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Properties
| Property Name | Value |
|---|
| Product | peptidase s1 and s6 chymotrypsin hap |
| Orig transcript id | gnl|cribi|Naga_100372g3.5025.mrna |
| Orig protein id | gnl|cribi|Naga_100372g3.5025 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:670478..672247 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8142 ID=rna8142|Name=rna8142|organism=Nannochloropsis gaditana|type=mRNA|length=1598bp
TTGCTGCTCGGTTGATGGGAAGCCAGGGGTTTGGACAGGGCGATTTTGTT
CCAAGAACTGTTTGCCGTACGGGGTAACGGCACGATGACGCCATCTTAAG
CCTTATGCCATACGTCTACAAGACTCGTATGTCCAGAAAGGCTCCCCGCT
CGGAGGCTTTAGACCCGGCCACGGTAGTATTTGGTGCATGTAAATCGTGT
CAAGATGTTTTATTCAATATGTTTGTCGTGGCTCGCTCCTTTTCTTGGGT
TTGTATCTGACTACAAGTTTCGCAAGTGGTGGCTTTGTTTACGTGTTGCT
TTCTGCATGTCTCCTCAACTTACCCCCCGCCTCTTCCATTTTCCTCCAGT
TCCGTTCTCTTTCCTCACTCACACATCGACGAAGGTCAAATGACGGACCC
CTCTGTCAACAATCGGGGTCAAACACCACCTCCTCTCTCGTTTGCCCTAC
ACTCTCCCCATCGACCAAACAACGGAGCTAGCCATCACCAGACCTCCGCC
CGTCATGATGACATCTTCCACCACATCACCGGCCAAGAGCTCCCTGCACC
TTCTAGTAGCACATTGAGGCTGAACAAGCCCCTTGTCAGACGGAAACACC
GGGAGATTCTGGTTTTCATCTTTCCCATCGTGTTCGCCCTCATTCCGGTA
GTCTTCATCATCTTCTCCTCCCCGCATGCGGGATCCCGGATCTCCTTCGA
CCTCACCACCCATGTGCCTCCAATTATTTGCTTTATCGTCATCCCCATGT
ACCACATATATATGTTCGCGTATCGTGGAAAAGGGAAGGCCTCGTTGCCC
TTCTTCGGCAATATTCGGGTGCATTGGGTTTTGGAAAATTGCAACACGGG
GGAGTTGGCTCCCCTGAACACCTTGCGCGATTTCGGAAAGGTTTCTCTCT
TCCTCGCCGCGAATGCCACCCTGGCGGCGTCCATTATTGTCACCTTCGCA
TATCAGATCTTTAACCGTTGCCCTAACCAGTCCCTCTCGGGCTGTGGACC
GGACAACTTGTACCTGGTCGCACAATTGGTGGTCCTCATCGTCAACTTCT
TCTTCGTAATCATCCACATGCTCATGGCCACCCGCTTTATCATGAACTGT
GAATTCATGCTGAACGTGAAGGAAGTGGGTGGACGGCCCTTGAGGCCGGA
GGCTGTCGCCTCCGTCCTCTCTCGGGCCAACCTGTACTACGGCATTGGTC
TCCGGCAGACTTACTACTCGATTCCCCTCTTCTCCTGGCTGCTGGGGCCG
TGGACCCTGGTGGGCATGACGGTCCTCTACCTGGGCTTCGCCTACTACGT
GGAGAGCACCAATGCCTTTCTGCACGCGGCCAACCATGTGATCGGAGAGA
CTGAAGGAGCCTCTGTCTTCAACAACGACGGCGCGCCGGAGGGATTGAAG
GAGGGAGGGAAGGAAGGAGGGAAGGAAGGAGGGAGGGAGGGAGGGAAGGA
AGGAGGGAAGGAAGGCATCCCACGGTGTACGTCCTTGGCTGAACAACTGT
ACTCTGACTTTCCCCCTCCCCCTCCGGGAGACTACGGGCGGGTGGCGAGA
GGCGCGGAGGAGAATGACGGTCGAGAAGGCGGGGGCGGGGCCGTGTAA back to topprotein sequence of rna8142 >rna8142-protein ID=rna8142-protein|Name=rna8142|organism=Nannochloropsis gaditana|type=polypeptide|length=408bp
MPDKGPCKLSFGVSVKFSPFFDNSNSTHASSSAGRFIFLQDFGMGHAMHR
GRRLSTLLHLSLACSWIFIVKAVMVDNIIDHASSKNNTGGGRRLNVFGWP
DRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDE
MVASRMDGRFLLGYSGGTVLASAGLLHVWYGLDPTSDWAIARIDQPLGRT
FGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQA
RLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMPQVKVLGDFDPR
FPNFATPAEEVYPTWSWLITQPCLGNAVFPSSPSRLIVRRQRCSASFLAH
QLGRFHVTGDVMSFPADHPVLVTPVVTLPSWLISLVVVTSLVTSCPSPPI
TQSWRRLW back to topmRNA from alignment at KK037247.1:670478..672247+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8142 ID=rna8142|Name=rna8142|organism=Nannochloropsis gaditana|type=mRNA|length=1770bp|location=Sequence derived from alignment at KK037247.1:670478..672247+ (Nannochloropsis gaditana)
ATGCCGGACAAAGGACCGTGCAAGCTTTCCTTTGGTGTTTCTGTCAAATT
TTCTCCATTCTTTGACAATTCGAATTCCACACACGCCTCGTCGTCGGCGG
GCAGATTTATTTTCCTGCAGGATTTCGGGATGGGCCACGCCATGCACCGA
GGAAGACGCCTCAGCACTCTCCTTCACCTTAGTCTCGCCTGCAGCTGGAT
ATTCATCGTGAAGGCAGTCATGGTAGATAATATCATCGATCACGCTTCCT
CGAAAAATAACACGGGTGGCGGGCGTCGTTTAAATGTGTTTGGATGGCCT
GACCGCAGACATATCTCCGACCGGGACACTTGGCCTGGGCGTGTTGTGGG
CAAGTTGGAGTTCCCAGACAGGCAATACTGCACTGCCACATTAGTAGGCC
CCTCTCTCATTCTTACGGCACGGCACTGGTAGGATGTAGTTTTTGATTCT
GCGTGCATCAGACACCCTGGTGGGGAGAGTGAGCGTTGCCCCGGGTATTT
GTTCCCTGCTAACAGCGGTTCTCACCCTCGCCCACAGTTTCGCGAATCTT
CTGGACGAAATGGTGGCCTCCCGGATGGATGGACGCTTCCTCCTGGGCTA
TTCAGGGGGTACCGTCTTGGCCTccgcaggcctcctccatgtctgGTATG
GTCTCGATCCCACGTCGGACTGGGCGATCGCGCGCATCGACCAGCCCCTG
GGAAGGACCTTCGGGCACATGGTGCCGACGTCCGCCGCGGTCACAGACAT
GCTCCCATTGGAAAAGCAGTTCAGGtgctgtccttctccccccgcgTTTG
GCATAGTTTTGGGTTACCGGTATCGACACAAGTCGTGGCGGGCGCGTCCT
CAATGCtcacactccttccctccctccctccctccctccctccctccctc
tctccctccctccctccgtctccccgaacctttcccttcctcgcagCATG
GTCGCTTTCTCCCGGGACAAATTCGAATACCGGGCCGGGACGGACCCGGT
GTGCTCCCTCTTGTCTTTCCGAAAACAGGCTCGGCTGATGGTCACGACCT
GTTCGGGGGAGGCTGGCGCCTCGGGCGCGGCCATCGCGGACGACAAGGGC
GTGGTAGGTACGGGGGAACCGGTATTGGACCGTTAGAGACCGTTAAAGAC
CGTtgtgcgtctcctcctctccttgtcccagTGTCCCAGACGGTATGGGG
GCTGCCCCTGATGgccctttcgcgccattttcctcctcaagctttccctc
ccctccttcgctcctcccttttccccgtcccccttgcCAGATCTACGGTG
TGTTTGTGGCGGCCATTGAACATGACGACATGCCGCAGGTGAAGGTGCTG
GGGGACTTCGACCCCCGCTTCCCTAACttcgccacgcccgccgaAGAGGT
CTACCCTACCTGGTCCTGGCTCATCACCCAGCCCTGGTGACGCGGTACTT
CCTTCCTGGCTCATCACCCAGCCTTGGTGACGCGGTATTTCCTTCCTGGC
TCATCACCCAGCCTTGGTAACGCGgtatttccttcctctccttcccgtct
caTCGTGCGGCGGCAACGATGCTCGGCTTCCTTCCTGGCTCATCAGCTTG
GTCGTTTTCACGTCACTGGTGACGTCATGTCCTTCCCCGCCGATCACCCA
GTCCTGGTGACACCTGTGGTGACGCTTCCTTCCTGGCTCATCAGCTTGGT
CGTTGTCACGTCACTGGTGACGTCatgtccttccccgcccatcACCCAGT
CCTGGCGACGCCTGTGGTGA back to topCoding sequence (CDS) from alignment at KK037247.1:670478..672247+ >rna8142 ID=rna8142|Name=rna8142|organism=Nannochloropsis gaditana|type=CDS|length=6135bp|location=Sequence derived from alignment at KK037247.1:670478..672247+ (Nannochloropsis gaditana)
ATGCCGGACAAAGGACCGTGCAAGCTTTCCTTTGGTGTTTCTGTCAAATT
TTCTCCATTCTTTGACAATTCGAATTCCACACACGCCTCGTCGTCGGCGG
GCAGATTTATTTTCCTGCAGGATTTCGGGATGGGCCACGCCATGCACCGA
GGAAGACGCCTCAGCACTCTCCTTCACCTTAGTCTCGCCTGCAGCTGGAT
ATTCATCGTGAAGGCAGTCATGGTAGATAATATCATCGATCACGCTTCCT
CGAAAAATAACACGGGTGGCGGGCGTCGTTTAAATGTGTTTGGATGGCCT
GACCGCAGACATATCTCCGACCGGGACACTTGGCCTGGGCGTGTTGTGGG
CAAGTTGGAGTTCCCAGACAGGCAATACTGCACTGCCACATTAGTAGGCC
CCTCTCTCATTCTTACGGCACGGCACTGTTTCGCGAATCTTCTGGACGAA
ATGGTGGCCTCCCGGATGGATGGACGCTTCCTCCTGGGCTATTCAGGGGG
TACCGTCTTGGCCTccgcaggcctcctccatgtctgGTATGGTCTCGATC
CCACGTCGGACTGGGCGATCGCGCGCATCGACCAGCCCCTGGGAAGGACC
TTCGGGCACATGGTGCCGACGTCCGCCGCGGTCACAGACATGCTCCCATT
GGAAAAGCAGTTCAGCATGGTCGCTTTCTCCCGGGACAAATTCGAATACC
GGGCCGGGACGGACCCGGTGTGCTCCCTCTTGTCTTTCCGAAAACAGGCT
CGGCTGATGGTCACGACCTGTTCGGGGGAGGCTGGCGCCTCGGGCGCGGC
CATCGCGGACGACAAGGGCGTGATCTACGGTGTGTTTGTGGCGGCCATTG
AACATGACGACATGCCGCAGGTGAAGGTGCTGGGGGACTTCGACCCCCGC
TTCCCTAACttcgccacgcccgccgaAGAGGTCTACCCTACCTGGTCCTG
GCTCATCACCCAGCCCTGCCTTGGTAACGCGgtatttccttcctctcctt
cccgtctcaTCGTGCGGCGGCAACGATGCTCGGCTTCCTTCCTGGCTCAT
CAGCTTGGTCGTTTTCACGTCACTGGTGACGTCATGTCCTTCCCCGCCGA
TCACCCAGTCCTGGTGACACCTGTGGTGACGCTTCCTTCCTGGCTCATCA
GCTTGGTCGTTGTCACGTCACTGGTGACGTCatgtccttccccgcccatc
ACCCAGTCCTGGCGACGCCTGTGGTGAATGCCGGACAAAGGACCGTGCAA
GCTTTCCTTTGGTGTTTCTGTCAAATTTTCTCCATTCTTTGACAATTCGA
ATTCCACACACGCCTCGTCGTCGGCGGGCAGATTTATTTTCCTGCAGGAT
TTCGGGATGGGCCACGCCATGCACCGAGGAAGACGCCTCAGCACTCTCCT
TCACCTTAGTCTCGCCTGCAGCTGGATATTCATCGTGAAGGCAGTCATGG
TAGATAATATCATCGATCACGCTTCCTCGAAAAATAACACGGGTGGCGGG
CGTCGTTTAAATGTGTTTGGATGGCCTGACCGCAGACATATCTCCGACCG
GGACACTTGGCCTGGGCGTGTTGTGGGCAAGTTGGAGTTCCCAGACAGGC
AATACTGCACTGCCACATTAGTAGGCCCCTCTCTCATTCTTACGGCACGG
CACTGTTTCGCGAATCTTCTGGACGAAATGGTGGCCTCCCGGATGGATGG
ACGCTTCCTCCTGGGCTATTCAGGGGGTACCGTCTTGGCCTccgcaggcc
tcctccatgtctgGTATGGTCTCGATCCCACGTCGGACTGGGCGATCGCG
CGCATCGACCAGCCCCTGGGAAGGACCTTCGGGCACATGGTGCCGACGTC
CGCCGCGGTCACAGACATGCTCCCATTGGAAAAGCAGTTCAGCATGGTCG
CTTTCTCCCGGGACAAATTCGAATACCGGGCCGGGACGGACCCGGTGTGC
TCCCTCTTGTCTTTCCGAAAACAGGCTCGGCTGATGGTCACGACCTGTTC
GGGGGAGGCTGGCGCCTCGGGCGCGGCCATCGCGGACGACAAGGGCGTGA
TCTACGGTGTGTTTGTGGCGGCCATTGAACATGACGACATGCCGCAGGTG
AAGGTGCTGGGGGACTTCGACCCCCGCTTCCCTAACttcgccacgcccgc
cgaAGAGGTCTACCCTACCTGGTCCTGGCTCATCACCCAGCCCTGCCTTG
GTAACGCGgtatttccttcctctccttcccgtctcaTCGTGCGGCGGCAA
CGATGCTCGGCTTCCTTCCTGGCTCATCAGCTTGGTCGTTTTCACGTCAC
TGGTGACGTCATGTCCTTCCCCGCCGATCACCCAGTCCTGGTGACACCTG
TGGTGACGCTTCCTTCCTGGCTCATCAGCTTGGTCGTTGTCACGTCACTG
GTGACGTCatgtccttccccgcccatcACCCAGTCCTGGCGACGCCTGTG
GTGAATGCCGGACAAAGGACCGTGCAAGCTTTCCTTTGGTGTTTCTGTCA
AATTTTCTCCATTCTTTGACAATTCGAATTCCACACACGCCTCGTCGTCG
GCGGGCAGATTTATTTTCCTGCAGGATTTCGGGATGGGCCACGCCATGCA
CCGAGGAAGACGCCTCAGCACTCTCCTTCACCTTAGTCTCGCCTGCAGCT
GGATATTCATCGTGAAGGCAGTCATGGTAGATAATATCATCGATCACGCT
TCCTCGAAAAATAACACGGGTGGCGGGCGTCGTTTAAATGTGTTTGGATG
GCCTGACCGCAGACATATCTCCGACCGGGACACTTGGCCTGGGCGTGTTG
TGGGCAAGTTGGAGTTCCCAGACAGGCAATACTGCACTGCCACATTAGTA
GGCCCCTCTCTCATTCTTACGGCACGGCACTGTTTCGCGAATCTTCTGGA
CGAAATGGTGGCCTCCCGGATGGATGGACGCTTCCTCCTGGGCTATTCAG
GGGGTACCGTCTTGGCCTccgcaggcctcctccatgtctgGTATGGTCTC
GATCCCACGTCGGACTGGGCGATCGCGCGCATCGACCAGCCCCTGGGAAG
GACCTTCGGGCACATGGTGCCGACGTCCGCCGCGGTCACAGACATGCTCC
CATTGGAAAAGCAGTTCAGCATGGTCGCTTTCTCCCGGGACAAATTCGAA
TACCGGGCCGGGACGGACCCGGTGTGCTCCCTCTTGTCTTTCCGAAAACA
GGCTCGGCTGATGGTCACGACCTGTTCGGGGGAGGCTGGCGCCTCGGGCG
CGGCCATCGCGGACGACAAGGGCGTGATCTACGGTGTGTTTGTGGCGGCC
ATTGAACATGACGACATGCCGCAGGTGAAGGTGCTGGGGGACTTCGACCC
CCGCTTCCCTAACttcgccacgcccgccgaAGAGGTCTACCCTACCTGGT
CCTGGCTCATCACCCAGCCCTGCCTTGGTAACGCGgtatttccttcctct
ccttcccgtctcaTCGTGCGGCGGCAACGATGCTCGGCTTCCTTCCTGGC
TCATCAGCTTGGTCGTTTTCACGTCACTGGTGACGTCATGTCCTTCCCCG
CCGATCACCCAGTCCTGGTGACACCTGTGGTGACGCTTCCTTCCTGGCTC
ATCAGCTTGGTCGTTGTCACGTCACTGGTGACGTCatgtccttccccgcc
catcACCCAGTCCTGGCGACGCCTGTGGTGAATGCCGGACAAAGGACCGT
GCAAGCTTTCCTTTGGTGTTTCTGTCAAATTTTCTCCATTCTTTGACAAT
TCGAATTCCACACACGCCTCGTCGTCGGCGGGCAGATTTATTTTCCTGCA
GGATTTCGGGATGGGCCACGCCATGCACCGAGGAAGACGCCTCAGCACTC
TCCTTCACCTTAGTCTCGCCTGCAGCTGGATATTCATCGTGAAGGCAGTC
ATGGTAGATAATATCATCGATCACGCTTCCTCGAAAAATAACACGGGTGG
CGGGCGTCGTTTAAATGTGTTTGGATGGCCTGACCGCAGACATATCTCCG
ACCGGGACACTTGGCCTGGGCGTGTTGTGGGCAAGTTGGAGTTCCCAGAC
AGGCAATACTGCACTGCCACATTAGTAGGCCCCTCTCTCATTCTTACGGC
ACGGCACTGTTTCGCGAATCTTCTGGACGAAATGGTGGCCTCCCGGATGG
ATGGACGCTTCCTCCTGGGCTATTCAGGGGGTACCGTCTTGGCCTccgca
ggcctcctccatgtctgGTATGGTCTCGATCCCACGTCGGACTGGGCGAT
CGCGCGCATCGACCAGCCCCTGGGAAGGACCTTCGGGCACATGGTGCCGA
CGTCCGCCGCGGTCACAGACATGCTCCCATTGGAAAAGCAGTTCAGCATG
GTCGCTTTCTCCCGGGACAAATTCGAATACCGGGCCGGGACGGACCCGGT
GTGCTCCCTCTTGTCTTTCCGAAAACAGGCTCGGCTGATGGTCACGACCT
GTTCGGGGGAGGCTGGCGCCTCGGGCGCGGCCATCGCGGACGACAAGGGC
GTGATCTACGGTGTGTTTGTGGCGGCCATTGAACATGACGACATGCCGCA
GGTGAAGGTGCTGGGGGACTTCGACCCCCGCTTCCCTAACttcgccacgc
ccgccgaAGAGGTCTACCCTACCTGGTCCTGGCTCATCACCCAGCCCTGC
CTTGGTAACGCGgtatttccttcctctccttcccgtctcaTCGTGCGGCG
GCAACGATGCTCGGCTTCCTTCCTGGCTCATCAGCTTGGTCGTTTTCACG
TCACTGGTGACGTCATGTCCTTCCCCGCCGATCACCCAGTCCTGGTGACA
CCTGTGGTGACGCTTCCTTCCTGGCTCATCAGCTTGGTCGTTGTCACGTC
ACTGGTGACGTCatgtccttccccgcccatcACCCAGTCCTGGCGACGCC
TGTGGTGAATGCCGGACAAAGGACCGTGCAAGCTTTCCTTTGGTGTTTCT
GTCAAATTTTCTCCATTCTTTGACAATTCGAATTCCACACACGCCTCGTC
GTCGGCGGGCAGATTTATTTTCCTGCAGGATTTCGGGATGGGCCACGCCA
TGCACCGAGGAAGACGCCTCAGCACTCTCCTTCACCTTAGTCTCGCCTGC
AGCTGGATATTCATCGTGAAGGCAGTCATGGTAGATAATATCATCGATCA
CGCTTCCTCGAAAAATAACACGGGTGGCGGGCGTCGTTTAAATGTGTTTG
GATGGCCTGACCGCAGACATATCTCCGACCGGGACACTTGGCCTGGGCGT
GTTGTGGGCAAGTTGGAGTTCCCAGACAGGCAATACTGCACTGCCACATT
AGTAGGCCCCTCTCTCATTCTTACGGCACGGCACTGTTTCGCGAATCTTC
TGGACGAAATGGTGGCCTCCCGGATGGATGGACGCTTCCTCCTGGGCTAT
TCAGGGGGTACCGTCTTGGCCTccgcaggcctcctccatgtctgGTATGG
TCTCGATCCCACGTCGGACTGGGCGATCGCGCGCATCGACCAGCCCCTGG
GAAGGACCTTCGGGCACATGGTGCCGACGTCCGCCGCGGTCACAGACATG
CTCCCATTGGAAAAGCAGTTCAGCATGGTCGCTTTCTCCCGGGACAAATT
CGAATACCGGGCCGGGACGGACCCGGTGTGCTCCCTCTTGTCTTTCCGAA
AACAGGCTCGGCTGATGGTCACGACCTGTTCGGGGGAGGCTGGCGCCTCG
GGCGCGGCCATCGCGGACGACAAGGGCGTGATCTACGGTGTGTTTGTGGC
GGCCATTGAACATGACGACATGCCGCAGGTGAAGGTGCTGGGGGACTTCG
ACCCCCGCTTCCCTAACttcgccacgcccgccgaAGAGGTCTACCCTACC
TGGTCCTGGCTCATCACCCAGCCCTGCCTTGGTAACGCGgtatttccttc
ctctccttcccgtctcaTCGTGCGGCGGCAACGATGCTCGGCTTCCTTCC
TGGCTCATCAGCTTGGTCGTTTTCACGTCACTGGTGACGTCATGTCCTTC
CCCGCCGATCACCCAGTCCTGGTGACACCTGTGGTGACGCTTCCTTCCTG
GCTCATCAGCTTGGTCGTTGTCACGTCACTGGTGACGTCatgtccttccc
cgcccatcACCCAGTCCTGGCGACGCCTGTGGTGA back to top
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