EWM29840.1, cds811 (CDS) Nannochloropsis gaditana

Overview
NameEWM29840.1
Unique Namecds811
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:476409..477482 +

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Properties
Property NameValue
Protein idEWM29840.1
Product6,7-dimethyl-8-ribityllumazine synthase
Orig transcript idgnl|cribi|Naga_100017g2.338.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:476409..477482 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0009231riboflavin biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
GO:0009349riboflavin synthase complex
Vocabulary: INTERPRO
TermDefinition
IPR002180DMRL_synthase
Homology
[Close]
BLAST of EWM29840.1 vs. NCBI_GenBank
Match: gi|585112421|gb|EWM29840.1| (6,7-dimethyl-8-ribityllumazine synthase [Nannochloropsis gaditana])

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0 
Query:    1 MSTMNSTSMSVNRPTTKVTHAPGGASSISIFGEPEQRPAAGGSGARPTFKASFEPSFETSAPPLPTSESVKKAVIEPVHAPPEDSAAGQALPLTQESDKTSVATPADVPHSNVISSSKTAATTMNDCGISPNNTSAGVGIYVVFAATSHLQTALKARTLEMAAAQGVPSGAVEVCDLLQLPLAAKRMAATEKYAAIIATAAITEEDSFVAKEMAGAVANGLVQVSCATSVPVIPGLIIARSEAEVLAMMEEKPAAWVASALSFSQGLDPAVEVMDARGAAGAVEASFPAKTAEESAPDAINAPEKEVITAPSFTEPVGEASLGVIAKATAAFVPSEGNAPPRRPNHRGAGPSSIVFG 357
            MSTMNSTSMSVNRPTTKVTHAPGGASSISIFGEPEQRPAAGGSGARPTFKASFEPSFETSAPPLPTSESVKKAVIEPVHAPPEDSAAGQALPLTQESDKTSVATPADVPHSNVISSSKTAATTMNDCGISPNNTSAGVGIYVVFAATSHLQTALKARTLEMAAAQGVPSGAVEVCDLLQLPLAAKRMAATEKYAAIIATAAITEEDSFVAKEMAGAVANGLVQVSCATSVPVIPGLIIARSEAEVLAMMEEKPAAWVASALSFSQGLDPAVEVMDARGAAGAVEASFPAKTAEESAPDAINAPEKEVITAPSFTEPVGEASLGVIAKATAAFVPSEGNAPPRRPNHRGAGPSSIVFG
Sbjct:    1 MSTMNSTSMSVNRPTTKVTHAPGGASSISIFGEPEQRPAAGGSGARPTFKASFEPSFETSAPPLPTSESVKKAVIEPVHAPPEDSAAGQALPLTQESDKTSVATPADVPHSNVISSSKTAATTMNDCGISPNNTSAGVGIYVVFAATSHLQTALKARTLEMAAAQGVPSGAVEVCDLLQLPLAAKRMAATEKYAAIIATAAITEEDSFVAKEMAGAVANGLVQVSCATSVPVIPGLIIARSEAEVLAMMEEKPAAWVASALSFSQGLDPAVEVMDARGAAGAVEASFPAKTAEESAPDAINAPEKEVITAPSFTEPVGEASLGVIAKATAAFVPSEGNAPPRRPNHRGAGPSSIVFG 357
The following BLAST results are available for this feature:
BLAST of EWM29840.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112421|gb|EWM29840.1|0.000e+0100.006,7-dimethyl-8-ribityllumazine synthase [Nannochlo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna811rna811Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications