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Properties
| Property Name | Value |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
| Orig transcript id | gnl|cribi|Naga_100017g2.338.mrna |
| Orig protein id | gnl|cribi|Naga_100017g2.338 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:475901..477880 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna811 ID=rna811|Name=rna811|organism=Nannochloropsis gaditana|type=mRNA|length=1346bp
AAACGAGGTCACCAACCCGCGCAACAACGTGCACCAAGAAAACAAAGGGA
GCATACTATGCCCGGGTCAAGAGATAACGACTGCCATTTTAAAATTGACA
AAGGGCTTTGATATTTCCGTAGGATTAGTTTTTCGTTCCAGCCACCCTAC
CTTTCGACATAGGATATCTTCTTTCCATACCCTGATACCAGCTCCTCTCT
CACCATTGCTTTCTGAATGCCCTGTTTTCTCGTTTTCCGCGCTTCCTCGT
ACAGTACGGGATCTCAATCCAATAAAAATCCCATGGAGCCTGGCCCTGGT
AAGCCGAGGCCTCTGCAAGGGGTTTGGGCCCAGCCACGGTCCAGACCCTC
GCCTCCGTCGTCAGAGCCCCCCTCCGCCTCTGCAAACAGTGGGCTAACCG
GCACCAAAATCGAGCTAAGCGATTTGTTTGGGGCTAGACCCAGCGTTCCT
CAATCGACTGGGACTGGCCAGGCCCCTCCGTTTCCTGTGCAGCCGCAGTA
TCTCCAGCATCACCCACCACCACAGGCGCAAGCCCCACCACACTATCCAC
AGACGACTCCCCCAATACAGTACCCTCCGCACCAAGTCCAAGCGCATGCG
TCTGCGCCCCATCAACTGGCCTTCCCGGCCTCGCACCCTTTTCACGCCCG
CCCCCACCCCATGCCGCCGGGCGCCATGACTATGCACGGCCGCCCACCCC
CGGGCCTCACGGGCAACGGCTTCGCCTCCCCCTCCGGCTCCCCCCCATCG
GCACCTCCCTTCCATCCCAACGCCCCTCCGCCCTTCCCACCGCAGCAAGC
GCAGCCCCTCCATCCATCAGCGCACATGCACCCTCCTCAATCCCTCGCGT
CCACGTCCACGGCTCCCGGTCCGCGTCCTCCGCAGCTCCAGCAGGAGCAA
CTGCAACAACTCCGTATGATGATGCACGCAGGTGGGGCACCGCAACCGGG
GCCTCACTACATGCTTCCTCCGCGGCCGTTCGTGGCGGTCCTCCCCGACT
ACCTCCCCGGGGCGGCCTCTCTGGTCGAGCAGTTGGACCGGCGGGTGCTG
GTGGTGTTGCGGGACGGTCGCAACCTCGTCGGGGTCATGCGGTCTTTCGA
CCAGTTCTCGAACATGGTCTTGGAGGACACCTACGAGCGGCACGTGGTGG
ACGGCAAGTATGGCGACTTGCCCCTGGGCCTGTATCTGGTCCGGGGGGAC
GCCGTGGTGCTCTTGGGAGAGGTGGAGGCGGAGCGGGAGGGGAAGAGCCT
GGAGAAGGTGACGACGGAGGAGATCCTCGAGCTCTTGCAGGGGTCGGGGG
AGGCGGGGGCCAAGTTAGAGTGGGATTTTGAATGAGGCGGGGAGGG back to topprotein sequence of rna811 >rna811-protein ID=rna811-protein|Name=rna811|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MSTMNSTSMSVNRPTTKVTHAPGGASSISIFGEPEQRPAAGGSGARPTFK
ASFEPSFETSAPPLPTSESVKKAVIEPVHAPPEDSAAGQALPLTQESDKT
SVATPADVPHSNVISSSKTAATTMNDCGISPNNTSAGVGIYVVFAATSHL
QTALKARTLEMAAAQGVPSGAVEVCDLLQLPLAAKRMAATEKYAAIIATA
AITEEDSFVAKEMAGAVANGLVQVSCATSVPVIPGLIIARSEAEVLAMME
EKPAAWVASALSFSQGLDPAVEVMDARGAAGAVEASFPAKTAEESAPDAI
NAPEKEVITAPSFTEPVGEASLGVIAKATAAFVPSEGNAPPRRPNHRGAG
PSSIVFG back to topmRNA from alignment at CM002456.1:475901..477880+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna811 ID=rna811|Name=rna811|organism=Nannochloropsis gaditana|type=mRNA|length=1980bp|location=Sequence derived from alignment at CM002456.1:475901..477880+ (Nannochloropsis gaditana)
TACCTCTCTTGGGAAATGTGAGACGCACGATCAATTGCGAAAAATGTCAG
AAGCCCGCATGTACCGCAATACCTCATTTTGGCCAACATGTCATGGGGCT
TAGCCGCTCCCTGTCAGGGATATTTTCAAAAATGGACGCGGGAAGCCGAC
CGACCACCTTCTCTACGGCGTCAATGCCAGTTAAGGCCAAAAACAATATT
AGGTTGAAAATTATAGCGCCATTAATTCTACTATATAGGAGTTATAAGAT
TTATATCGCTCGTTTGTGCCATTGCTGGTTCTGCAGTTCTTCACCAGTCG
ACCAAGGAagagccttcccccccgccttcctctgtAGAACGCTATACGTA
CCTTACTGTCAAGAAGGCATCAGTTTCGCAAGCGTATTGGTGCCAAACTG
CCATCGAAACAAAATTGTGTCCTTTCACATGACATGTCTGACTCCCATTA
TTTCTAACTTTTTCACAAGTCAGCAGCCCGAGCATCTTTGACTTTCTTTG
CCGAGGTCATGTCGACGATGAATAGCACCTCAATGAGCGTCAACCGACCC
ACCACCAAGGTCACTCACGCGCCGGGAGGCGCATCATCTATCTCCATCTT
CGGAGAACCTGAGCAGAGGCCTGCAGCGGGCGGGTCCGGGGCAAGGCCGA
CCTTCAAGGCGAGCTTTGAACCCTCTTTTGAGACTTCAGCACCGCCTCTA
CCCACGTCTGAATCCGTGAAAAAGGCAGTCATCGAGCCCGTCCATGCTCC
TCCGGAGGACTCCGCGGCTGGGCAGGCTCTGCCTCTCACGCAGGAGTCAG
ACAAGACCTCTGTCGCCACTCCTGCTGATGTCCCACATTCCAACGTGATA
TCGTCGAGCAAGACTGCAGCCACGACGATGAATGACTGTGGCATCTCCCC
TAATAATACCTCTGCGGGCGTGGGTATATACGTTGTCTTCGCTGCGACGA
GTCACCTCCAAACCGCGCTGAAAGCTCGGACCTTGGAAATGGCAGCGGCC
CAGGGTGTCCCCTCTGGCGCCGTGGAGGTGTGCGACCTGCTACAATTGCC
TTTGGCTGCTAAACGCATGGCTGCCACCGAAAAATATGCGGCAATCATTG
CCACGGCAGCCATAACGGAAGAAGATTCGTtcgtggccaaggagatggcg
ggcGCGGTCGCGAACGGCTTGGTGCAGGTGTCGTGTGCCACGTCTGTCCC
CGTCATCCCGGGCCTCATTATCGCGCGCTCGGAGGCTGAGGTTCTAGCca
tgatggaggaaaagcctGCGGCTTGGGTGGCCTCGGCCTTGTCCTTCAGT
CAGGGCCTGGACCCCGCAGTCGAGGTCATGGACGCTCGGGGGGCGGCTGG
GGCGGTCGAGGCGTCCTTCCCCGCAAAAACCGCCGAGGAATCAGCGCCGG
ACGCCATCAACGCTCCCGAGAAGGAAGTGATTACCGCGCCCAGCTTCACA
GAACCGGTGGGAGAGGCCTCTCTTGGCGTCATAGCCAAAGCGACCGCTGC
CTTTGTTCCTTCCGAGGGGAATGCCCCGCCTCGCCGACCCAACCATCGCG
GTGCAGGACCGAGCTCCATCGTCTTTGGCTAATGCGATCGTACCAGGGTG
CAAGCCGCGTACGTTGCAGGCGAAATTCACAATATGGTTGATGACaagaa
tgaaaaaaaaaagtaaCGAatgtgaaaaagaaggggaacACCGGCGGACG
ACGCAGTCAAGCAATGGCAGCCTGGTCGCTTGCCTGAGccacgaggagaa
ggtcaCCCAGCACTTGCTTTGTACCGCTCTAAAATCTATACATATCGTAA
GCGCATAGAGGATGGTGAGAgttgggggaaaagaagtggATACACCGCGG
AAGTTTTCGGTCGAGACGGCATAGTAACAAGTTGCGCTGATTTCCGAATC
AGATACCGCAGAAAAGAAAGTGTAAGCAAACATGAAAGCACTTTGCACCA
CCACCGTGGCAAGCTCGCGTTTCTATGATT back to topCoding sequence (CDS) from alignment at CM002456.1:475901..477880+ >rna811 ID=rna811|Name=rna811|organism=Nannochloropsis gaditana|type=CDS|length=1074bp|location=Sequence derived from alignment at CM002456.1:475901..477880+ (Nannochloropsis gaditana)
ATGTCGACGATGAATAGCACCTCAATGAGCGTCAACCGACCCACCACCAA
GGTCACTCACGCGCCGGGAGGCGCATCATCTATCTCCATCTTCGGAGAAC
CTGAGCAGAGGCCTGCAGCGGGCGGGTCCGGGGCAAGGCCGACCTTCAAG
GCGAGCTTTGAACCCTCTTTTGAGACTTCAGCACCGCCTCTACCCACGTC
TGAATCCGTGAAAAAGGCAGTCATCGAGCCCGTCCATGCTCCTCCGGAGG
ACTCCGCGGCTGGGCAGGCTCTGCCTCTCACGCAGGAGTCAGACAAGACC
TCTGTCGCCACTCCTGCTGATGTCCCACATTCCAACGTGATATCGTCGAG
CAAGACTGCAGCCACGACGATGAATGACTGTGGCATCTCCCCTAATAATA
CCTCTGCGGGCGTGGGTATATACGTTGTCTTCGCTGCGACGAGTCACCTC
CAAACCGCGCTGAAAGCTCGGACCTTGGAAATGGCAGCGGCCCAGGGTGT
CCCCTCTGGCGCCGTGGAGGTGTGCGACCTGCTACAATTGCCTTTGGCTG
CTAAACGCATGGCTGCCACCGAAAAATATGCGGCAATCATTGCCACGGCA
GCCATAACGGAAGAAGATTCGTtcgtggccaaggagatggcgggcGCGGT
CGCGAACGGCTTGGTGCAGGTGTCGTGTGCCACGTCTGTCCCCGTCATCC
CGGGCCTCATTATCGCGCGCTCGGAGGCTGAGGTTCTAGCcatgatggag
gaaaagcctGCGGCTTGGGTGGCCTCGGCCTTGTCCTTCAGTCAGGGCCT
GGACCCCGCAGTCGAGGTCATGGACGCTCGGGGGGCGGCTGGGGCGGTCG
AGGCGTCCTTCCCCGCAAAAACCGCCGAGGAATCAGCGCCGGACGCCATC
AACGCTCCCGAGAAGGAAGTGATTACCGCGCCCAGCTTCACAGAACCGGT
GGGAGAGGCCTCTCTTGGCGTCATAGCCAAAGCGACCGCTGCCTTTGTTC
CTTCCGAGGGGAATGCCCCGCCTCGCCGACCCAACCATCGCGGTGCAGGA
CCGAGCTCCATCGTCTTTGGCTAA back to top
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