EWM22576.1, cds8098 (CDS) Nannochloropsis gaditana

Overview
NameEWM22576.1
Unique Namecds8098
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:629883..632183 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22576.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100893g2.3196.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:629883..632183 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
Homology
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|585103132|gb|EWM22576.1| (hypothetical protein Naga_100893g2 [Nannochloropsis gaditana])

HSP 1 Score: 1550.03 bits (4012), Expect = 0.000e+0
Identity = 766/766 (100.00%), Postives = 766/766 (100.00%), Query Frame = 0
Query:    1 MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPASSSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVVEKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPPPPRRVSRPWPGVWVSPRTPATTYWARP 766
            MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPASSSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVVEKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPPPPRRVSRPWPGVWVSPRTPATTYWARP
Sbjct:    1 MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPASSSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVVEKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPPPPRRVSRPWPGVWVSPRTPATTYWARP 766          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|553194872|ref|XP_005856044.1| (hypothetical protein NGA_2115700, partial [Nannochloropsis gaditana CCMP526] >gi|422293016|gb|EKU20317.1| hypothetical protein NGA_2115700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1489.55 bits (3855), Expect = 0.000e+0
Identity = 739/739 (100.00%), Postives = 739/739 (100.00%), Query Frame = 0
Query:    1 MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPASSSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVVEKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPP 739
            MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPASSSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVVEKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPP
Sbjct:    1 MRRQRRQGCSMAFVCILLVISLIGGSEAFIVPGSRIRPIPSIPSFSSPASSSSRRSFQPPTTALSSPSRRFPSFASRRLGGRSLTMLKEPQGSDAFARVVEKEGKLSPLAKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQADFARQKKAAEADLTAAPSAPP 739          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|298707473|emb|CBJ30096.1| (IAP100 protein [Ectocarpus siliculosus])

HSP 1 Score: 117.472 bits (293), Expect = 2.622e-23
Identity = 99/379 (26.12%), Postives = 175/379 (46.17%), Query Frame = 0
Query:   86 MLKEPQGSDAFARVVEKEGKLSPL----AKLHSGPAQILKVTTVPLAAVGGFLATPKGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEV-ARMLAEVPLEEREEAW--EQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRD-----GDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEV 452
            ML EP G D+F + +E+E    P+    +K+  G A+ +    +P+A+  G+LA P G        G +  G+       KL+  RQ  A   VA LL D +  + ++TP  +      + +      +I+  +++ ++VAM Q    +  E   L +L   LGLD   +G+A   AA  V ++ +   P  E  + W   +  + K +FL DR++   + EE   +E+ R++++  L   E +ER  ++  P+Y         AL +  A+        L   RQ+LG+ E  A+ +H +V+  E  + ++   G  RD      D  RL  L     ++  DA    E V  P+  + +VE L ++ + P  + P++
Sbjct:    1 MLVEPMGKDSF-KQIEEEVDSDPIKKSVSKMTPGVAKAVLTGVIPIASAVGYLAMPGGVA--VSAIGAVASGVGGNLARKKLKQARQDSAPAQVAGLL-DAKG-VGNITPLEIMESLGSFGLEGEAAEDILIQIFSKYVVAMCQNSATKTSEIKELSELRETLGLDGLLMGEALYQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMSRISKMFDLNLGEVKERCAAIANPFYQK-------ALGSAAAKWESVKADQLKRARQTLGMDEEVAHEMHKEVYRSEALKLVKK-DGEARDMKLDRADKARLGKLAAAFELSEEDATAEYESVVNPIYEELVVECLGKIMNEPETSKPDL 366          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|546310764|ref|XP_005714453.1| (unnamed protein product [Chondrus crispus] >gi|507110895|emb|CDF34634.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 117.087 bits (292), Expect = 2.659e-23
Identity = 132/533 (24.77%), Postives = 229/533 (42.96%), Query Frame = 0
Query:  191 PSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAA-----EEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHM-VDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVD-DEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAV 716
            P  V+ +  K+ ++  +  E+  T Y  +L+AM+  P V   E + L  L AA  L  +++GDAH  A        V  M AE    ER+ A  Q  + KLLFLSDR+Y   E EE   YE  R+ +   +     EERV  + LP+Y ++V          ++  G  D   LL  + +LGV + QA  + +  +A+ V   L + +G++ + D E L+ LR  L I    A   L  +  P+ R  + E L  +     +++  + G +  RQ EL    D+A V   K++  ER    ++             TA+         G      +L +     + L+++          +DV DE     S++  +   +++ E    +R Y++  +E++L+  ++   +  L   L +         K+  GP+Y++ V +  V      +  +A + ++  D  +     + I L  Y  K     +  +   E E  EL  L+ FL LS  D   +H+      + Q+V
Sbjct:   11 PPLVQGMKGKFGLSDEDLTEMCETTYELYLLAMVAVPDVSFGEISQLGRLKAAFRLGGASVGDAHFEACRAFYRNNVVYMDAEDDDFERDAA--QRKLDKLLFLSDRMYEDKETEEAYRYEQSRLFKFFSMNKDRYEERVARVALPFYKDVVARACV-----DSSVGSED---LLAAQATLGVKDIQAERIRSDAYADRVD-SLVSQKGKLNEVDNESLARLRTLLKIGDDRASSTLTTLAEPVYRMEVGEALDAVKKA-EESFASIYGRLALRQSELSFPSDAARVAMSKEI-SERASDHIR-------------TASKYLRVQNVNGCITQLKELLQYTEGIVGLLKVSN--------DDVQDETAIIKSYMPKVASVLSRMEPRQMYRIYLSKCLESRLIGPEQETQLARLRAVLGLTEEVALEAFKTAAGPVYKKAVSD-AVAAGTFDDERKAGITKIKDDLALPLETSKSIDLDIYRNKLTRLVDGNRILQEHESQELFVLREFLGLSPEDAAPVHKSCMGPVYEQSV 508          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|1210532172|dbj|GAX09238.1| (hypothetical protein FisN_17Lh296 [Fistulifera solaris])

HSP 1 Score: 115.931 bits (289), Expect = 7.934e-23
Identity = 129/479 (26.93%), Postives = 220/479 (45.93%), Query Frame = 0
Query:   72 PSFA--SRRLGGRSLTMLKEPQGS-DAFARVVEKEGKLSPLAKLHSGPAQILKVTT---VPLAAVGGFLATPK------GAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRT-LYTSFLVAMLQW-PQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLA-EVPLEEREEAW--EQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRC---------------------LEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQ----AIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEA 508
            PSF+  S+     SL+ML E  G  +    + EK  + + L K       + K+ +   +P++A+ GF   P        AG +     G VG        S+L  + Q+GA+ A+A+ ++D   +  + T +AV+ V   + ++  E LE++ T +Y S+L  M+++ P  +  E   L  L  AL L +  +G+AH  AA E  R      P EE E+    ++  + KLLFLS+R  ++ +  +   +E+ RV + +GLT     ERV S+V P+Y   +Q+  + L T            L   R++LG+ E  A  +H   F +EV  C                     L+    +  D  + RL SLR  LG++ +D +  +    +P+ +     A+ ++LT+   TP + W      + +R++EL M + +    I  +  + L G +++ N  A     AAT   L EA
Sbjct:   40 PSFSISSKARTAASLSMLVETSGGMEELQELTEKADQTNFLGKQIRQSPNLFKLASYASIPVSALLGFGLVPSRRIAAHAAGALVTGIAGAVG-------KSRLDVLTQSGAKPALAQAIVDAGLEDVTKTQAAVRDVQDSFGLS-DEDLEVLCTEIYASYLHGMVKFQPTAKTSEIKELQKLKQALSLQNMAVGEAHATAAAEWYRQTCLFTPTEELEDPKHPDRLAMDKLLFLSERALSE-DSPQAFNFEMTRVAKAVGLTLPVAMERVASVVEPFYHRALQSTRSKLGTNAVS-----SDMLKRARETLGIKEEVAADMHVFTFNQEVRVCLGLPERKMNDDDEEEEEEAMPLDLSSLKFSDEALNRLDSLRDILGLSEMDMDYEIISEASPLYQTTALAAMKDVLTK-NKTPEEAW----NIMEKRREELLMHEDSTKALISSMVMQALGGPLEETNRFAKVNNEAATYDHLLEA 499          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|1210528238|dbj|GAX13353.1| (hypothetical protein FisN_17Hh296 [Fistulifera solaris])

HSP 1 Score: 114.775 bits (286), Expect = 2.001e-22
Identity = 126/476 (26.47%), Postives = 218/476 (45.80%), Query Frame = 0
Query:   73 SFASRRLGGRSLTMLKEPQGS-DAFARVVEKEGKLSPLAKLHSGPAQILKVT---TVPLAAVGGFLATPK------GAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRT-LYTSFLVAMLQW-PQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLA-EVPLEEREEAW--EQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRC---------------------LEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQ----AIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEA 508
            SF+S+     SL+ML E  G  +    + EK  +   L K       + K+    ++P++A+ GF   P        AG +     G VG        S+L  + Q+GA+ A+A+ ++D   D  + T +AV+AV   + ++  E LE++ T +Y S+L  M+++ P  +  E   L  L  AL L++  +G+AH  AA E  R      P EE E+    ++  + KLLFL++R  ++ +  +   +E+ RV + +GLT     ERV ++V P+Y   +Q+  + L T            L   R++LG+ E  A  +H   F +EV  C                     L+    +  D  + RL  LR  LG++  D +  +    +P+ +     A+ ++LT+   TP + W      + +R++EL M + +    I  +  + L G +++ N  A     AAT   L +A
Sbjct:   43 SFSSKARTAASLSMLVETSGGMEELQELTEKADQTIFLGKQIRQSPNLFKLAGYASIPVSALLGFGLVPSRRIAAHAAGALVTGIAGAVG-------KSRLDVLTQSGAKPALAQAIVDAGLDDVATTQAAVRAVQDSFGLS-DEDLEVLCTEIYASYLHGMVKFQPTAKTSEIKELQKLKQALSLENMAVGEAHATAAAEWYRQTCLFTPTEELEDPKHPDRMAMDKLLFLTERALSE-DSPQAFNFEMTRVAKAVGLTLPVAMERVANVVEPFYHRALQSTRSKLGTNAVS-----SDMLKRARETLGIKEEVAADMHVFTFNQEVRVCLGLPERKMNDDDEDEEEDEMPLDLSSLKFSDEALNRLDLLRDILGLSETDMDYEIISEASPLYQTTALAAMKDVLTK-NKTPEEAW----NIMEKRREELLMHEDSTKALISSMVMQALGGPLEETNRFAKVNNEAATYDHLLDA 499          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|544216182|ref|XP_005538236.1| (similar to chloroplast inner membrane protein Tic110 [Cyanidioschyzon merolae strain 10D] >gi|449018798|dbj|BAM82200.1| similar to chloroplast inner membrane protein Tic110 [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 113.235 bits (282), Expect = 6.797e-22
Identity = 130/532 (24.44%), Postives = 214/532 (40.23%), Query Frame = 0
Query:  209 LEIMRTLYTSFLVAMLQWPQV-RMQEPASLMDLSAALGLDSSTIGDAHCAAA-----------------EEVARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQ-LEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQG----RIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVD-DEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAV 716
            LE +  LY  +L+A++Q     R+ E   L  L +A GL    +GDAH   A                 ++V     +    ER +   Q +  KLLFLS R+     E EE   YE+ R+  V  L+  E + RVR + +P+Y   V+  V  L     QG       L   R+ L V +  A+ LH + +   V R L+A       R+   DM  L   R+ L I + DA+ +L     P+ +Q +     R+  +     P   G +  R++EL +         +   R R+  +++   DA   L        + E     GL   +  +   V    ++     +      LE +M           +L  E+   ER+  +R Y+A  +E +++D  EG N++ L   L +             GP+Y E V E +  +   T+A+   L Q+  D H+       I ++ Y E+        +  SE E  +LA L+  L L    +  +H  +    + Q+V
Sbjct:  299 LETLVGLYERYLLALVQTSGTPRVSEVRQLKALRSAFGLSHVDVGDAHHQVAMRFRRENFVYIDDYIRAQDVDDRNYDEIFRERAQDVNQKL-SKLLFLSARVLDDPTEPEEAYRYEMARLRNVFDLSESEFQARVRDIAVPFYQTAVRKAVWLLE----QGRSITLEKLRSAREMLDVDDGTASRLHLEAYGALVQRLLQAHSNEKVPRLSAKDMSVLQEARRLLDIDAGDADALLRDAAEPLYQQEV----ERVVESADLRIPTAHGRLAVRREELGLSVELARTAAEKWIRGRVTAILK---DATRALRVQNLTMTIEELNRLLGLIRRSLSIIHGVVWEEVVPNSAEQRTVNASLERIM----------SVLLDELADLERQQLYRVYLAKCLEDRMIDAQEGRNLDDLRAVLRISENEAAQAYNRAAGPVYREAVLEVMANRSEFTDADIQSLNQIAGDLHIPAKVAHDIRMELYRERLEASTRDNRVPSEEESSQLARLRELLQLDSEALAALHASVCAGTYAQSV 808          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|676387023|ref|XP_009036790.1| (hypothetical protein AURANDRAFT_63826 [Aureococcus anophagefferens] >gi|323452938|gb|EGB08811.1| hypothetical protein AURANDRAFT_63826 [Aureococcus anophagefferens])

HSP 1 Score: 112.849 bits (281), Expect = 1.051e-21
Identity = 158/629 (25.12%), Postives = 256/629 (40.70%), Query Frame = 0
Query:   90 PQGSDAFARVVEKEGKLSPLAKLHSGPAQ---ILKVTTVPLAAVGGFLATPKGAGGMFRV--FGGLVGGLVLK-EVNSKLRTMRQAGAEVAVARLLLD--YESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARML---AEVPLEEREEAWEQGMVGKLLFLSDRLYAQLE----EEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLL-EWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQ--YVAAVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDV 700
            P  SDAF +V +  G  + L    +GP       K  TV  AA+ G L       G   V   G LVGG V +  V   L   R    +  +A LL D     D  ++T + V AV  +Y +     + ++  +YT +L+ +++ P V+  E   L+ L   LGLD+   G+AH   A EV   L    +  L++ E A E   V KLLFLSDR +A        +E   YE+GRV  V GL   + E+R  ++  P+Y   +   +  L +          P +L   R  LG+++  A+ +H   +  EV   L A    + D D  RL SL   L +    A      +T P+   A  + +             +   + + + +L + DSA     +   RE L    + A D AL L+              PG   + S+L       M + + +   ++        D   F    LG     +T +   ++  +  YV  + +A L D     + AL   L + P+      + ++ P  + K+ E + E       ++  L   V +     A ++    + Y ++ R +  +    S     +L SL++FL LSD DV
Sbjct: 1061 PAASDAFGKVADDCGAAADLFA-KTGPTVGELASKSATVAGAALAGVLMP-----GSLVVSGVGALVGGSVTRLAVAPTLVEGRYKAMQAKIAGLLRDAAVAGDWTTVTSAEVDAVVREYGLPGDYSVALLCQIYTKYLLEVMRMPDVKTAEMNDLVALREILGLDAEAAGNAHYDVAVEVYGQLQWTGDEVLKDPESA-EHKTVSKLLFLSDRAFAGTAADSVSDEAYGYEVGRVRAVFGLEQADLEDRCSAIAAPFYDRALAGTLEKLDSVN--------PDMLARARAKLGITDQTASDMHLDCYTAEVGELLAANGNSLSDADDARLESLATILAVPKDAAAEATATLTVPLYVAATRDAVEAGIGADDAAAAALGPSLDKMKVDLRLTDSAAEGVFRSAVREVLAAPYKAATD-ALKLQNT------------PGALASVSRL-------MDVQKGVETVVKTAPFLSGADAGSFFDDLLG-----VTGKSLPLSLYKLVYVEKLGDA-LDDGAKAELGALAKTLSLTPSDTALVHEQILAPKLDIKLGEMLRE----ATPDRTDLDAWVANVDFPAALLKEKMERAYTDRIRAYSSENSILSVERKAQLDSLQAFLELSDEDV 1644          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|922858483|gb|KOO26613.1| (plastid import iap100 protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 107.071 bits (266), Expect = 4.216e-20
Identity = 152/620 (24.52%), Postives = 254/620 (40.97%), Query Frame = 0
Query:  116 PAQILKVTTVPLAAV---GGFLATP------KGAGGMFRVFGGLVGGLVLKEVNSKLRTMRQAGAEVAVARLLLDYESDIASLTPSAVKAVTAKYDVNYAEHLEIMRTLYTSFLVAMLQWPQVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEV-ARMLAEVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMREFLEVNKLEDVMDEDLFHLSFLGLLPGEMTQREREITFRQYVAAVVEAKLVD-DEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFV------VEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHE----PLARDAFLQ 714
            PA I KV    L AV    GF  TP         GG+    GG V          +L  +RQ  A  AVA LL      +A  TP  + A+ A+YDV   E    +  LY  ++ A L    V   E + L+ L   L L S+ +G    AAA ++ +R  A   LE+ E    + ++ K +FL++R+ A+ E  E  +YE+ R+ ++  LT KE         +P+Y         AL +   +  P     L   R SLG++ + A+ +HA +F   V+  L +  GR+ D D +RL++++  L ++   +   L  +TAP+      ++L ++     +    +   +              +   + V    LK + +   D +L    A+          P  L    S +           RL    + +N+ E   D D    +  G + GE+ Q E    +R  +   +E   VD  +   ++ L V L +  A      ++  GP++   +++ V      VE++A  EA+       + D  +  +    I +  Y  K R      +   E     L+SL++FL L   +V  +HE    P  RD+  Q
Sbjct:   67 PAPIAKVAMGGLVAVSGMAGFALTPSRRIPVNAIGGVITAIGGNVA-------RKRLLAVRQKAAIPAVAALL---SKGLAKATPEGLAAIAAEYDVPKKEFQSQLAELYLIYISACLNAHAVETSELSDLLRLQKLLRLSSAQVGGQMFAAARQLFSRHRA--YLEDTEPNDSKRLLTKFVFLAERVLAEDESPEGYKYEVLRLQKLFSLTVKEWRAMAEDAAVPFYEK-------ALNSAVMEAKPVTAEQLAAVRASLGIAASCADRMHADIFKRSVSTALSS--GRLSDADKDRLAAIQTLLEMSDSASSESLRALTAPLYATTFEKVLGKIGELEGEVNERMSAQLAGELTLRQQELLLQLADTRPVEAVVLKKVAKARLDESLQFLRASNL--------PASLKSVQSLVS-------FCARLANFLVSINRAEG--DVDAAIATLFGGIKGEVKQSEVLGLYRALLLHFLEDLKVDAADAATLDRLRVILGLQAAESASIYQAAAGPLFRAALQKAVEGSKYGVEQKAAIEAS-------LTDLALPASVTLSISMDVYSAKLRSIAGAGKLMEEESTAGLSSLRNFLGLEMANVQALHEEVCGPSYRDSVRQ 641          
BLAST of EWM22576.1 vs. NCBI_GenBank
Match: gi|1189386136|gb|OSX73262.1| (hypothetical protein BU14_0363s0002 [Porphyra umbilicalis])

HSP 1 Score: 103.99 bits (258), Expect = 4.071e-19
Identity = 135/538 (25.09%), Postives = 230/538 (42.75%), Query Frame = 0
Query:  197 VTAKYDVNYAEHLEIMRTLYTSFLVAMLQWP-------QVRMQEPASLMDLSAALGLDSSTIGDAHCAAAEEVARMLA-------EVPLEEREEAWEQGMVGKLLFLSDRLYAQLEEEETREYELGRVTEVLGLTPKEGEERVRSLVLPYYTNIVQNGVTALRTGEAQGGPRDGPTLLEWRQSLGVSETQANGLHAQVFAEEVTRCLEAGQGRIRDGDMERLSSLRKFLGITSLDAERVLEGVTAPMLRQAIVEMLTRLTSTPSDTWPEVLGHVRQRQKELHMVDSALVFHIKDVYRERLKGLVQQANDAALPLETAATAAALGEAGGPPGLAETASKLCKSVGAAMLLMRLMRE-FLEVNKLEDVMDEDLFHLS-FLGLLPGEMTQREREITFRQYVA-AVVEAKLVDDEGGNINALGVFLEMDPAYVRYTLKSLVGPIYEEKVREFVVEKEAMTEANQAVLLQLVRDFHVEEADMQRIGLKYYGEKARGFWEKKQEFSEGELGELASLKSFLLLSDRDVDQIHEPLARDAFLQAVQ 717
            + A Y V+  +  +++R +Y  +LV M+           V  Q+   L+ L AALGL  + +G+AH  A  E  R          E    ER+ A  Q  + KLLFLS R+ A  E +E   YELGR+ +  G++  +   RV  +  P + ++V   +          G      L   + +LGVS+  A  L  Q +   V   L   +G+I   D+E L+ LR  L +   + E VL     P+ R A VE   +  +  + +    +G +  RQ +L +          DV R  L   V+ +  A   ++TA+    +   GG     +    L     + + L++  RE F      E         L  ++G L   + ++E    +R +++  + + K+ ++E  ++  L   L +  A      KS  GP+Y  K     VEK  +++A++    QL  D ++ +   + + ++ Y  K R      +   EGE   LA L+ +  LSD DV  +        +LQ+V+
Sbjct:  174 IAATYGVDTGDFRQMLRRVYELYLVEMVSASPADASGGVVTNQQMTELVRLKAALGLTGAEVGEAHYEAGREFYRANVVWLDGSDEDGKLERDSA--QAKLDKLLFLSARVLADGETDEATTYELGRIAKFFGISEADVAARVERISKPLFGHVVSRAIV--------DGSLQRSDLAAAQAALGVSDASARALGLQAYTSRV-HALVTEKGKINASDVESLARLRTLLALGDSEGETVLIESAQPVFR-AEVEGAVKGVTDGTLSVSSAVGRMAVRQSDLALP--------ADVCRSALTATVRTS--AVALVKTASKYLRVQNVGGT---VDQVKALLAYADSVLPLLKAARETFGGPAASEGAAWSSAATLRVYMGNLAAAVGRQEPRSLYRLFLSDCLADIKIDEEESESLARLRAILSISDAEAVDAYKSAAGPVY-RKATLAAVEKNDLSDASRLAKDQLKTDLNLPKETWKPMDVEVYEAKLRSLMSGGRVLQEGEAASLAQLRIYFGLSDEDVATVTRSAVAPVYLQSVE 685          
The following BLAST results are available for this feature:
BLAST of EWM22576.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103132|gb|EWM22576.1|0.000e+0100.00hypothetical protein Naga_100893g2 [Nannochloropsi... [more]
gi|553194872|ref|XP_005856044.1|0.000e+0100.00hypothetical protein NGA_2115700, partial [Nannoch... [more]
gi|298707473|emb|CBJ30096.1|2.622e-2326.12IAP100 protein [Ectocarpus siliculosus][more]
gi|546310764|ref|XP_005714453.1|2.659e-2324.77unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|1210532172|dbj|GAX09238.1|7.934e-2326.93hypothetical protein FisN_17Lh296 [Fistulifera sol... [more]
gi|1210528238|dbj|GAX13353.1|2.001e-2226.47hypothetical protein FisN_17Hh296 [Fistulifera sol... [more]
gi|544216182|ref|XP_005538236.1|6.797e-2224.44similar to chloroplast inner membrane protein Tic1... [more]
gi|676387023|ref|XP_009036790.1|1.051e-2125.12hypothetical protein AURANDRAFT_63826 [Aureococcus... [more]
gi|922858483|gb|KOO26613.1|4.216e-2024.52plastid import iap100 protein [Chrysochromulina sp... [more]
gi|1189386136|gb|OSX73262.1|4.071e-1925.09hypothetical protein BU14_0363s0002 [Porphyra umbi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8122rna8122Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications