rna8114, rna8114 (mRNA) Nannochloropsis gaditana

Overview
Namerna8114
Unique Namerna8114
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length483
Alignment locationKK037247.1:603252..604571 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100155g3.10230.mrna
Orig protein idgnl|cribi|Naga_100155g3.10230
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:603252..604571 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100155g3gene7858Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8114rna8114-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22589.1cds8090Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8114 ID=rna8114|Name=rna8114|organism=Nannochloropsis gaditana|type=mRNA|length=483bp
ATGGACTCGCAACAAGTCAAGCTTGTCAAGGTCAAGTCCGTAGAAGCTCG
CACAGGCAGCACAGGAAATGTCACGCAGGTGCGCGTGGAGGCCCTGTCCG
CGAGGGTGACGTCCTGTGCCTGTTGGAATGGGAGCGTGATGCCCGTCGTC
TCCGATAAATTGGCAGCTCTATGCGGTTGCACCCAAACCAACCATGGAGG
GTGCGAAGACTTTGCGAGTGAAGGTTTCCTTTCCTTCTCTTTCTCGTTGA
TTTGCTCGGACCGAGACTGTGGATATCACCACTCGTTGGGATGTGATAGG
GAAGAAAAGTGTAGTGGAAGGCCAGGGTTGTCAATCAGAAAAAGAAAGAA
GGAATGTCTCAGCTGCGGAGATAAAGAGTCTTTGTCAGGGCTCGTATTGC
TTTTTTGTCGAAAAAGACGCAATCTTGTTTTACGTTGGTCAAAGAGTCGA
ACCATAAAACATAATGAACGATTCGAAGGATGA
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protein sequence of rna8114

>rna8114-protein ID=rna8114-protein|Name=rna8114|organism=Nannochloropsis gaditana|type=polypeptide|length=341bp
MPTHLVSSFFRKTDGESMVADIPDCSTPVSSQSIVEAFDDKRCCPSSSCP
AVSPGAIGGREESAIDIVDEGKGWSNDDKEGGKPPTAQSNGARPRKCVDS
PQRVPAARGLKSRKVLRFVIYTGCLLTLFFLALLFAYLGMVATIPPPFIT
LQPSTLKHLAFDGPYMNAVVSLGAEIENKSNFQVTIQASTVLITYHQAAL
GMVQLPTMHLHPSRSFVHDTNATFYRVNTITGPTTPGKREREGEEGGEEG
GSATTPLGKRLMDEVLGKQSSTLKLEGHVSVRAHVVKRQGFPAVPINLRL
ACVFENQWGGRENRGEGGREEERDKYGAGCETTLHPFWWIP
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mRNA from alignment at KK037247.1:603252..604571-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8114 ID=rna8114|Name=rna8114|organism=Nannochloropsis gaditana|type=mRNA|length=1320bp|location=Sequence derived from alignment at KK037247.1:603252..604571- (Nannochloropsis gaditana)
ATGCCAACACATCTGGTTTCGTCGTTTTTCCGAAAAACTGATGGCGAATC
AATGGTGGCAGACATTCCTGACTGCTCGACTCCTGTGTCGAGTCAGAGCA
TAGTCGAAGCATTCGACGACAAAAGATGCTGTCCATCTTCATCTTGTCCT
GCTGTCTCGCCTGGGGCAATCGGTGGCAGAGAAGAGAGCGCAATCGACAT
AGTTGACGAAGGAAAAGGATGGAGCAACGACGACAAGGAAGGAGGAAAAC
CACCAACGGCCCAAAGCAATGGAGCCAGGCCCCGGAAATGCGTCGACTCA
CCGCAGAGAGTCCCAGCGGCTCGGGGTTTGAAGTCACGAAAAGTCTTGCG
CTTTGTCATCTATACGGGCTGTCTGCTCACCCTCTTCTTCCTGGCCCTGC
TCTTTGCCTATCTAGGGATGGTGGCGACGATACCGCGTGAGTATCTATTT
GCTGGGCCCAGACATTGGAATGAGTGAAAAGTGCAGTGGTAGTTGCATAT
ACTGCGGCAAACACTTTGCATCGACTTTGTGGCCCCATGCAACGCGCGTT
CATCTCTGCCCCCCTCCTTCCTTTCCTCTCTTCAGCTCCCTTCATCACGC
TACAACCTAGTACCTTGAAGCATTTGGCATTCGATGGTCCCTACATGAAC
GCCGTGGTCTCTCTGGGGGCAGAGATCGAGAACAAAAGCAACTTTCAAGT
CACAATCCAGGCCTCCACCGTCCTGATCACGTACCACCAGGCAGCCTTGG
GCATGGTGAGATGGAAAGGGTTCATGGGAAGGGCATGGTGGGGGGGTTGC
GGGGGTAAAGCGCTCAGAGGAGCAGGGTCGATGTCTCCTGGCAAAGTGAA
GTCTTTCTCTCTCCACAATTCCCCCCTTCCTCCTCTCTCCCCTTCCCCAG
GTCCAACTACCGACCATGCACCTGCATCCCTCCAGAAGTTTCGTCCACGA
CACCAACGCCACATTCTACCGCGTCAATACTATAACGGGTCCCACCACCC
CTGGGAAGAGGGAGCGGGAAGGGGAGGAAGGGGGGGAGGAAGGGGGTTCA
GCGACGACTCCCTTGGGGAAGAGACTTATGGACGAGGTACTGGGCAAGCA
ATCCTCCACCTTGAAGCTAGAGGGACATGTGAGCGTGAGGGCGCACGTGG
TGAAGCGCCAGGGGTTCCCGGCTGTCCCGATCAATCTCCGGCTGGCCTGT
GTGTTTGAGAACCAATGGGGAGGGAGGGAGAACCGAGGGGAGGGCGGGAG
GGAAGAAGAACGGGACAAATACGGGGCTGGCTGCGAGACGACGTTGCATC
CATTTTGGTGGATCCCATGA
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Coding sequence (CDS) from alignment at KK037247.1:603252..604571-

>rna8114 ID=rna8114|Name=rna8114|organism=Nannochloropsis gaditana|type=CDS|length=3078bp|location=Sequence derived from alignment at KK037247.1:603252..604571- (Nannochloropsis gaditana)
GTCCAACTACCGACCATGCACCTGCATCCCTCCAGAAGTTTCGTCCACGA
CACCAACGCCACATTCTACCGCGTCAATACTATAACGGGTCCCACCACCC
CTGGGAAGAGGGAGCGGGAAGGGGAGGAAGGGGGGGAGGAAGGGGGTTCA
GCGACGACTCCCTTGGGGAAGAGACTTATGGACGAGGTACTGGGCAAGCA
ATCCTCCACCTTGAAGCTAGAGGGACATGTGAGCGTGAGGGCGCACGTGG
TGAAGCGCCAGGGGTTCCCGGCTGTCCCGATCAATCTCCGGCTGGCCTGT
GTGTTTGAGAACCAATGGGGAGGGAGGGAGAACCGAGGGGAGGGCGGGAG
GGAAGAAGAACGGGACAAATACGGGGCTGGCTGCGAGACGACGTTGCATC
CATTTTGGTGGATCCCATGACTCCCTTCATCACGCTACAACCTAGTACCT
TGAAGCATTTGGCATTCGATGGTCCCTACATGAACGCCGTGGTCTCTCTG
GGGGCAGAGATCGAGAACAAAAGCAACTTTCAAGTCACAATCCAGGCCTC
CACCGTCCTGATCACGTACCACCAGGCAGCCTTGGGCATGATGCCAACAC
ATCTGGTTTCGTCGTTTTTCCGAAAAACTGATGGCGAATCAATGGTGGCA
GACATTCCTGACTGCTCGACTCCTGTGTCGAGTCAGAGCATAGTCGAAGC
ATTCGACGACAAAAGATGCTGTCCATCTTCATCTTGTCCTGCTGTCTCGC
CTGGGGCAATCGGTGGCAGAGAAGAGAGCGCAATCGACATAGTTGACGAA
GGAAAAGGATGGAGCAACGACGACAAGGAAGGAGGAAAACCACCAACGGC
CCAAAGCAATGGAGCCAGGCCCCGGAAATGCGTCGACTCACCGCAGAGAG
TCCCAGCGGCTCGGGGTTTGAAGTCACGAAAAGTCTTGCGCTTTGTCATC
TATACGGGCTGTCTGCTCACCCTCTTCTTCCTGGCCCTGCTCTTTGCCTA
TCTAGGGATGGTGGCGACGATACCGCGTCCAACTACCGACCATGCACCTG
CATCCCTCCAGAAGTTTCGTCCACGACACCAACGCCACATTCTACCGCGT
CAATACTATAACGGGTCCCACCACCCCTGGGAAGAGGGAGCGGGAAGGGG
AGGAAGGGGGGGAGGAAGGGGGTTCAGCGACGACTCCCTTGGGGAAGAGA
CTTATGGACGAGGTACTGGGCAAGCAATCCTCCACCTTGAAGCTAGAGGG
ACATGTGAGCGTGAGGGCGCACGTGGTGAAGCGCCAGGGGTTCCCGGCTG
TCCCGATCAATCTCCGGCTGGCCTGTGTGTTTGAGAACCAATGGGGAGGG
AGGGAGAACCGAGGGGAGGGCGGGAGGGAAGAAGAACGGGACAAATACGG
GGCTGGCTGCGAGACGACGTTGCATCCATTTTGGTGGATCCCATGACTCC
CTTCATCACGCTACAACCTAGTACCTTGAAGCATTTGGCATTCGATGGTC
CCTACATGAACGCCGTGGTCTCTCTGGGGGCAGAGATCGAGAACAAAAGC
AACTTTCAAGTCACAATCCAGGCCTCCACCGTCCTGATCACGTACCACCA
GGCAGCCTTGGGCATGATGCCAACACATCTGGTTTCGTCGTTTTTCCGAA
AAACTGATGGCGAATCAATGGTGGCAGACATTCCTGACTGCTCGACTCCT
GTGTCGAGTCAGAGCATAGTCGAAGCATTCGACGACAAAAGATGCTGTCC
ATCTTCATCTTGTCCTGCTGTCTCGCCTGGGGCAATCGGTGGCAGAGAAG
AGAGCGCAATCGACATAGTTGACGAAGGAAAAGGATGGAGCAACGACGAC
AAGGAAGGAGGAAAACCACCAACGGCCCAAAGCAATGGAGCCAGGCCCCG
GAAATGCGTCGACTCACCGCAGAGAGTCCCAGCGGCTCGGGGTTTGAAGT
CACGAAAAGTCTTGCGCTTTGTCATCTATACGGGCTGTCTGCTCACCCTC
TTCTTCCTGGCCCTGCTCTTTGCCTATCTAGGGATGGTGGCGACGATACC
GCGTCCAACTACCGACCATGCACCTGCATCCCTCCAGAAGTTTCGTCCAC
GACACCAACGCCACATTCTACCGCGTCAATACTATAACGGGTCCCACCAC
CCCTGGGAAGAGGGAGCGGGAAGGGGAGGAAGGGGGGGAGGAAGGGGGTT
CAGCGACGACTCCCTTGGGGAAGAGACTTATGGACGAGGTACTGGGCAAG
CAATCCTCCACCTTGAAGCTAGAGGGACATGTGAGCGTGAGGGCGCACGT
GGTGAAGCGCCAGGGGTTCCCGGCTGTCCCGATCAATCTCCGGCTGGCCT
GTGTGTTTGAGAACCAATGGGGAGGGAGGGAGAACCGAGGGGAGGGCGGG
AGGGAAGAAGAACGGGACAAATACGGGGCTGGCTGCGAGACGACGTTGCA
TCCATTTTGGTGGATCCCATGACTCCCTTCATCACGCTACAACCTAGTAC
CTTGAAGCATTTGGCATTCGATGGTCCCTACATGAACGCCGTGGTCTCTC
TGGGGGCAGAGATCGAGAACAAAAGCAACTTTCAAGTCACAATCCAGGCC
TCCACCGTCCTGATCACGTACCACCAGGCAGCCTTGGGCATGATGCCAAC
ACATCTGGTTTCGTCGTTTTTCCGAAAAACTGATGGCGAATCAATGGTGG
CAGACATTCCTGACTGCTCGACTCCTGTGTCGAGTCAGAGCATAGTCGAA
GCATTCGACGACAAAAGATGCTGTCCATCTTCATCTTGTCCTGCTGTCTC
GCCTGGGGCAATCGGTGGCAGAGAAGAGAGCGCAATCGACATAGTTGACG
AAGGAAAAGGATGGAGCAACGACGACAAGGAAGGAGGAAAACCACCAACG
GCCCAAAGCAATGGAGCCAGGCCCCGGAAATGCGTCGACTCACCGCAGAG
AGTCCCAGCGGCTCGGGGTTTGAAGTCACGAAAAGTCTTGCGCTTTGTCA
TCTATACGGGCTGTCTGCTCACCCTCTTCTTCCTGGCCCTGCTCTTTGCC
TATCTAGGGATGGTGGCGACGATACCGC
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Synonyms
Publications