLGVANVGELKKVRKARKLAYTELGERLKRSVSFKEVYLWRLRFLHC
Sbjct:    1 MHPSIPFLSPCLCPPQTPGAVLGVANVGELKKVRKARKLAYTELGERLKRSVSFKEVYLWRLRFLHC 67
The following BLAST results are available for this feature:
BLAST of EWM22543.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103078|gb|EWM22543.1|1.313e-41100.00hypothetical protein Naga_102891g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8154rna8154Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications