EWM22558.1, cds8115 (CDS) Nannochloropsis gaditana

Overview
NameEWM22558.1
Unique Namecds8115
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:654865..655850 +

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Properties
Property NameValue
Protein idEWM22558.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101264g1.3864.mrna
GbkeyCDS
End range.
End range655850
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:654865..655850 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Homology
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BLAST of EWM22558.1 vs. NCBI_GenBank
Match: gi|585103106|gb|EWM22558.1| (hypothetical protein Naga_101264g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0 
Query:    1 MQSHILMATSNAAWSPPSSHRRRHRHTRMNSLHLSPPASPPRTSPTIPALAGNSKTFCTASCSPPLPLPSSPRSSLFPSSLLLSLLPSALDLHGPSLALTSPAKRRVHHPSSIPIAASEDDTCAGPSARPAMLACSMAPPSPPSSSSSSFPLAASPFPPGPSSPDSRPVTQKDSEKKARSILKHLEQSLGVKRRYLSDMKAPFQHFRTRDLLHCLLRSLLQAALHPMQRFLDDVLEQIHEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDLIHIALPDWRMYFQNFELRVLTNVTRSLGTKTLHYSVLDPLCLHLFDPRTVDRLTKV 329
            MQSHILMATSNAAWSPPSSHRRRHRHTRMNSLHLSPPASPPRTSPTIPALAGNSKTFCTASCSPPLPLPSSPRSSLFPSSLLLSLLPSALDLHGPSLALTSPAKRRVHHPSSIPIAASEDDTCAGPSARPAMLACSMAPPSPPSSSSSSFPLAASPFPPGPSSPDSRPVTQKDSEKKARSILKHLEQSLGVKRRYLSDMKAPFQHFRTRDLLHCLLRSLLQAALHPMQRFLDDVLEQIHEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDLIHIALPDWRMYFQNFELRVLTNVTRSLGTKTLHYSVLDPLCLHLFDPRTVDRLTKV
Sbjct:    1 MQSHILMATSNAAWSPPSSHRRRHRHTRMNSLHLSPPASPPRTSPTIPALAGNSKTFCTASCSPPLPLPSSPRSSLFPSSLLLSLLPSALDLHGPSLALTSPAKRRVHHPSSIPIAASEDDTCAGPSARPAMLACSMAPPSPPSSSSSSFPLAASPFPPGPSSPDSRPVTQKDSEKKARSILKHLEQSLGVKRRYLSDMKAPFQHFRTRDLLHCLLRSLLQAALHPMQRFLDDVLEQIHEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDLIHIALPDWRMYFQNFELRVLTNVTRSLGTKTLHYSVLDPLCLHLFDPRTVDRLTKV 329
The following BLAST results are available for this feature:
BLAST of EWM22558.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103106|gb|EWM22558.1|0.000e+0100.00hypothetical protein Naga_101264g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8139rna8139Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications