rna8130, rna8130 (mRNA) Nannochloropsis gaditana

Overview
Namerna8130
Unique Namerna8130
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1064
Alignment locationKK037247.1:642337..642972 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102894g1.8512.mrna
Orig protein idgnl|cribi|Naga_102894g1.8512
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:642337..642972 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102894g1gene7873Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22567.1cds8106Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8130rna8130-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8130 ID=rna8130|Name=rna8130|organism=Nannochloropsis gaditana|type=mRNA|length=1064bp
CCTTCCTCCCCCAGGGCCACCTGAGCCGGCTGACAGACGCGCATTCGACC
ATGATCCGAGTCCGCGACACGCCGGTTCCCTACCCCTACCTCCTCATCCT
GAACGTTGCCACCTTCATCTTCGTGTACAGCACCCCCTTCCTCTACAACA
CGGGGCCCCAGGGCCGCTACTGCGGCGTCCAGCTCCTGGTCGTGGCCTAC
TACGGTGCGGGCTCGTCTATATGTACACATATACCTATGTATATATAAAT
ATGTATATATATATGTATACATGTATATATGCTCCTTGTGTCGGTGGAGG
ATTCGTTCTCGTGCCCGTTGCTTTGCTGGGCCTTCCCTTTCCTCTCTCTT
TATAGGACTCCTTCCTTGCCCCTGTCTGTCCTCACGTCTCGCCATCGGAG
GGTCCTTCTCCCCCTCAGGCTCTTTCTATCCCCTCCCTCCCTCCCTCCCT
CGTCCTCCCCCCCAGGGATCCTGAACATTGGCCGTAGCATTGAGAACCCG
TACGCCTGGGAAACCTTCGGTACGCGACCCTTTCTCCCTCCCTCCCTCCT
TCCCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCATCCCCCCTCTTTCCC
TCCTTTCCTCCCCCAGACATCGATTTCGAAGGCTTCGCCATCCAGCTGGC
CCGAGACTTGAATTCGATCGCCACCGCCTTGCAAGACGACCGAGCCGCCT
TCCTGAAGGAGTTGGTGCAATCCCACCAAGACCGAGAGGACGGGCCCCAA
GGCTGACCAGGCCCGTGTCCTCCGGGTATCATGGCGGTGGATAGGGGTGG
AGGGAGGAGGGGGTAAGCAGTAGGAGCAGCGGGCAATGACACCAGCCCCC
TTGCCTTGCACGGTGAAGGGGCCTTATGGCAAGTCGAATGTGGCGGGGGA
GAGGAAGGAGAGGGATGTACAGGGAGCGTTGGAAGAGGCGAAGCTTCGAC
GTAAACGACCGGGGTATGACGGGCAAATGGTAGTCATGACGGAAGAATCG
CTCATTACGAATTGAAATAATGGAATGTTATGATGACACAAGAATAATCG
ACTGAGTGAAACAA
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protein sequence of rna8130

>rna8130-protein ID=rna8130-protein|Name=rna8130|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
RRLEPDHPVPENPGQDPGDPQGLHRPPPPDAGPYPRLHHPLRVGGQRRHR
GRAHFGASRLGGERESHPRLQNLAMGGHEQGGAGNGCGGGGSGGGCGRDG
EEEVGRKEGRKGGREGQGEYQPRRDVRGWPSGLVWRIFDGRREGGREGGR
EGGREGGREGGREGGREGGRR
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mRNA from alignment at KK037247.1:642337..642972-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8130 ID=rna8130|Name=rna8130|organism=Nannochloropsis gaditana|type=mRNA|length=636bp|location=Sequence derived from alignment at KK037247.1:642337..642972- (Nannochloropsis gaditana)
AGGCGTCTTGAACCGGACCATCCTGTACCCGAAAATCCGGGCCAAGACCC
TGGAGATCCTCAAGGGCTACATCGTCCACCCCCTCCTGACGCCGGCCCAT
ATCCACGACTACATCACCCCCTCCGAGTGGGGGGACAACGCCGGCATCGT
GGGCGCGCTCACTTTGGCGCAAGTCGCCTTGGAGGAGAAAGGGAAAGCCA
CCCTCGCCTACAAAATCTGGCAATGGGTGGACACGAACAAGGGGGGGCTG
GTAACGGGTGTGGTGGCGGGGGCAGCGGCGGCGGCTGTGGCCGTGATGGG
GAGGAGGAAGTAGGGAGGAAGGAAGGGAGGAAGGGAGGAAGGGAGGGGCA
GGGAGAGTACCAACCTAGGCGGGACGTTCGGGGGTGGCCCAGTGGGCTCG
TGTGGAGAATCTTCGATGGACGACGTGAGGGGGGCCGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGA
GGGAGGGAGGAGGTGAAGGAGAAGGAGGGTTAGGGAAAGGGGGGGGGAAA
GACTTTTTGAAGGGTCCAAGGGGTCTCCCAGGCGGCGCCAGGCAGGCACC
GGCGTGGAATCTGCGTGTCGAATGGGAGGAAAGTGG
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Coding sequence (CDS) from alignment at KK037247.1:642337..642972-

>rna8130 ID=rna8130|Name=rna8130|organism=Nannochloropsis gaditana|type=CDS|length=516bp|location=Sequence derived from alignment at KK037247.1:642337..642972- (Nannochloropsis gaditana)
AGGCGTCTTGAACCGGACCATCCTGTACCCGAAAATCCGGGCCAAGACCC
TGGAGATCCTCAAGGGCTACATCGTCCACCCCCTCCTGACGCCGGCCCAT
ATCCACGACTACATCACCCCCTCCGAGTGGGGGGACAACGCCGGCATCGT
GGGCGCGCTCACTTTGGCGCAAGTCGCCTTGGAGGAGAAAGGGAAAGCCA
CCCTCGCCTACAAAATCTGGCAATGGGTGGACACGAACAAGGGGGGGCTG
GTAACGGGTGTGGTGGCGGGGGCAGCGGCGGCGGCTGTGGCCGTGATGGG
GAGGAGGAAGTAGGGAGGAAGGAAGGGAGGAAGGGAGGAAGGGAGGGGCA
GGGAGAGTACCAACCTAGGCGGGACGTTCGGGGGTGGCCCAGTGGGCTCG
TGTGGAGAATCTTCGATGGACGACGTGAGGGGGGCCGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGA
GGGAGGGAGGAGGTGA
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Synonyms
Publications