EWM22567.1, cds8106 (CDS) Nannochloropsis gaditana

Overview
NameEWM22567.1
Unique Namecds8106
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:642457..642972 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22567.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102894g1.8512.mrna
GbkeyCDS
End range.
End range642972
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:642457..642972 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22567.1 vs. NCBI_GenBank
Match: gi|585103118|gb|EWM22567.1| (hypothetical protein Naga_102894g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 309.686 bits (792), Expect = 4.427e-106
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 RRLEPDHPVPENPGQDPGDPQGLHRPPPPDAGPYPRLHHPLRVGGQRRHRGRAHFGASRLGGERESHPRLQNLAMGGHEQGGAGNGCGGGGSGGGCGRDGEEEVGRKEGRKGGREGQGEYQPRRDVRGWPSGLVWRIFDGRREGGREGGREGGREGGREGGREGGREGGRR 171
            RRLEPDHPVPENPGQDPGDPQGLHRPPPPDAGPYPRLHHPLRVGGQRRHRGRAHFGASRLGGERESHPRLQNLAMGGHEQGGAGNGCGGGGSGGGCGRDGEEEVGRKEGRKGGREGQGEYQPRRDVRGWPSGLVWRIFDGRREGGREGGREGGREGGREGGREGGREGGRR
Sbjct:    1 RRLEPDHPVPENPGQDPGDPQGLHRPPPPDAGPYPRLHHPLRVGGQRRHRGRAHFGASRLGGERESHPRLQNLAMGGHEQGGAGNGCGGGGSGGGCGRDGEEEVGRKEGRKGGREGQGEYQPRRDVRGWPSGLVWRIFDGRREGGREGGREGGREGGREGGREGGREGGRR 171
The following BLAST results are available for this feature:
BLAST of EWM22567.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103118|gb|EWM22567.1|4.427e-106100.00hypothetical protein Naga_102894g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8130rna8130Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications