EWM22560.1, cds8113 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22560.1 vs. NCBI_GenBank
Match: gi|585103109|gb|EWM22560.1| (hypothetical protein Naga_102773g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 441.039 bits (1133), Expect = 1.904e-156 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query: 1 IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAFADLKERREGG 220
IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAFADLKERREGG
Sbjct: 1 IVARVPRATRAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEGGIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGPVGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAFADLKERREGG 220
BLAST of EWM22560.1 vs. NCBI_GenBank
Match: gi|585109793|gb|EWM27527.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 112.079 bits (279), Expect = 8.082e-25 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 0
Query: 1 IVARVPRAT-RAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEG-GIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGP-----------------VGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAF 210
IVAR+PR T R+ L+EY+H GRTVL++ EG V++EG+S G+CPL++ D S + D + +G G + F L P+S A + NG+ S+Q++L+ A N++NL +ML P G F LS + D+ +V + + + + GK S+GL E F+ E+ LI+ L+ GE + H E YY ALE AF
Sbjct: 478 IVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQL-----------PISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGK--------SLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAF 687
BLAST of EWM22560.1 vs. NCBI_GenBank
Match: gi|553193009|ref|XP_005855691.1| (hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526] >gi|422293367|gb|EKU20667.1| hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 111.309 bits (277), Expect = 1.211e-24 Identity = 76/229 (33.19%), Postives = 116/229 (50.66%), Query Frame = 0
Query: 1 IVARVPRAT-RAPSLVEYDHVGRTVLISFEPEGDLNVFIEGQSPGICPLRQIDQLGSEEVDAAEDGGKASSEG-GIAGVNFNLPLEDLAHFLSMPVSAAVYRNGSAPSIQDLLQLASNVSNLSSMLRQGP-----------------VGLFDGLSAREDVREVTDNLTASLKDKADEAGKEVQKMALGSVGLEEKFVAGEVKLIESLIRGEGINDHFEDRYYRALEMAF 210
+VAR+PR T R+ L+EY+H GRTVL++ EG V++EG+S G+CPL++ D S + D + +G G + F L P+S A + NG+ S+Q++L+ A N++NL +ML P G F LS + D+ +V + + + + GK S+GL E F+ E+ LI+ L+ GE + H E YY ALE AF
Sbjct: 375 LVARMPRGTGRSAVLMEYNHCGRTVLLTETEEGQFRVWVEGESEGVCPLKEGDAFASTTDKSVSDLRAIAMKGKGDKELEFQL-----------PISKATFSNGTTASVQEMLRAAGNLTNLEAMLSFKPSTDILASFSGSPSSWPPSGPFGQLSLQTDLFQVANAVFGTALNSTAFIGK--------SLGLNETFIDSELNLIKGLVYGEALAHHMEPLYYLALEKAF 584 The following BLAST results are available for this feature:
BLAST of EWM22560.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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