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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100893g2.3196.mrna |
| Orig protein id | gnl|cribi|Naga_100893g2.3196 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:629720..633043 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8122 ID=rna8122|Name=rna8122|organism=Nannochloropsis gaditana|type=mRNA|length=911bp
AAGAAGAAGAAGAAGGGGGGTAGGGAGGCGGAGGAGGAGGGAAAAGAAGG
GCCGCTTCATGCGGGAGGAGGAGGAGGGAAGAACGGTAGCAAAGCTCCTG
AGGAGAGAGAGATAGGTGAGGAGGAGGGCAGGGGTGAAAGAGAAGGCATC
AATATGGAAGGGAGCGCGGAGTGGAACGGCGAAGAGACGGGTCAAGGGGA
GGAGGAGGCTCTATCGGGTGTTAGGGAGATACCGGGGGGGGAGGAAGAGG
AGGAGATAGGAAGGTTGTCGGGCCCCGACGCCGCGGCCTCCGTTCCTTCT
CCCGTGGCGGTTGCGAGGGCTCGGGAGCTGCATGTGGCGATTTTGTCCTT
GGAAGAGCGGGTGGGCCAGGCAGCCGACGAGGAAGACTACGAGGCGGCGG
GGGCGCTGCAAGAGGAATTGGAGGGTTTGCGGGAGGAGATGGCGGCCTTG
GGTCCAATTGATGTGGTGCATTTGATCATGGACTCTTCGGAAGAGGAGAA
GGAGGAGGAGGTGGGGGGATGACGGGAGGGAAAGGAGGAGGGAGGAGGGG
AAAGGCGCATCGGGGGGAGGAAGCGAACAAAAGGATTACGTCGTGGAGCT
GCGCAAGCGAGGAATTAAACAGTTTACGTGGCTATGACCACGCATGTGCA
AAGTAATATGAACGTCAAATCAGTCCAGCGAACGGGTAAATTGAAAACAA
AAAGTAAGAAATGCTTTCGGTGTGCTGATGACAGGAAGATCAGGGGGGCC
GCGGGGCAGCAATGCATTGGGTTTCCGGCATTGAAAGACCTCACAGGCCA
AATCCAGCCTTCAATCAAGTTTTAAGAGTTTTATGGCCTAATTAAATTCG
CATTGAGTGGTTTCAAATACCTAATTCGTGTGCAATCATCCTCGCAAACA
GGCACGAAAGC back to topprotein sequence of rna8122 >rna8122-protein ID=rna8122-protein|Name=rna8122|organism=Nannochloropsis gaditana|type=polypeptide|length=766bp
MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPAS
SSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVV
EKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGL
VGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAK
YDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSST
IGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEE
ETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQ
GGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGD
MERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWP
EVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAA
TAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDE
DLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVF
LEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFH
VEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDV
DQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPPPPRRVSRPWPG
VWVSPRTPATTYWARP back to topmRNA from alignment at KK037247.1:629720..633043+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8122 ID=rna8122|Name=rna8122|organism=Nannochloropsis gaditana|type=mRNA|length=3324bp|location=Sequence derived from alignment at KK037247.1:629720..633043+ (Nannochloropsis gaditana)
GCAGCCACGTACACATAGGACCAAGACGGTGGATCTTATCACACGAGAGA
TACTTTGACGGGAAGGCGTACGTGTGGAAGGTTCCCCTGAAACGCATCGC
GCCCGTACAACACGACAGAGGGcagggagcagcagcaacttTTATAGCAG
GCTCGAGTGGAGCATGCGGCGGCAGCGACGCCAAGGCTGCTCAATGGCTT
TCGTTTGCATACTGCTAGTAATAAGCCTCATAGGTGGAAGTGAAGCCTTC
ATCGTTCCTGGGAGTAGGATAAGACCAATACCGTccatcccctctttttc
gtctccagcctcctcctcctctagaAGAAGTTTCCAACCGCCCACGACGG
CCctctcatctccctctcggcGCTTCCCATCCTTTGCTTCTCGACGACTG
GGCGGAAGGAGCCTCACCATGCTGAAGGAGCCCCAAGGCAGCGACGCTTT
TGCccgcgtggtggagaaggaaggaaagctcaGTCCCCTCGCCAAGCTCC
ATTCTGGGCCGGCACAAATCTTGAAGGTGACCACCGTGCCCCTGGCCGCA
GTGGGAGGATTTCTGGCCACGCCCAAGGGTGCCGGCGGCATGTTCCGTGT
CTTTGGGGGCCTGGTTGGGGGCTTGGTCTTGAAGGAAGTGAACTCCAAAC
TCCGGACCATGCGGCAGGCCGgcgcggaggtggcggtggcccGCTTGCTC
CTCGACTACGAATCGGACATCGCCTCGTTGACACCTTCGGCCGTGAAGGC
CGTCACGGCCAAGTACGACGTGAACTACGCGGAGCATTTGGAAATCATGC
GGACCCTGTATACCTCCTTCTTGGTGGCCATGTTGCAATGGCCCCAAGTC
CGGATGCAGGAGCCCGCGTCCTTGATGGACCTGTCCGCCGCCTTGGGCCT
CGACTCCTCCACGATTGGCGACGCGCACTGTgcggccgcggaggaagtgg
cgcgGATGCTGGCGGAGGTGCccttggaggagcgggaggaggcctgggag
cAGGGCATGGTGGGaaagctcctcttcctctcggaCCGGCTCTATGccca
gctggaggaggaggaaacccgGGAGTATGAGTTGGGAAGGGTGACGGAGG
TGCTGGGGCTGACCCctaaggaaggggaggagcgcgTCCGCAGCTTGGTC
TTGCCGTACTACACGAACATTGTGCAGAACGGGGTGACAGCCCTGCGCAC
GGGGGAGGCCCAAGGCGGCCCCAGGGACGGGCCCACGCTCTTGGAGTGGC
GACAGAGCCTGGGGGTCTCGGAAACACAAGCCAACGGCTTGCACGCTCAG
GTgttcgcggaggaggtgacgcggtgcctggaggcggggcaaggcCGGAT
CCGGGACGGCGACATGGAGCGGTTGAGCAGCCTCCGCAAGTTCCTGGGAA
TCACGTCCTTGGACGCCGAACGTGTCTTGGAAGGGGTGACGGCGCCCATG
CTTCGACAAGCGATCGTGGAGATGCTGACGCGGTTGACCTCCACCCCTTC
GGACACATGGCCCGAGGTGCTCGGGCACGTGCGGCAACGCCAGAAGGAGC
TGCACATGGTGGACtccgccctcgtcttccacATCAAGGACGTGTACCGG
GAGCGGTTGAAAGGCCTGGTCCAACAGGCCAACGACGCGGCGCTGCCCTT
GGAAACAGCGGCCACCGCGGCGGCGttgggggaggcagggggccCACCGG
GCCTGGCGGAGACGGCCTCGAAGCTGTGCAAATCAGTGGGTGCGGCCATG
CTGCTCATGCGCCTGATGCGGGAATTCTTGGAGGTGAACAAattggagga
cgtgatggacgaagacctcttccacctctccttcctgggcCTGTTGCCGG
GGGAAATGACCCAGCGGGAGCGCGAGATCACCTTCAGGCAGTACGTtgcg
gcggtggtggaggcgaagcttgtggacgacgagggggggaacaTCAACGC
CCTGGGCGTGTTCTTGGAGATGGACCCGGCCTACGTCCGGTACACGCTCA
AGTCCCTGGTGGGCCCCATCtacgaggagaaggtccgGGAAttcgtggtg
gagaaggaggcgatgacGGAGGCGAACCAGGCGGTGTTGTTGCAGCTGGT
GCGGGATTTccacgtggaggaagcggacaTGCAGCGCATCGGTCTGAAAT
ATTACGGGGAGAAGGCTCGGGGCTtctgggagaagaagcaggagtTCAGC
GAGGGGGAGTTGGGGGAGCTGGCCTCGCTCaagagcttcctcctcctgtc
cgaCCGGGACGTGGACCAGATCCACGAGCCCCTCGCCCGCGACGCGTTCC
TCCAGGCCGTCCAAGCCGACTTTGCGCGACAAAAGaaggccgccgaggcc
gacCTCACCgccgcgccctccgccccgccccccccccggcgagtttccag
gccctggcccgGCGTTTGGGTCTCTCCGAGGACGCCCGCGACGACCTATT
GGGCGAGGCCTTGACGGCCCATGTGTCGCCCTTGCTGTCCTCGCTCAAGG
GCAATTTCCGGCGGGTGACGGCcccggcggcggaggcggaggcccggggg
gtggacgagggagaggacccgTTCATTAAGGCtcggagcaaggagggcct
GATGATCAAGACGGAGCGCAACACGAATTTGATGCTGGAAGCGGTGGAGC
TGGTGAATTTCTTGGAGAAGAACGACGGCTTTCGGACGACGAGCATGAAT
TTGGACGATGAGGGGCACATGGCCAAGAAGAGCGTGGACGCCTCCCAAGG
CCGACGCACCGTGACGTCCTACATCTGCAAGGCCTCCATgggggggccgg
gcgagGGGAGCTCGGGGAgccaagggaaagaggacgcggaggcggACAGC
AAGATGGCGGAAGAGATGTACAAGGCCTTCGTCCAAaccgtggcggtggc
gccggagggggagaagaaagagcgCTACCGGGTGATCCAGGACAAGTTCG
GGGCTGCCTTGGgcatccaccctccccggATGGAGGCCTTGAAATTCAAT
CTGTACGCATCCCAGATGCGGAAACTTGTTCGGCAGTGCCTGGAGGTGAA
GGGGTtgatgggggcggaggacaacGCGGCCCTGGCCCGTTTGAACCTGG
AATATTCGATcgggaaggagcgggcgggcCGGTTGGTTCAAGCGGAGAAA
CAGAAATGGTTGGCGGGGACCTTGGTGAGTCTGATCCAAGCGCCGCCGAA
CGTGCTCGGCCCCACCATCAACAAGCTGAGGACGACGGCGGCCAACCTGG
GCATCGATCTTTCCGAGGACGTGCCCGAGTTGACCCCCGGGAACAAGGAG
TTCTTGttcgggaaggaggtaggt back to topCoding sequence (CDS) from alignment at KK037247.1:629720..633043+ >rna8122 ID=rna8122|Name=rna8122|organism=Nannochloropsis gaditana|type=CDS|length=2301bp|location=Sequence derived from alignment at KK037247.1:629720..633043+ (Nannochloropsis gaditana)
ATGCGGCGGCAGCGACGCCAAGGCTGCTCAATGGCTTTCGTTTGCATACT
GCTAGTAATAAGCCTCATAGGTGGAAGTGAAGCCTTCATCGTTCCTGGGA
GTAGGATAAGACCAATACCGTccatcccctctttttcgtctccagcctcc
tcctcctctagaAGAAGTTTCCAACCGCCCACGACGGCCctctcatctcc
ctctcggcGCTTCCCATCCTTTGCTTCTCGACGACTGGGCGGAAGGAGCC
TCACCATGCTGAAGGAGCCCCAAGGCAGCGACGCTTTTGCccgcgtggtg
gagaaggaaggaaagctcaGTCCCCTCGCCAAGCTCCATTCTGGGCCGGC
ACAAATCTTGAAGGTGACCACCGTGCCCCTGGCCGCAGTGGGAGGATTTC
TGGCCACGCCCAAGGGTGCCGGCGGCATGTTCCGTGTCTTTGGGGGCCTG
GTTGGGGGCTTGGTCTTGAAGGAAGTGAACTCCAAACTCCGGACCATGCG
GCAGGCCGgcgcggaggtggcggtggcccGCTTGCTCCTCGACTACGAAT
CGGACATCGCCTCGTTGACACCTTCGGCCGTGAAGGCCGTCACGGCCAAG
TACGACGTGAACTACGCGGAGCATTTGGAAATCATGCGGACCCTGTATAC
CTCCTTCTTGGTGGCCATGTTGCAATGGCCCCAAGTCCGGATGCAGGAGC
CCGCGTCCTTGATGGACCTGTCCGCCGCCTTGGGCCTCGACTCCTCCACG
ATTGGCGACGCGCACTGTgcggccgcggaggaagtggcgcgGATGCTGGC
GGAGGTGCccttggaggagcgggaggaggcctgggagcAGGGCATGGTGG
GaaagctcctcttcctctcggaCCGGCTCTATGcccagctggaggaggag
gaaacccgGGAGTATGAGTTGGGAAGGGTGACGGAGGTGCTGGGGCTGAC
CCctaaggaaggggaggagcgcgTCCGCAGCTTGGTCTTGCCGTACTACA
CGAACATTGTGCAGAACGGGGTGACAGCCCTGCGCACGGGGGAGGCCCAA
GGCGGCCCCAGGGACGGGCCCACGCTCTTGGAGTGGCGACAGAGCCTGGG
GGTCTCGGAAACACAAGCCAACGGCTTGCACGCTCAGGTgttcgcggagg
aggtgacgcggtgcctggaggcggggcaaggcCGGATCCGGGACGGCGAC
ATGGAGCGGTTGAGCAGCCTCCGCAAGTTCCTGGGAATCACGTCCTTGGA
CGCCGAACGTGTCTTGGAAGGGGTGACGGCGCCCATGCTTCGACAAGCGA
TCGTGGAGATGCTGACGCGGTTGACCTCCACCCCTTCGGACACATGGCCC
GAGGTGCTCGGGCACGTGCGGCAACGCCAGAAGGAGCTGCACATGGTGGA
CtccgccctcgtcttccacATCAAGGACGTGTACCGGGAGCGGTTGAAAG
GCCTGGTCCAACAGGCCAACGACGCGGCGCTGCCCTTGGAAACAGCGGCC
ACCGCGGCGGCGttgggggaggcagggggccCACCGGGCCTGGCGGAGAC
GGCCTCGAAGCTGTGCAAATCAGTGGGTGCGGCCATGCTGCTCATGCGCC
TGATGCGGGAATTCTTGGAGGTGAACAAattggaggacgtgatggacgaa
gacctcttccacctctccttcctgggcCTGTTGCCGGGGGAAATGACCCA
GCGGGAGCGCGAGATCACCTTCAGGCAGTACGTtgcggcggtggtggagg
cgaagcttgtggacgacgagggggggaacaTCAACGCCCTGGGCGTGTTC
TTGGAGATGGACCCGGCCTACGTCCGGTACACGCTCAAGTCCCTGGTGGG
CCCCATCtacgaggagaaggtccgGGAAttcgtggtggagaaggaggcga
tgacGGAGGCGAACCAGGCGGTGTTGTTGCAGCTGGTGCGGGATTTccac
gtggaggaagcggacaTGCAGCGCATCGGTCTGAAATATTACGGGGAGAA
GGCTCGGGGCTtctgggagaagaagcaggagtTCAGCGAGGGGGAGTTGG
GGGAGCTGGCCTCGCTCaagagcttcctcctcctgtccgaCCGGGACGTG
GACCAGATCCACGAGCCCCTCGCCCGCGACGCGTTCCTCCAGGCCGTCCA
AGCCGACTTTGCGCGACAAAAGaaggccgccgaggccgacCTCACCgccg
cgccctccgccccgccccccccccggcgagtttccaggccctggcccgGC
GTTTGGGTCTCTCCGAGGACGCCCGCGACGACCTATTGGGCGAGGCCTTG
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