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Properties
| Property Name | Value |
|---|
| Product | Ion transport 2 |
| Orig transcript id | gnl|cribi|Naga_100155g1.10223.mrna |
| Orig protein id | gnl|cribi|Naga_100155g1.10223 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:609484..611371 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8117 ID=rna8117|Name=rna8117|organism=Nannochloropsis gaditana|type=mRNA|length=2154bp
TTTTCGAACACGGCCGCATAGTACCACAAGCCTTAGTTTCCTATCCTTCT
GTTGTACAGGGGAGTGTTGGAGGAAGGAGAATTCAAAAAGGTCTTATGAC
TGATGGTAAAGTGATTGCTTCAATGCTGAAAGCTCATCACACAGGCATCA
CAATCACACAGCACTGTGCTATACAGCAATTGCTACAACATCAAGAGCAA
AAAAGCGAACGGCGGAAAACATTGCGCGATGAGCAGCAGTGACGGAGAAG
ATAGCAGGGTGGGAAACGAGGGGGAAAGCCCTGGGAATGAAGAGGGCAGA
CGGTTGAAGCACAAGTCAAAAAAGCACAAAAAGCACTTTACAACGGAGAA
AGGGGAAAAAAGTCGGAAAAAGGAAAAAAAACACAGCCATCGAAAAGACC
ATCGGCATCGACGGGATCAAATGAGCGCAGAGAATGAGAGCAGAAAGGGC
AGTAGCGAGGGTAAGCACACAGAGGAGGTTAGCATAGAGGACGGGAAGAG
GAAGAAAAAGCGACACCGGCATGAGAGCGAGGAGGAGGAGAGGCGGCTGG
TGAAAGCGGCCAAAAAGTATTTGGAGAAACATGGCGGAGGCGGACACGAA
GAAAGGAAGACAAAAGCTGATAGAAAAGAGGAGAAGCACGAGAAACATCA
CAAGAAATCCCACGACAAGAAAGCAAAGAAGAAGAAAAAGGAAGGGAGGG
ACGAGGAAAAGGACGCAGAATTAGAGAAAAGCCCTCCTGCACGAGCTATT
CCAGAGGTGCTGAGCGCGGAGGATGACTACTACCGTCGCCAGGCAGAGTT
CAGGGTGTGGCTGCGACTGATCCGGAAATTGAACTTTGAGGACCTTCCCC
GTGAGGAAGCTCAAGACCAATTTGCGCGTTTCGTCGCTCTCTGGAACCAG
GGTCGCCTGCCCGACATGTACTACGACGGCGTCCCGGTCCACATGCAAAC
GGAGGCCCACAAAACCACCCATACCTGGGGTTTTGCGGCGAAGATGAGTG
AGGACGAGAAGGACGCCTTGGACCGGATGGCCAACAGCATTGTCCGGAGC
AGCACGGCGCCCCCCGGGGCGGGGAAAGCTGGAGGAGACGGCGTCAAGAA
TAGAAACGGGGCTTCCGCGGCCGCAAGCAGGATGGGGGGGGAAGGTGGGA
ACGGGGTTGGCTCAACGAGAAGTCAGCCGCAGCTCTCTCAGAGGGACTCG
ACGAGGGCAGGACCCAGTAGTGCCTTCGAAGAGGCGTATGCCAAGCCCAC
AGGTCGGGAGGCTGTGTTGGCGGCGCGACATGCGAAAGGTGAGCGGCTGC
ATGGGGCTGCCCGGGCGAAGGAGGAAGGGAGGGATGGCCTGGACATGCCA
GAGGAGGCGCTGGGCTTGGGAGAGAGGGACACGGAGAAGGAGGAGGTCAG
ACGGCGGCAGGCTCGGCAGAATACACGCGTCAATCAACGGCAGACGGAGC
AAGAAAGGCGGATGGAGGAGGCGGCGAGGAAGGAGAAGGACGCGATGCAG
AAGCTAATGGACACGTTGGGGCTGCAGCCTGGCCAGAAAATCGTGATTCC
GAAACGAGGGCCGACGGGGTAATACAGAAGGGGTTTGAATACGAAGGGAG
AATACGGTACACAAAGAGGAAATAACCACAATGATAAAAGAGACCACATT
GACGAACAGAAAGGCCGATAAGCAGTCGCAAAAAGCAAGTATCTGTCCTG
TCAAAGACCTCTTGATATGCGTCATGAAAATGGAAAAAAATCACGACGCG
TCTTGTCATCTGTTCATGAATGGCAGCTCTTGAAGAAGGTCGAGGACAGT
ACGTGAAGAATGGAATAATCGTAATCAAGGACAGTTGGTTTTGTACACTG
ACTGCTTATCAATATATGTACGTCTTATATGTGATGAGTAGAGGTTTGGC
TTACTTGTGGGGGAAGAAGTTAAAGTACTGGTAACCCTTTTGATGAATAT
CGGACAGAGCTTATTCGTAGATATGTCTTTTTTGTAGCGGCGCACATACT
TGGACACATCTGATACGCATCTCTCTACATAAATACTTTCTCTCCCATCG
TTACAATAGAAATAGCCACAAGAATATCGCGAGCATTGTGAGTAAAAAAA
GCATACACAACGAAGGTGTTGGAGGAAAGGAAACAGAAAAAATACATATT
CGCG back to topprotein sequence of rna8117 >rna8117-protein ID=rna8117-protein|Name=rna8117|organism=Nannochloropsis gaditana|type=polypeptide|length=408bp
MESDPQTTLLDPLSTYEPKGIHNGGGLQTAPSTFPQHPRSFPPTHRETVV
RKQQRRRRGRPCEDAAHPAWAWHEDEGFDYCEAGGAEEGEGTGENSYWGH
AEEVDEEANRRGRVAGLLGGVKPWTASLYHGPGLFCLWRRRRGRWEGKPG
ALGVEEEEAKGAEVEEGKMNEAEEAGREDGQPQEGPRWAWPGMRGGGEKR
VRFSRTSASSLPERPSASSLPERPSAASWQALQRMSTVSVDFLKKQDRRP
VQMAWAFFVVYVLAGLWYFMFFKALDFHNALFQIINSLSAVGYGYFSPST
PIEQALTVVFLFVGVGFMGSLIGIVASSRLDFQEDVKKEWLARQEGKEGG
GDGGGEALEEEEEEPGMSLMRIQMQRARQRVVWNIARIMLAILAGTVVLV
PLEGWTWG back to topmRNA from alignment at KK037247.1:609484..611371+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8117 ID=rna8117|Name=rna8117|organism=Nannochloropsis gaditana|type=mRNA|length=1888bp|location=Sequence derived from alignment at KK037247.1:609484..611371+ (Nannochloropsis gaditana)
CGGTCAGctcaccccttcctcacAAACCTTTACGCAGGACTCTTCCCGTT
CTTTCGACATCATTTTTGAGACTCAGGTGCGCCAGTGGTGAAAGCGCTGG
ACTCGACGGCATCAAGATCCTTTATCACATCATGGGGGTGTAAAAAGGAG
ACGGAAAAAGGGGCATACATCCCTTTTCTGCGGCATTTCGGGTCTAGGTT
CATGTCCTAGGCCTTGCATTCTCAATTAAAATATCCAAGCCCGCGATGGA
GAGCGACCCACAGACGACGTTGCTCGATCCATTAAGTACATACGAGCCCA
AAGGCATTCATAATGGGGGAGGGTTGCAGACTGCACCCAGTACCTTCCCT
CAACATCCCCgatccttcccgcccacTCACCGCGAAACGGTCGTGCGGAa
acagcagcggcggcggcgtggGCGTCCATGCGAGGATGCTGCCCATCCTG
CTTGGGCATGGCATGAAGATGAAGGTTTCGACTATTGCGAGGCTGGCGGg
gctgaggaaggggaagggacaggCGAGAATTCATACTGGGGCCACGCTGA
AGAAgtagacgaggaggcgaacaGGCGCGGGCGTGTTGCAGGATTGCTTG
GCGGTGTGAAGCCCTGGACGGCCAGTCTTTACCATGGCCCTGGCCTGTTT
TGTctgtggcgaaggaggagagggaggtgggaaggaaagcccgGGGCCCT
TGgtgtcgaggaagaggaagccaagggggcggaggtggaggaggggaaaa
tgaacgaagcggaagaagcaggaagggaggatgggcaaCCTCAGGAGGGG
CCGCGGTGGGCGTGGCCAGGcatgcggggagggggggagaaacgGGTCCG
TTTCTCCCGAACCTCCGCCTCGAGTCTGCCTGAgcggccctccgcctcga
gtCTGCCTGAGCGGCCCTCCGCCGCGTCCTGGCAGGCCTTGCAACGGATG
TCAACCGTTTCCGTGGACTTTTTGAAGAAACAGGACCGGAGGTGCGGTGC
CTGGTGTGGAGGTCGGAGGGCGTGTCTTGGggtgatggggatggagggcg
ttTCAGGGGGtgattgggagggagggcgtttCAGGGggtgatggggatgg
agggcgttTCAGGGggtgatggggatggagggcgtttcagggggtgatgg
ggagggagggcgtttCAGCTTGCAGGCGGCTCCCTGGGCCGTCCCATACG
GACTTGGAAgtcatctccccctcctcccctccctccctccctccctccct
ccctcaggcccgTGCAGATGGCCTGGGCCTTCTTCGTCGTGTACGTGCTG
GCCGGCCTCTGGTACTTCATGTTCTTCAAGGCCCTCGACTTCCACAACGC
CCTCTTCCAGATCATCAACAGCCTCAGCGCCGTCGGGGTAGGGACGTGTc
ctgggtgggagggggactCTTGGGAtcttgggaggaggagggtcggCTCC
GTGCATTTGAACGTTTGAAAGACTTGAAAACTTGAATTTGCGTTTCACCG
ACGcgccccttcgccccctGGTCCTTCCCCCTGGCAGTACGGCTATTTTT
CCCCCAGCACGCCCATCGAGCAGGCCCTGaccgtcgtcttcctcttcgtc
gggGTGGGCTTCATGGGCTCGCTCATCGGGatcgtcgcctcctcccgcct
ggatttccaggaggacgtgaagaaggagtggCTGGCccggcaggaaggga
aggagggcgggggggatggcgggggggaggctctggaggaggaggaggag
gaaccgGGCATGTCCCTGATGAGGATACAAATGCAGCGGGCGCGGCAACG
CGTGGTCTGGAATATTGCGCGAATCATGCTGGCGATCctggcggggacgg
tggTGCTGGTCCCACTCGAAGGGTGGACGTGGGGGTAG back to topCoding sequence (CDS) from alignment at KK037247.1:609484..611371+ >rna8117 ID=rna8117|Name=rna8117|organism=Nannochloropsis gaditana|type=CDS|length=3681bp|location=Sequence derived from alignment at KK037247.1:609484..611371+ (Nannochloropsis gaditana)
ATGGAGAGCGACCCACAGACGACGTTGCTCGATCCATTAAGTACATACGA
GCCCAAAGGCATTCATAATGGGGGAGGGTTGCAGACTGCACCCAGTACCT
TCCCTCAACATCCCCgatccttcccgcccacTCACCGCGAAACGGTCGTG
CGGAaacagcagcggcggcggcgtggGCGTCCATGCGAGGATGCTGCCCA
TCCTGCTTGGGCATGGCATGAAGATGAAGGTTTCGACTATTGCGAGGCTG
GCGGggctgaggaaggggaagggacaggCGAGAATTCATACTGGGGCCAC
GCTGAAGAAgtagacgaggaggcgaacaGGCGCGGGCGTGTTGCAGGATT
GCTTGGCGGTGTGAAGCCCTGGACGGCCAGTCTTTACCATGGCCCTGGCC
TGTTTTGTctgtggcgaaggaggagagggaggtgggaaggaaagcccgGG
GCCCTTGgtgtcgaggaagaggaagccaagggggcggaggtggaggaggg
gaaaatgaacgaagcggaagaagcaggaagggaggatgggcaaCCTCAGG
AGGGGCCGCGGTGGGCGTGGCCAGGcatgcggggagggggggagaaacgG
GTCCGTTTCTCCCGAACCTCCGCCTCGAGTCTGCCTGAgcggccctccgc
ctcgagtCTGCCTGAGCGGCCCTCCGCCGCGTCCTGGCAGGCCTTGCAAC
GGATGTCAACCGTTTCCGTGGACTTTTTGAAGAAACAGGACCGGAGgccc
gTGCAGATGGCCTGGGCCTTCTTCGTCGTGTACGTGCTGGCCGGCCTCTG
GTACTTCATGTTCTTCAAGGCCCTCGACTTCCACAACGCCCTCTTCCAGA
TCATCAACAGCCTCAGCGCCGTCGGGTACGGCTATTTTTCCCCCAGCACG
CCCATCGAGCAGGCCCTGaccgtcgtcttcctcttcgtcgggGTGGGCTT
CATGGGCTCGCTCATCGGGatcgtcgcctcctcccgcctggatttccagg
aggacgtgaagaaggagtggCTGGCccggcaggaagggaaggagggcggg
ggggatggcgggggggaggctctggaggaggaggaggaggaaccgGGCAT
GTCCCTGATGAGGATACAAATGCAGCGGGCGCGGCAACGCGTGGTCTGGA
ATATTGCGCGAATCATGCTGGCGATCctggcggggacggtggTGCTGGTC
CCACTCGAAGGGTGGACGTGGGGGTAGATGGAGAGCGACCCACAGACGAC
GTTGCTCGATCCATTAAGTACATACGAGCCCAAAGGCATTCATAATGGGG
GAGGGTTGCAGACTGCACCCAGTACCTTCCCTCAACATCCCCgatccttc
ccgcccacTCACCGCGAAACGGTCGTGCGGAaacagcagcggcggcggcg
tggGCGTCCATGCGAGGATGCTGCCCATCCTGCTTGGGCATGGCATGAAG
ATGAAGGTTTCGACTATTGCGAGGCTGGCGGggctgaggaaggggaaggg
acaggCGAGAATTCATACTGGGGCCACGCTGAAGAAgtagacgaggaggc
gaacaGGCGCGGGCGTGTTGCAGGATTGCTTGGCGGTGTGAAGCCCTGGA
CGGCCAGTCTTTACCATGGCCCTGGCCTGTTTTGTctgtggcgaaggagg
agagggaggtgggaaggaaagcccgGGGCCCTTGgtgtcgaggaagagga
agccaagggggcggaggtggaggaggggaaaatgaacgaagcggaagaag
caggaagggaggatgggcaaCCTCAGGAGGGGCCGCGGTGGGCGTGGCCA
GGcatgcggggagggggggagaaacgGGTCCGTTTCTCCCGAACCTCCGC
CTCGAGTCTGCCTGAgcggccctccgcctcgagtCTGCCTGAGCGGCCCT
CCGCCGCGTCCTGGCAGGCCTTGCAACGGATGTCAACCGTTTCCGTGGAC
TTTTTGAAGAAACAGGACCGGAGgcccgTGCAGATGGCCTGGGCCTTCTT
CGTCGTGTACGTGCTGGCCGGCCTCTGGTACTTCATGTTCTTCAAGGCCC
TCGACTTCCACAACGCCCTCTTCCAGATCATCAACAGCCTCAGCGCCGTC
GGGTACGGCTATTTTTCCCCCAGCACGCCCATCGAGCAGGCCCTGaccgt
cgtcttcctcttcgtcgggGTGGGCTTCATGGGCTCGCTCATCGGGatcg
tcgcctcctcccgcctggatttccaggaggacgtgaagaaggagtggCTG
GCccggcaggaagggaaggagggcgggggggatggcgggggggaggctct
ggaggaggaggaggaggaaccgGGCATGTCCCTGATGAGGATACAAATGC
AGCGGGCGCGGCAACGCGTGGTCTGGAATATTGCGCGAATCATGCTGGCG
ATCctggcggggacggtggTGCTGGTCCCACTCGAAGGGTGGACGTGGGG
GTAGATGGAGAGCGACCCACAGACGACGTTGCTCGATCCATTAAGTACAT
ACGAGCCCAAAGGCATTCATAATGGGGGAGGGTTGCAGACTGCACCCAGT
ACCTTCCCTCAACATCCCCgatccttcccgcccacTCACCGCGAAACGGT
CGTGCGGAaacagcagcggcggcggcgtggGCGTCCATGCGAGGATGCTG
CCCATCCTGCTTGGGCATGGCATGAAGATGAAGGTTTCGACTATTGCGAG
GCTGGCGGggctgaggaaggggaagggacaggCGAGAATTCATACTGGGG
CCACGCTGAAGAAgtagacgaggaggcgaacaGGCGCGGGCGTGTTGCAG
GATTGCTTGGCGGTGTGAAGCCCTGGACGGCCAGTCTTTACCATGGCCCT
GGCCTGTTTTGTctgtggcgaaggaggagagggaggtgggaaggaaagcc
cgGGGCCCTTGgtgtcgaggaagaggaagccaagggggcggaggtggagg
aggggaaaatgaacgaagcggaagaagcaggaagggaggatgggcaaCCT
CAGGAGGGGCCGCGGTGGGCGTGGCCAGGcatgcggggagggggggagaa
acgGGTCCGTTTCTCCCGAACCTCCGCCTCGAGTCTGCCTGAgcggccct
ccgcctcgagtCTGCCTGAGCGGCCCTCCGCCGCGTCCTGGCAGGCCTTG
CAACGGATGTCAACCGTTTCCGTGGACTTTTTGAAGAAACAGGACCGGAG
gcccgTGCAGATGGCCTGGGCCTTCTTCGTCGTGTACGTGCTGGCCGGCC
TCTGGTACTTCATGTTCTTCAAGGCCCTCGACTTCCACAACGCCCTCTTC
CAGATCATCAACAGCCTCAGCGCCGTCGGGTACGGCTATTTTTCCCCCAG
CACGCCCATCGAGCAGGCCCTGaccgtcgtcttcctcttcgtcgggGTGG
GCTTCATGGGCTCGCTCATCGGGatcgtcgcctcctcccgcctggatttc
caggaggacgtgaagaaggagtggCTGGCccggcaggaagggaaggaggg
cgggggggatggcgggggggaggctctggaggaggaggaggaggaaccgG
GCATGTCCCTGATGAGGATACAAATGCAGCGGGCGCGGCAACGCGTGGTC
TGGAATATTGCGCGAATCATGCTGGCGATCctggcggggacggtggTGCT
GGTCCCACTCGAAGGGTGGACGTGGGGGTAG back to top
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