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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101264g1.3864.mrna |
| Orig protein id | gnl|cribi|Naga_101264g1.3864 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:654431..655850 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8139 ID=rna8139|Name=rna8139|organism=Nannochloropsis gaditana|type=mRNA|length=1447bp
GAAGGCGTGTATGGTCTGTGTGGATAGGGGGATAGCGGGGCATTGGGCAT
CAATATTGGAGCTTGGGAGTGTACTGATGAGACTAACGACCAACGACACA
GCGGGCTGTATGGACAGCTTAGGGGATGAGGATGATAGAAAGCAGGCCAC
AGCTCAAGAAGTAAAGCCTGAAGGGGTTGGCAGCAGTGTATCTGGAGATA
ACGGACAGGAAGATGCCAACAAGGGCGGGGCGGACAAGGAACGGGGTGTG
GCAGGGATGAAGAACGAGGAGTCCGAGGAGGCAATGAGGGCCACGCTCGA
TAGAAGAGGAGAGGAAATAGAAGGGAAGAGTGGTGCAACCGGGAAGCATG
TCGGAGCAACAGACACGAGCGTGGAAGAAAAGGACGGAGGTCTGCCCCTC
GAGGTTCCCCCCCGCCTCAAGGAAGAAGGCGTGCCTATACCATCCCTTTC
GCCTCACCCCAAGCAATCACCACCCAAACGCAAACGTGCGAGGTCCCCGT
CCATGGAGGACGCCGAGGGCAAAGGAAGCGGGTCAGAGAAGAAGGAGAAG
GCAAAAGCTCCCCTTCGAGGGGCCGTGGGGGGGAAAGATCGACTCCGCGC
GCTGCACGCGGCCGTGACGCGCGAGGTGGAGACCCTCCTTTCCTCCCCTT
CCTCCTCCCCTTCCTCCCCCCCTTCCTCCTCCTCGTCCTCGCCCGGCCTC
AGTCCTGCGCCTTTTGTAAAACAGCTCCCAGGGCCGACGGAGGGATGCCG
GCGGCAGCGGGCGATTCTGAAGGGGTTGGATTATCTTTACAAACTGGCCA
TAAAGCGGGCGAATTTTGTGTCTTTTGGCGCAGACGTGATCATGACGCTC
ATGGATGTGGCCTCTCAGGCTGCCGATGACCGCGTCAGGAAATCGGCCTT
GCAGAGGGCGGAGGTGTTGGGCCATCTGTGGTTCGAGTCCTTTCCCAGTT
TGGAAGAAATTGCGCGAATGAAAGCGGTGGCCCCCGAGGAGGAGGAGGAG
GGCGAGGGCGAGGAAGAGGGCGAGGGGAGGGGGAGAGCGTTATGTCGTTC
CAGAAGGATGGAGGGACGGGGAAGTGGGGGAGAGGGCGAGGGCGGAAGGG
TGGGGGGGAGGAAGGGGAAGAGGAGGAGGAGGAAGCGCCCGTCCCCGACA
AGGACGATGTGAACACAGCCATCCGCGGCATCATCGTCCTGGCCCGTCTC
GGCCTTCCCGCCTCATCCCTCACCCAAGACCTCCGTAGCTTCCTCAAGTC
CGGGTATGTGAAGGCGAAAGATTTCTTCCGTTTCCACCCCCGGCCCCGCG
GGGAGGGATGGGCCGCGTCTCGGATCGTTTTGCCCCGGGAACGCCCCGCT
TTCGCCTTGGCGGAGGCGGTGGACGTTTCGTTTTATGCGGGGAAAGTGGG
GGTGGATCTGGGGGCGACGGCCGAGGAGGTTGTGCCCTTGTTGCAGG back to topprotein sequence of rna8139 >rna8139-protein ID=rna8139-protein|Name=rna8139|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MQSHILMATSNAAWSPPSSHRRRHRHTRMNSLHLSPPASPPRTSPTIPAL
AGNSKTFCTASCSPPLPLPSSPRSSLFPSSLLLSLLPSALDLHGPSLALT
SPAKRRVHHPSSIPIAASEDDTCAGPSARPAMLACSMAPPSPPSSSSSSF
PLAASPFPPGPSSPDSRPVTQKDSEKKARSILKHLEQSLGVKRRYLSDMK
APFQHFRTRDLLHCLLRSLLQAALHPMQRFLDDVLEQIHEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEDLIHIALPDWRMYFQNFELRVLTNVTRSL
GTKTLHYSVLDPLCLHLFDPRTVDRLTKV back to topmRNA from alignment at KK037247.1:654431..655850+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8139 ID=rna8139|Name=rna8139|organism=Nannochloropsis gaditana|type=mRNA|length=1420bp|location=Sequence derived from alignment at KK037247.1:654431..655850+ (Nannochloropsis gaditana)
CCTATCCACACAGACCATACACGCCTTCCACATTTCCTCGTGGTACGAAA
ATATTGCCTGCCGCCTCACTAAACGAGGCGAATGACACGTATTCATGGAA
ACCACCGCACTGTCGTGGAATAAAACCCCCAAGGCATTTCCAGTCAACTA
TATTATACCTCCTTTTCAGCGGACCGGcgatcgcctccccccccctcata
GTCACCTCCAAATCTCGCTTTCTGCTCGCAGCACGCAACGACGAGTCAGA
AAATCGTTCTGTCCGTCCAATCATCCTTCCATACCCTCGTTTCATTGGAG
GCAGGGCTTTACTCGCCGCTCGAggcactttcctcctctgttttcccctc
ctctcgctccgTGGCAAGACCGCCgaggcccctctctcttgaCCCGCCCT
TTCTCAGCACAAGCCACGCTGTAAACAGATTGCCATGCAATCCCACATTT
TGATGGCCACAAGTAATGCCGCCTGgagtcctccttcctcccacagaCGC
AGACACCGACATACAAGGATGAACTCGCTCCACCTttcacctcctgcctc
tccacCCCGAACCTCTCCCACCATTCCTGCGCTCGCCGGGAATTCGAAAA
CTTTCTgcaccgcctcctgctctccacctctccctttgccgtcctcgccc
cGCTCCTCGCTgtttccctcgtccctcctcttgtccctccttccctccgc
cctcgacctccacGGACCCAGCCTGGCCTTAACCTCCCCGGCCAAGAGGC
GCGTCCAccatccttcttccatcccaATCGCCGCATCGGAGGACGACACA
TGCGCCGGACCATCGGCCCGTCCTGCAATGCTTGCCTGCTCGATggcgcc
tccttcgcctccctcctcctcgtcgtcttccttccctctggccGCCAGCC
CGTTCCCCCCGGGGCCCTCTTCGCCCGACTCCCGCCCTGTCACCCAGAAA
GATTcggaaaaaaaggcgcgaagtATTCTCAAGCACTTGGAGCAGTCCCT
GGGCGTGAAACGTCGGTATCTAAGCGACATGAAGGCGCCCTTTCAACACT
TCCGGACGCGAGACCTCTtgcactgcctcctccgatccctcctccaagcg
gCATTGCACCCCATGCAACGCTTCCTGGACGACGTCCTGGAGCAGAtaca
cgaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaag
aagaagaggaagaggaggaggaggaggaagaggaggaggaggaggaggat
ctgatCCATATTGCCCTTCCGGATTGGCGCATGtattttcaaaattttga
attgAGGGTGCTGACGAACGTGACGCGGTCGTTGGGCACGAAGACCCTGC
ACTACAGCGTCCTGGATCCCTTGTGCCTGCACCTGTTCGACCCGCGCACC
GTGGACAGGCTCACCAAGGT back to topCoding sequence (CDS) from alignment at KK037247.1:654431..655850+ >rna8139 ID=rna8139|Name=rna8139|organism=Nannochloropsis gaditana|type=CDS|length=986bp|location=Sequence derived from alignment at KK037247.1:654431..655850+ (Nannochloropsis gaditana)
ATGCAATCCCACATTTTGATGGCCACAAGTAATGCCGCCTGgagtcctcc
ttcctcccacagaCGCAGACACCGACATACAAGGATGAACTCGCTCCACC
TttcacctcctgcctctccacCCCGAACCTCTCCCACCATTCCTGCGCTC
GCCGGGAATTCGAAAACTTTCTgcaccgcctcctgctctccacctctccc
tttgccgtcctcgccccGCTCCTCGCTgtttccctcgtccctcctcttgt
ccctccttccctccgccctcgacctccacGGACCCAGCCTGGCCTTAACC
TCCCCGGCCAAGAGGCGCGTCCAccatccttcttccatcccaATCGCCGC
ATCGGAGGACGACACATGCGCCGGACCATCGGCCCGTCCTGCAATGCTTG
CCTGCTCGATggcgcctccttcgcctccctcctcctcgtcgtcttccttc
cctctggccGCCAGCCCGTTCCCCCCGGGGCCCTCTTCGCCCGACTCCCG
CCCTGTCACCCAGAAAGATTcggaaaaaaaggcgcgaagtATTCTCAAGC
ACTTGGAGCAGTCCCTGGGCGTGAAACGTCGGTATCTAAGCGACATGAAG
GCGCCCTTTCAACACTTCCGGACGCGAGACCTCTtgcactgcctcctccg
atccctcctccaagcggCATTGCACCCCATGCAACGCTTCCTGGACGACG
TCCTGGAGCAGAtacacgaggaggaggaggaggaggaggaggaggaggag
gaggaggaggaggaagaagaagaggaagaggaggaggaggaggaagagga
ggaggaggaggaggatctgatCCATATTGCCCTTCCGGATTGGCGCATGt
attttcaaaattttgaattgAGGGTGCTGACGAACGTGACGCGGTCGTTG
GGCACGAAGACCCTGCACTACAGCGTCCTGGATCCCTTGTGCCTGCACCT
GTTCGACCCGCGCACCGTGGACAGGCTCACCAAGGT back to top
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