rna8137, rna8137 (mRNA) Nannochloropsis gaditana

Overview
Namerna8137
Unique Namerna8137
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1858
Alignment locationKK037247.1:652052..652718 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102773g1.10509.mrna
Orig protein idgnl|cribi|Naga_102773g1.10509
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:652052..652718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102773g1gene7879Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8137rna8137-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22560.1cds8113Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8137 ID=rna8137|Name=rna8137|organism=Nannochloropsis gaditana|type=mRNA|length=1858bp
TCAGTTTCTTAATGCACGGAAACCATTTTCCTGCCAAATGTTCGGCTTTA
GGTGTGCACAGGCTGGCGCCATAGTCTACATCTGTCATCTCCAGGCGCTC
GCTCAAGCCCGAGAAAGCTACGGCTTCACGTAGGAAACTATCGGTACACG
GTGCACTTTTTACGCCGTAAATGCGCAAATGACATTGATTCGATGCGTGC
ATGAAGTCGACAAGCATTCCTACCGATTTCCTTGTGGTCCTGAGGAAAGA
CAGGGACAGGTGAAATGGCGCCGGCAGGAAGATCCTTCCACGTGCGCTTG
TCGATCCACGCACTAGCCTTTCTCCTACTTTCCGCCCGCGGCGTTTTTGC
CTTCCTTCCGTCCTATCCGAGACCTCCTCTGGTACCGTCACCGTGTCGTA
CCCTTTTAGACCCCGGCCGCCGCAGCTTTTCGATACGCATGTCCGCGGCG
GTAGACAAATCACCGACCCGTCCTGAGCGTGTTTGGTCCACGCTCTTCGA
TCCGGAAAAGGCGGCTCGTTTGGGCGCTTTCTCATTTAGTGTGTATGGTG
ACCCCAACACCGCCCGGTACTATCGGGCCCATGACGGCACGGACATTGGC
TTCCCTTCTGACGACGTCGTTCACCGCAATTTCCAGCACATGCTCTCCGT
CCGCATCCAACGGGCCAGGGACCTGCCCACGGCCACCAATTTGGTGGAGA
AAGTGCTCCAGCGCTCCTTAGACCCTCAGCCAGTCGTCACCGTGGAAGTC
CTGTCCACCCACGGCTCCGACGTCGCTGTCACGCCTATCGCCGAGTCGAC
TCCCGGCCCCGCCGCCTCCGAGACGCCGGTCTATCTGTACGTGGAAGATG
TGGCCAACGCCTGCTTTCGCGTGGCCGTGCACGACCTTAAGAGTCTGGGG
GAGGACGCGCTCCTGGGCCAGGCAGAGATGCCCTTGGCTGAATTGTGCAA
GGACGGGGCATGGGAGGGATGGATCGATGTGATGGATTCTGAAGGAGCGT
CGCAAGGAAGCGTGGAGGTGGCGCTTCGACTGCTGCCGTTGGAGGGAGAG
GGGGCCAGCGACAAGGAGAAAGTGGCAGGGGGGGCGGGAAGGGAGAAGCA
GGAGGAAGGGAAAGAGGGAGGGAAGGGAAAAGAGCCGACGAAGGCTGTGG
TGGAGCTGGATTGGGACGTGCTGGCGTCTAAAATCCGAGGTGGGGAAGTA
GGGGGTATGGGGGCATACGCCCTGGCCGCCTTCTTGAGCAACCCGGAGAC
GGACACACAGGGGGCCATTTGGGAGAACCAGAAGGACAAGGAGCTCGTCA
TTTGTTTCCGAGGGACGGAGATCGGTTGGAAGGACCTGTTGACGGACGCC
ATGATCCTGCAGCAGCCCTTGGATGATACCCGGAGGGAGGACCCGCGCCG
CGTCCACGCGGGCTTTTTGCGGGCGTTTCGGGCGGTGAAAAATGCGGTGT
ACACGGCCTTGCATTTTGTTCGGCACGGGGACTTGGACGGGTGGAAAATC
GACGTCTGCGGGCATTCCCTGGGGGGGGCCTTGGCCACCTTGCTGGCCCA
TGATTTGGCGGAACGATACCCGGAGATGGCGGCGTCAGGGAGGTTGCAGA
TGTATTGCTACGGTGAGTGGGGAGGGGAGGAGGGAAGGTCATGCTTTTTT
TGGCCTTTTTGAATGGATATATCTGGGTACAGACTGCTCGTTGGCGGCGG
GGTCTCCTCGTGAGCTGCCGAGGCGCTTCCTCCCACCTCCGACGGCCTAC
AATATCAAGAAGTTTCGTATCATACCTCCCTGGCATAACTCCCGCGCGGC
GCGTGGTCATGAATGCATGCATGGTAGCCCTTGTCCTCCTTCTCACCTTC
CCTCCCCC
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protein sequence of rna8137

>rna8137-protein ID=rna8137-protein|Name=rna8137|organism=Nannochloropsis gaditana|type=polypeptide|length=220bp
IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQ
IDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYR
NGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTA
SLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFED
RYYRALEMAFADLKERREGG
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mRNA from alignment at KK037247.1:652052..652718+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8137 ID=rna8137|Name=rna8137|organism=Nannochloropsis gaditana|type=mRNA|length=667bp|location=Sequence derived from alignment at KK037247.1:652052..652718+ (Nannochloropsis gaditana)
ATCGTCGCCCGGGTTCCTAGGGCCACCAGGGCGCCTTCCCTGGTCGAGTA
CGACCACGTGGGCCGCACCGTCCTCATCTCTTTCGAGCCTGAGGGGGACC
TCAACGTCTTCATCGAAGGCCAATCTCCGGGAATCTGTCCCTTGCGCCAG
ATCGATCAActgggcagcgaggaggtcgacgcggcggaggacggaggaaa
ggcgtCGTCCGAGGGAGGCATTGCCGGGGTGAACTTCAACCTTCCTTTGG
AAGATctcgcgcattttttgagCATGCCCGTCTCGGCCGCCGTGTACCGG
AACGGCTCAGCGCCCTCCATCCAAGATTTGCTTCAGCTCGCGTCCAACGT
GAGCAACCTCTCGTCGATGCTGAGGCAGGGGCCCGTGGGCCTTTTTGACG
GGCTGAGTGCCCGGGAGGATGTGCGGGAGGTGACGGACAACCTCACCGCG
AGCCTGAAAGacaaggcggacgaggcgggaaaagaggtgCAGAAAATGGC
TCTGGGGAGcgtggggctggaggagaagttcgtggcgggggaggtgaagc
TGATCGAGTCCTTGAtccgaggggaagggatcaACGACCACTTTGAGGAC
CGGTACTACCGGGCGTTGGAGATGGCGTTCGCGGACCTGAAGGAacggcg
agagggggggtaggggg
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Coding sequence (CDS) from alignment at KK037247.1:652052..652718+

>rna8137 ID=rna8137|Name=rna8137|organism=Nannochloropsis gaditana|type=CDS|length=663bp|location=Sequence derived from alignment at KK037247.1:652052..652718+ (Nannochloropsis gaditana)
ATCGTCGCCCGGGTTCCTAGGGCCACCAGGGCGCCTTCCCTGGTCGAGTA
CGACCACGTGGGCCGCACCGTCCTCATCTCTTTCGAGCCTGAGGGGGACC
TCAACGTCTTCATCGAAGGCCAATCTCCGGGAATCTGTCCCTTGCGCCAG
ATCGATCAActgggcagcgaggaggtcgacgcggcggaggacggaggaaa
ggcgtCGTCCGAGGGAGGCATTGCCGGGGTGAACTTCAACCTTCCTTTGG
AAGATctcgcgcattttttgagCATGCCCGTCTCGGCCGCCGTGTACCGG
AACGGCTCAGCGCCCTCCATCCAAGATTTGCTTCAGCTCGCGTCCAACGT
GAGCAACCTCTCGTCGATGCTGAGGCAGGGGCCCGTGGGCCTTTTTGACG
GGCTGAGTGCCCGGGAGGATGTGCGGGAGGTGACGGACAACCTCACCGCG
AGCCTGAAAGacaaggcggacgaggcgggaaaagaggtgCAGAAAATGGC
TCTGGGGAGcgtggggctggaggagaagttcgtggcgggggaggtgaagc
TGATCGAGTCCTTGAtccgaggggaagggatcaACGACCACTTTGAGGAC
CGGTACTACCGGGCGTTGGAGATGGCGTTCGCGGACCTGAAGGAacggcg
agagggggggtag
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Synonyms
Publications