EWM22560.1, cds8113 (CDS) Nannochloropsis gaditana

Overview
NameEWM22560.1
Unique Namecds8113
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:652052..652714 +

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Properties
Property NameValue
Start range652052
Start range.
Protein idEWM22560.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102773g1.10509.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:652052..652714 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22560.1 vs. NCBI_GenBank
Match: gi|585103109|gb|EWM22560.1| (hypothetical protein Naga_102773g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 441.039 bits (1133), Expect = 1.904e-156
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query:    1 IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAFADLKERREGG 220
            IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAFADLKERREGG
Sbjct:    1 IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAFADLKERREGG 220          
BLAST of EWM22560.1 vs. NCBI_GenBank
Match: gi|585109793|gb|EWM27527.1| (Lipase, class 3 [Nannochloropsis gaditana])

HSP 1 Score: 112.079 bits (279), Expect = 8.082e-25
Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 0
Query:    1 IVARVPRAT-RAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEG-GIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGP-----------------VGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAF 210
            IVAR+PR T R+  L+EY+H GRTVL++   EG   V++EG+S G+CPL++ D   S    +  D    + +G G   + F L           P+S A + NG+  S+Q++L+ A N++NL +ML   P                  G F  LS + D+ +V + +  +  +     GK        S+GL E F+  E+ LI+ L+ GE +  H E  YY ALE AF
Sbjct:  478 IVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQL-----------PISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGK--------SLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAF 687          
BLAST of EWM22560.1 vs. NCBI_GenBank
Match: gi|553193009|ref|XP_005855691.1| (hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526] >gi|422293367|gb|EKU20667.1| hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 111.309 bits (277), Expect = 1.211e-24
Identity = 76/229 (33.19%), Postives = 116/229 (50.66%), Query Frame = 0
Query:    1 IVARVPRAT-RAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEG-GIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGP-----------------VGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAF 210
            +VAR+PR T R+  L+EY+H GRTVL++   EG   V++EG+S G+CPL++ D   S    +  D    + +G G   + F L           P+S A + NG+  S+Q++L+ A N++NL +ML   P                  G F  LS + D+ +V + +  +  +     GK        S+GL E F+  E+ LI+ L+ GE +  H E  YY ALE AF
Sbjct:  375 LVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQL-----------PISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGK--------SLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAF 584          
The following BLAST results are available for this feature:
BLAST of EWM22560.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585103109|gb|EWM22560.1|1.904e-156100.00hypothetical protein Naga_102773g1, partial [Nanno... [more]
gi|585109793|gb|EWM27527.1|8.082e-2533.62Lipase, class 3 [Nannochloropsis gaditana][more]
gi|553193009|ref|XP_005855691.1|1.211e-2433.19hypothetical protein NGA_2011810, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8137rna8137Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications