EWM22557.1, cds8118 (CDS) Nannochloropsis gaditana

Overview
NameEWM22557.1
Unique Namecds8118
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:670478..670905 +
Alignment locationKK037247.1:671015..671251 +
Alignment locationKK037247.1:671424..671580 +
Alignment locationKK037247.1:671768..671913 +
Alignment locationKK037247.1:671989..672247 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22557.1
Productpeptidase s1 and s6 chymotrypsin hap
Orig transcript idgnl|cribi|Naga_100372g3.5025.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:670478..670905 +
KK037247.1supercontigKK037247.1:671015..671251 +
KK037247.1supercontigKK037247.1:671424..671580 +
KK037247.1supercontigKK037247.1:671768..671913 +
KK037247.1supercontigKK037247.1:671989..672247 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR009003Trypsin-like_Pept_dom
IPR001254Peptidase_S1
Homology
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|585103102|gb|EWM22557.1| (peptidase s1 and s6 chymotrypsin hap [Nannochloropsis gaditana])

HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query:    1 MPDKGPCKLSFGVSVKFSPFFDNSNSTHASSSAGRFIFLQDFGMGHAMHRGRRLSTLLHLSLACSWIFIVKAVMVDNIIDHASSKNNTGGGRRLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLASAGLLHVWYGLDPTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMPQVKVLGDFDPRFPNFATPAEEVYPTWSWLITQPCLGNAVFPSSPSRLIVRRQRCSASFLAHQLGRFHVTGDVMSFPADHPVLVTPVVTLPSWLISLVVVTSLVTSCPSPPITQSWRRLW 408
            MPDKGPCKLSFGVSVKFSPFFDNSNSTHASSSAGRFIFLQDFGMGHAMHRGRRLSTLLHLSLACSWIFIVKAVMVDNIIDHASSKNNTGGGRRLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLASAGLLHVWYGLDPTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMPQVKVLGDFDPRFPNFATPAEEVYPTWSWLITQPCLGNAVFPSSPSRLIVRRQRCSASFLAHQLGRFHVTGDVMSFPADHPVLVTPVVTLPSWLISLVVVTSLVTSCPSPPITQSWRRLW
Sbjct:    1 MPDKGPCKLSFGVSVKFSPFFDNSNSTHASSSAGRFIFLQDFGMGHAMHRGRRLSTLLHLSLACSWIFIVKAVMVDNIIDHASSKNNTGGGRRLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLASAGLLHVWYGLDPTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMPQVKVLGDFDPRFPNFATPAEEVYPTWSWLITQPCLGNAVFPSSPSRLIVRRQRCSASFLAHQLGRFHVTGDVMSFPADHPVLVTPVVTLPSWLISLVVVTSLVTSCPSPPITQSWRRLW 408          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|585108905|gb|EWM26814.1| (glutamyl endopeptidase family protein [Nannochloropsis gaditana])

HSP 1 Score: 129.798 bits (325), Expect = 3.492e-30
Identity = 82/244 (33.61%), Postives = 122/244 (50.00%), Query Frame = 0
Query:   92 RRLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRM-DGRFLLGYSGGT-----VLASAGLLHVWYG-----LDPTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMP-QVKVL--GDFDPRFPNFATPAEEVYPTWSWLITQ 321
            RRLNV+   D+R   D D +P R  GKL FP   YCT  L+G   +LTA HCF +    +    +   +F + Y           AS+    +WYG     +   SDWAI  ++ PLG T G++      ++  LP+  +FS++ +S D +   AG DP CSL    +        C+  AGASG A+ D    + G+  A +    MP   K+L   D++P +PN A PA +  PT++ ++TQ
Sbjct:  162 RRLNVYA-KDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSEDGYSQTAGIDPKCSLEDAYQGVYFHNCDCA--AGASGGALLDASFNVVGINTAHV----MPSNTKLLRASDYNPTYPNIAVPAYQFMPTYAHILTQ 398          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|1084920500|gb|OGR39132.1| (hypothetical protein A2X29_10510 [Elusimicrobia bacterium GWA2_64_40] >gi|1084952451|gb|OGR67901.1| hypothetical protein A2X30_02895 [Elusimicrobia bacterium GWB2_63_16])

HSP 1 Score: 74.3294 bits (181), Expect = 3.689e-11
Identity = 65/225 (28.89%), Postives = 107/225 (47.56%), Query Frame = 0
Query:   95 NVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLL--GYSGGTVLASAGLLHVWYGLDPT---SDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGT-DPVCSLLSFRKQARLMVTTCSGEAGASGAA--IADDKGVIYGVFVAAIEH--DDMPQVKVLGDFDPRFPNFATPAE 309
            NVF    R  ++    +P   +G+L+ P+  +CTA LV   LILT  HC   +LD+   + M G F+     + G    S+G+   W+G  PT    DWA+ R+ +PLG   G M     A+ D  P   Q   V++S D +   + + +  C+++S        +  CS   G+SG+   I +DK + Y + + A E+   D    ++  +F  +  N A  A+
Sbjct:   88 NVFTGNKRGKVTSTQ-YPWNTIGRLDLPNGGHCTAALVSRDLILTNAHC---ILDKSTNTLMAGAFVFRPNLTNGASAYSSGVTLAWWGSYPTDKSGDWALMRLAKPLGDNLGWM--GVKALPD--PRIAQLYAVSYSEDFYSGSSASFETGCTIVSGPTSFGQWLHNCSNSRGSSGSPMFIFEDK-LPYVIAIHASEYRASDSSDSEIGIEFSFKKANLAVAAD 303          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|492955938|ref|WP_006064023.1| (glutamyl endopeptidase family protein [Corynebacterium durum] >gi|429146499|gb|EKX89552.1| glutamyl endopeptidase family protein [Corynebacterium durum F0235])

HSP 1 Score: 71.633 bits (174), Expect = 2.380e-10
Identity = 55/195 (28.21%), Postives = 87/195 (44.62%), Query Frame = 0
Query:   95 NVFGWPDRRHISDRDTWPGRVVGKLEFP----DRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTV-LASAGLLHVWYGLDPTS------DWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGV 278
            +V G  DR  + D   +P R VG L F      R  CT +L+GP  ++T+ HC ++   +M        F  G +G +    +A +  VW   +  S      DWA+A++DQPLG   G     SA    +    K  +++ +  DK      T  V     F ++  L         G SG+++ D++G IYG+
Sbjct:   80 DVIGTDDRYEVKDATQYPYRWVGTLTFTLESGKRVSCTGSLIGPDSVVTSGHCLSDKFTDMT-------FSPGQNGDSKPFGTANVTQVWMDENKRSEQDIERDWAVAKLDQPLGNKAGWFGMKSADNESLYG--KSTTIIGYPVDK---EKNTMWVGHGRIFSEERGLFYHDTDTYYGNSGSSVLDERGTIYGI 262          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|917002968|ref|WP_051609680.1| (S1 family peptidase [Terasakiella pusilla])

HSP 1 Score: 70.8626 bits (172), Expect = 3.959e-10
Identity = 51/190 (26.84%), Postives = 82/190 (43.16%), Query Frame = 0
Query:   93 RLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVL--ASAGLLHVWYGLDPTS---------DWAIARIDQPLGRTFGHM--VPTSAAVTDMLPLEK-QFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAI 268
            +L+     D R + +   +P   +G++      +CT TL+GP L+LTA HC  N   ++        FL GY  G+ +  A A   H+  G  PT+         DWA   +D+ + +  G +   P +  +   L  +K  F    +S+DK  +    +  C L S+    RL    C    G SG+ I
Sbjct:   24 KLDGIKGEDDRILIETYKYPWSAIGRINKESGGFCTGTLIGPKLVLTAAHCLWNKKRKVWVKAHTIHFLAGYRRGSFIDHAKAVNYHIAPGYSPTTAKTYSSVSKDWAFLELDKDMSQRVGTLAVAPINKNIYTTLKAQKTNFIQAGYSQDK-AHILSVNQQCELTSYNTLLRLATHVCDAVPGDSGSPI 212          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|1105268943|ref|WP_071837131.1| (hypothetical protein [Leptolyngbya sp. NIES-3755] >gi|965632871|dbj|BAU12443.1| glutamyl endopeptidase [Leptolyngbya sp. NIES-3755])

HSP 1 Score: 71.2478 bits (173), Expect = 3.979e-10
Identity = 66/248 (26.61%), Postives = 99/248 (39.92%), Query Frame = 0
Query:   72 AVMVDNIIDHASSKNNTGGGRRLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQ---YCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLASAGLLHVWYGLDP-----TSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYR------AGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMPQVKVLGDFDPRFPNFA 305
            +V  +  I     K+N       NVFG  D+R       +P   +G++   D+     CT  L+   L++T  HC   +  E         F   ++ G     A ++ V  G D        DWAI ++DQPLG  +G M   S  V+ +  L KQF++  +S D F  +      AG    CS+  F     L    C    GASG AI         V VA  + ++  + +    F     N+A
Sbjct:   51 SVRGEGYIPKTLQKSNQPSEASRNVFG-RDQRVPMTSSAYPWSAIGRIIEIDQDGGSMCTGNLIAKDLVVTNAHC---VFGENGEPAQKISFEPNFANGASQDRANVVSVVVGTDKPEQNRAKDWAILKLDQPLGEKYGWMEWASEPVSTLTQLPKQFNLAGYSGD-FPTKKTGGSTAGVHVGCSIRGFEPALNLATHDCDMTRGASGGAIFTISDTGMAVIVALNDAENTSEGEYPAQFGQSTANYA 293          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|1177843034|ref|WP_082869228.1| (hypothetical protein [Oleiphilus sp. HI0125])

HSP 1 Score: 70.0922 bits (170), Expect = 4.564e-10
Identity = 67/254 (26.38%), Postives = 105/254 (41.34%), Query Frame = 0
Query:   78 IIDHASSKNNTGGGRRLNVF-----GWP--DRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLASAGLL-------HVWYG-LDPTS---DWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSL-LSFRKQARLMVTTCSGEAGASGAAIA---DDKGVIYGVFVAAIEHDDMPQVKVLGDFDPRFPNFATPAE 309
            + ++  ++N  G   + ++F      WP      + D    P  V+GKL    +Q CTATLV P  +LTA HC  +       S     FL G + G ++A +  +       H+  G  D  +   DWA+ R+  P+G   GHM P      D     ++F +  + +     R   +  C L L  +K   + +  C+ E G SGAA+     +K  + GV  AA             D   RF  F  P++
Sbjct:    1 MFNYTPAENYVGDTVKTSIFLFFILVWPCLASSAVVDATQPPWNVIGKLRVEAKQSCTATLVSPDTVLTAAHCIYDYKTRSYFSPNKIHFLAGLNAGALVAQSEAMSYTVAAKHLPEGTFDDQALLKDWALVRLRYPVGCMLGHMKP-----GDHTNSFQRFMIAGYPKSD-PSRIHAEQSCKLALPPKKNQMIRIKDCAVEHGDSGAALVGLNGNKATLLGVLSAATN-----------DSKGRFRAFVVPSD 237          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|746972312|gb|KIF28974.1| (peptidase S1 and S6 chymotrypsin/Hap [Hassallia byssoidea VB512170])

HSP 1 Score: 70.8626 bits (172), Expect = 4.833e-10
Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = 0
Query:   83 SSKNNTGGGRRLNVFGWPDRRHISDR-----DTWP----GRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLAS---AGLLHVWYGLD-------PTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRD----KFE--------YRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAI 268
            S+K N GG R     G PD+  I DR       +P    GRV G     +  +CT  L+   +ILT  HC  +     ++ R+  +FL     G V  +   A ++ V YG +         +DWA+ +I++PLGR +G++   S A + ++  +K++  V +SRD    K++        + A     CS+L  +++A  ++  C    G+SG  I
Sbjct:   67 SAKPNEGGTR-----GIPDQ--IDDRIPMLSRKYPWSTIGRVQGTTADANSYHCTGALIAEDIILTNAHCVIDPETGKLSQRI--QFLPNVIDGQVQDTRDVAEVVDVVYGTNFKDGAKLDANDWAVMKINKPLGRKYGYLGVKSVASSTLIRNQKKYFFVGYSRDFPSSKYQQFFTAGAGWTASFQAGCSIL--KEEANFLLHDCDTAGGSSGGPI 272          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|1024703123|gb|KZZ58020.1| (hypothetical protein A3762_08845 [Oleiphilus sp. HI0125])

HSP 1 Score: 69.3218 bits (168), Expect = 8.112e-10
Identity = 62/220 (28.18%), Postives = 92/220 (41.82%), Query Frame = 0
Query:  105 ISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDGRFLLGYSGGTVLASAGLL-------HVWYG-LDPTS---DWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSL-LSFRKQARLMVTTCSGEAGASGAAIA---DDKGVIYGVFVAAIEHDDMPQVKVLGDFDPRFPNFATPAE 309
            + D    P  V+GKL    +Q CTATLV P  +LTA HC  +       S     FL G + G ++A +  +       H+  G  D  +   DWA+ R+  P+G   GHM P      D     ++F +  + +     R   +  C L L  +K   + +  C+ E G SGAA+     +K  + GV  AA             D   RF  F  P++
Sbjct:   21 VVDATQPPWNVIGKLRVEAKQSCTATLVSPDTVLTAAHCIYDYKTRSYFSPNKIHFLAGLNAGALVAQSEAMSYTVAAKHLPEGTFDDQALLKDWALVRLRYPVGCMLGHMKP-----GDHTNSFQRFMIAGYPKSD-PSRIHAEQSCKLALPPKKNQMIRIKDCAVEHGDSGAALVGLNGNKATLLGVLSAATN-----------DSKGRFRAFVVPSD 223          
BLAST of EWM22557.1 vs. NCBI_GenBank
Match: gi|1082586300|gb|OFZ17242.1| (hypothetical protein A2X86_01975 [Bdellovibrionales bacterium GWA2_49_15])

HSP 1 Score: 68.9366 bits (167), Expect = 1.355e-9
Identity = 57/179 (31.84%), Postives = 80/179 (44.69%), Query Frame = 0
Query:  101 DRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRMDG-RFLLGYSGGTVLASAGLLHVWYGL-----DPTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLE-KQFSMVAFSRDKFEYR-AGTDPVCSLLSFRK--QARLMVT-TCSGEAGASGAAI 268
            D R       +P   +G L   +   CTATLVGP LILTA HC  +   + +   +    F   Y GG     A ++  W G      +  SDWA+A ++ PLG+ +G  VP  +     L     + ++  +S D    + AG D  C L +  K   AR +VT  C    GASG  I
Sbjct:   26 DNRQPMTSTQYPWTAIGLLAIGNTGVCTATLVGPRLILTAAHCLVDARTKRLQQDITNVVFYPNYMGGKARHGAKVVRSWVGTFDAQNERWSDWAVAELEAPLGKIYG-FVPVVSYTGVFLNFAPSKVTLAGYSTDFLSGQTAGVDVDCQLRAQLKVDDARKVVTHDCDMRPGASGGPI 203          
The following BLAST results are available for this feature:
BLAST of EWM22557.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103102|gb|EWM22557.1|0.000e+0100.00peptidase s1 and s6 chymotrypsin hap [Nannochlorop... [more]
gi|585108905|gb|EWM26814.1|3.492e-3033.61glutamyl endopeptidase family protein [Nannochloro... [more]
gi|1084920500|gb|OGR39132.1|3.689e-1128.89hypothetical protein A2X29_10510 [Elusimicrobia ba... [more]
gi|492955938|ref|WP_006064023.1|2.380e-1028.21glutamyl endopeptidase family protein [Corynebacte... [more]
gi|917002968|ref|WP_051609680.1|3.959e-1026.84S1 family peptidase [Terasakiella pusilla][more]
gi|1105268943|ref|WP_071837131.1|3.979e-1026.61hypothetical protein [Leptolyngbya sp. NIES-3755] ... [more]
gi|1177843034|ref|WP_082869228.1|4.564e-1026.38hypothetical protein [Oleiphilus sp. HI0125][more]
gi|746972312|gb|KIF28974.1|4.833e-1028.11peptidase S1 and S6 chymotrypsin/Hap [Hassallia by... [more]
gi|1024703123|gb|KZZ58020.1|8.112e-1028.18hypothetical protein A3762_08845 [Oleiphilus sp. H... [more]
gi|1082586300|gb|OFZ17242.1|1.355e-931.84hypothetical protein A2X86_01975 [Bdellovibrionale... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8142rna8142Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications