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Properties
| Property Name | Value |
|---|
| Product | transcription initiation factor tfiid subunit 13 |
| Orig transcript id | gnl|cribi|Naga_100155g10.10225.mrna |
| Orig protein id | gnl|cribi|Naga_100155g10.10225 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:588323..589333 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8107 ID=rna8107|Name=rna8107|organism=Nannochloropsis gaditana|type=mRNA|length=4939bp
CTTCTCCTCCTCCGACATTGCATCTCAATTTTCGTCATTTCCCTCCCTTT
TCACACCACAAACAGGGTCGCCAGATTATTCATACGTCCTGGTTTCCGTT
GGTGGGGAGAGATCAGTGCACCGCAGAGTGGTGTCCTGTCTGACGCCGTG
CCAGTAAGAGGGGAGCTTCCTAGGCTCAGCGTGCCCGCCCGTGTGTTCCC
CCTTGGAGGGCATCACGCGAGATCCCACCAGTGTACCATACCTCATCATC
ACTTCTACATCCGCACTGTGCGCGGTACTTCGTGACTGCTTCTTTCTCCT
TCGGTGGACTTTATCATCGTGAGCTACATCCTGGTATTTCGGGACATAGT
TTCTCCCTTCCCTTAAGAGGGCTCCCGCAAGCATCACGTTGCACGTCCTC
GCACCTTTTCCTTCCATCCTTGAGAACGAAAATCTGCGAAACGTTGCACT
TCGTGCCCTTTCGTGCCGTCCGCGTCCTCCACGACGCCTTCCTCCCGCTG
CTCCCAATTTCTCGGTCTTCCGGCTTTTCCATGCCCAAGGATTGCTCGGT
TCTCAAGGTCGGGAGCACTCTCGGGAGCCCTCGTGCCGCTGGATTGAGCA
CACCACGGAGGGATGCATCGCCATCCTCCGTGGCTGCGGCGCATCTCAGT
AGGAGGCTTGGGGCGTACTCACTCTCGACCACAGTCAACAGCACCGTCCC
CCCTCCTTCGGTGTTGCGCCGGGGCGTCTTTCCTCCCTCTAGCCCGTTAC
CTGCCACGTCTGTATATCCCACGACGCCCTCCTATGCCAAGTCTCCGTCT
TCTGGCACCTGCTGCGCCGTGTCCTCCCCCCCCTTCGCCTCCGCCGTCAT
GAAGGCCCCCCTCCTTTCCAGCCACCTCTCCATGCACTCCCAATCCGGGC
ATTGCCACCCTACCTCTTGCCCTGCTTCCTCTACTGGCTCCTCTAGCTAC
CTGATCGACCATCGTCTCTCGTTTTCGGCTGCCTCAATCGCCTGCCCGGA
GGAAGCTGCGAGACTTATTCCCCCCCCCTCGGAGACTGACAAGCCCGCTC
GGCACCACGTCCTCCCTCCGCCGTTCCCACCGCTTCCTGTCTCCACCTCC
CCTGCTTCACTTCCATTTTTTCCTTCGTGCCCGTTTCCTGCTTCTCTTCC
TTTTCCTGCGACGGTCGAGGCCTCGCCCATCAACTGTGGCGGCCAGGACC
TCGGGCTTCTTTCCAAGCGCGTGAGAGCGATGGAGGACCTCCAGCCCCTC
CCGCACCTTCCCACCCCTCCCACCGCCCTCTCCGCCTCCACTTCCTCTCT
GTTTCGACGCCCCTGTCGACCCAAGGTCCAGCTCGCCATCCCTGCTTCCT
GCCGCTCCCAGTACCCCTCGGCTCGGCTGCTCAAGTACCTGACCGCCGAC
GTTGAGAAAGGGCTGGTTGCGGGCAACGAGTTAATCATGGCGGAGCTCTC
CTGCTCGGGGGCCTACTTCTGTCGGAACGCATCGGGGAGGCTGGTGGGGG
TCTTCAAGCCTATGGACGAGGAGCCTTACGCGGTCAACAACCCTCGCCTC
GAGTACAGGCCCCGGGCGAAAGGGAACGGGGAGAGGGGTGGCCGGGACTC
TGGAAGGAGGGAAGGCTTGAAAGCGGGAGTGGCTCCTGGAAAGGCGGCGG
TGAGGGAGGCCGCTGCCTTTGTCTTGGACGAAGGCTTTGCCGGCGTGCCT
GCCACGGCCTTGGCTTCCTTGCGCAGGTCACGCACCGAGGAATCGATGAG
CCTCGAGCCCCTCCAGCCGTTCCACCACCTCTCTCCACCGCCCCTGCGCA
AGACGGGAAGTGTGGGAGAGGTGGACAGGGTGAAGGTCGGCTCCCTGCAG
CAGTACGTGAGGCATGTTGGGTGCGCGGACGATTATGGGCCGGGGAGGTT
TGCCGAGGAAGACGTGCAACGCGTGGCTTTGCTCGACTTGAGGCTTCTGA
ACAGTGATAGGAACGCCGGCAATATCTTGGTGGCGCCCCCAGATATGCTA
TTGCCGGGAGGAGAGATGGATGGGAGGGGCGGTGGAGGAAAGGGGGGGGC
GCGAGGAGGCAGTGACACTGGTGGGCTGTCTGAAATGTTGGTGTGCCGGG
GTCCTTCTTTTGCCTCCGCCTCGACCAAGCCCTCTCCCTTGTTCGTGGCT
GCCGTCGAAAAGACCCAAGAGCAGCAGCAGCGGGACGAGCTCCCACCCCA
TGCGGACAGAGTGGACCTCCGCGGGCTTCCACCCTCTCCTCCTTTTTCGC
CCCCTCCCCCCCATGCCGACCCCTGCGCCCGCTCCCTGGACCTCGCGATG
GACAAGAGCGGCCCCCTATCTCCCATGGGACTCCGTCGAACACAGTCGGT
AGATGTGCTGGAAAGAGAGGAGGGCACGCTCTTGGCTCGTCGTCCGTCCA
TACGCTCCCATCCTGTCTCCCTGTCCCTCTCGTCTTCTGCCTCCCTCAGC
TCTCCCCACTCCACGCCCTCGCGCCCGTCCTGGGCCTCTACCTCCCCCTA
CCGGGCGCTCATTCGTCACCGCCGACTGCTAGATACTACTGGAAGGAAGA
AGACAAAGAGACGCGAACCTTTCTCCGAAGAGTCGGCATCCGGGATTGAG
GGAGAGGAGAGAGAAGACGGGGCGAGCCCTTTATGTCTCGTGCCCATCGA
CCATGGGTTTTGCCTGCCTCACCCTCTGCTGATGGACGATGTAGAAGTGT
GCTGGGTCAATTGGGAGGCTGCCAAGGCGCCCCTACTTCCCTCGTTGCGG
CAGCTCCTGTCCACTTTGAATGTGGAGGATGACATTGCGCGCCTCAAGGC
TTGCCTGGGCGATGTGGCCGTTGAAGGGGAAGGACTGCCTCCCGCATGCT
TTTTGACTTTGCGCATCGGCACAGCTTTGTTGCAAGAAGGATTGCTGGTG
AGGCGAGGACCGGGACAAGGCGGGGAGGGGGAAGGGGAGGAGAGTGCTGA
GCAGGCGTTTCCCCTGACGTTGCACGACCTGGCGTTGTTGGTAACGCGGG
AAGACCCCGAGTGCCCGTCGGAGCTTGAGCAAGCGGTAAGGGACAGCTAC
GAGGCGCTAGTTGCGGAGGTCTCAGACGACCTGTTACCCTCCCGTCCCGT
TGCCTGGCTTCCATGGGAGAAAAGTTTGATAGAAGACGAGCGATTCCACC
CGCGGTTCATGGAGCTATTCAAACCGAGGTTGCGAGCAGTCCTGGACAAA
GCGGCGGAGGGTAAGGTGAACGGAAGGAAGCCAGGATTCACACAGGCAGC
CGGTGGAAGGACTTGGTAGCTTTGATGTGATGTATGTACCATGACGCTAT
CTATTGTCGTGAAGTGCGTCAGTATTCTACTGTAAAATGTATTGATATAG
TGGAGAGATAGATATTGTATACTGAGGTGCAGTTGTTACTGTCTTGAAGC
CACACAAAGTATATCTTGGGAGGCATTTGCGTGGTGACTGCAGAACCGTT
GAGGTCTACGTGTGTGCCCGCCAGAGTGCAGATATATTGATTTGTCAATG
AGAGCGTCCTTGGATAAGAAAGATGGATACTGGAGTTGCACGTATTCTGG
TCATTGCCACGTGTGATTTGCGGCCAGATGAGTATAAGTTGTCGAGGTAT
TGATGCGTTTGTGATCATGAAAGCATGAGGATGGACAGAGGAGGGGCGAG
GAGATACCCTACAGGCATTCAAATCGCCATAACAGGGGACATGAAGGATC
ACAACAATGAGGATAATGAATGCCAGTATGTAAAGAGAGTTGTAATGATA
ACCAGACAGTGTTTACAAACAAATATGGTGTGAGTACTGAACAATGATAC
TACTCCAATGCACGACGGAGGTAGAGCAGTGTTGACCAGGAGCACGTAAT
ATGTTCATAAAACAGGAGAGAGAGAGACAGACGAGGAAGTTATCAGATTG
GCGCTTGGCTCGAACGCTTACAATAGGTCAAAAAGGCAGGAAAATAAATA
TCAGGAGGCCAGCAATGCCTGTGATCCCTCCTTGAGTCGATCAGATGGTA
TACAATAGAGGTAGAAGGGAAGATGTGCATTCTCTGAGGGAGCGTTCAAA
GTACAAACCCTTGTATTCGGCTGGATTTTTTTTGGGGGGGGAGTATTCCG
TATGTGGTCTCGGGTCGGAGACATTGACGAGCTGACAGTCGCACAGGGGG
TACCCTCCTGGTAAGCATGCTTTCTCTACTGCGTCCGCGAAAGTATAGTT
TGGGATTCGACTCGATGGTAATTCAAAGGAAGTCCTCGTTGCATACATAT
ATTTGGGAATCAGCTTGACCATGAAAATGTCCCAAACATTTTCGTCATGG
AACTAGGGAATCAGTTTGATCACGAACATATTCTCGCCTTGAGCAGTAAG
AGTGGTATCACCCACTGTCATGCTTCCTCGGAATAGACCGGTGGTGTAGG
AGCTGCCCGATGCATCCACAGCAATGCCGTATCCGGTGTCTGTACTGCTG
CCTCCGAAGTTCTGAGCCCACACAGGGTTGCCACTGGGGTCCAGCTTGAT
CATGAAAACGTCTCTGCCACCAACAGCCGTGAGAGATGTGGTACCCACTG
CCATGCTTCCTGAAAATTCACCGGTCGTGTAGGAAATACCCGATGCATCC
AAGAAAATTCCGCGTCCGGCGTCATTAGTGCTACCTCCAATGTTTTTAGC
CCATACAGGGCTGCCACTGGGGTCCAGCTTGATCATGAAAACGTCTCTGA
TACCAACGGGCGCGAGAGTAGCGCTACCCACCGTCACTCTTTTATAAGCA
TCGAATGATGGCGTTTCAGGGCAGACCGGGAGCAGAACAGCACCTACAAT
ACCCTGGGACACAAAAGATTAATAAATTATGAATCTATGGTAGGTTTTAT
CAAAGGAATTTATCATGCGCAATACCTTAAGCAACATGTGAAACCGATGC
ATTGGTAAAAACAGAAAAGAAAATCATAACCCTCGTAAA back to topprotein sequence of rna8107 >rna8107-protein ID=rna8107-protein|Name=rna8107|organism=Nannochloropsis gaditana|type=polypeptide|length=120bp
MAGRNAHSSSSIPPQAVAASKQGKGLRNDLVKMVYGYGDEKQPMQESVDL
LDDLVKEYLEEMCRQACEVARLGRRDVQTSDFIFLIRKDGRRYKRMKDLL
EADEELRDARDPKVKKMTET back to topmRNA from alignment at KK037247.1:588323..589333+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8107 ID=rna8107|Name=rna8107|organism=Nannochloropsis gaditana|type=mRNA|length=1011bp|location=Sequence derived from alignment at KK037247.1:588323..589333+ (Nannochloropsis gaditana)
AAAGTTGTATGAATGGATTCGAGCCGACTGAATGGAGACGATAAATGATA
AGAGAAGAAGCTTCGCCATTATCGCGCCCGATCATAAGTCTTCGCAGTCC
TGTTTCAGATTGCAGCGTTACGAGAGGAAAATGACCAAGAGGCTAAGTCG
CACAAGCCTGTCAGATTGCAGACGTACAGTGGGAGCCCCTGGTGTTGGTC
TCACCGTCGGCGTGCACGAAACTCTTACAGATCCACACAAGCGATAGGTG
CGAACAGGGTATGGCCGGCCGGAATGCCCACTCTTCGTCGTCAATCCCTC
CCCAGGCTGTGGCTGCTTccaagcaaggaaaaggcctACGAAATGATCTC
GTAAAAATGGTCTACGGATACGGAGACGAGAAACAACCAATGCAGGAGTC
CGTAGATCTCTTAGATGATTTAGTGAAGGAGTACCTCGAGGAGATGTGCC
GCCAGGTACGTCGTTTGGGTGGACTTAGCTGTGAGAGAGACGGGGATAAC
AAGAGGGAAGTTTTCCGTCCCCGACGAAGTGGGTTTGATGTCGACCCTTG
AACGTTTGCGTGCCGTTTATTTTATTTCATACATACAAGATGCTTATTAC
CAACGGACGTGGATCCTTCTGACCTTAATCTTTAAATTCTCGTAACCCCC
AGGCCTGCGAGGTCGCCCGCCTCGGCCGGCGAGATGTCCAGACAAGCGAT
TTCATTTTTCTGATCAGGAAAGACGGCCGACGGTACAAACGGATGAAAGA
TTTGCTGGAAGCTGACGAAGAGCTGCGGGACGCCAGAGACCCCAAAGTGA
AAAAAATGACAGAGACTTAGGCGAAAAAACAGGAGAGGCGTGCAGCAAGA
AATTTAGAGGTTTTTTCCAGGGGCAACTCAGCTTTTGTACAGCTACTTGG
AGCAAAATAATCTATAATGTGGAAATGCCACAACTATGAATGTAAGGATG
CGGCGAGTAAATATTTCAAAAAGAAGTGTGTCGCGCGAGACGTCTATAAA
CCACACAATGG back to topCoding sequence (CDS) from alignment at KK037247.1:588323..589333+ >rna8107 ID=rna8107|Name=rna8107|organism=Nannochloropsis gaditana|type=CDS|length=726bp|location=Sequence derived from alignment at KK037247.1:588323..589333+ (Nannochloropsis gaditana)
ATGGCCGGCCGGAATGCCCACTCTTCGTCGTCAATCCCTCCCCAGGCTGT
GGCTGCTTccaagcaaggaaaaggcctACGAAATGATCTCGTAAAAATGG
TCTACGGATACGGAGACGAGAAACAACCAATGCAGGAGTCCGTAGATCTC
TTAGATGATTTAGTGAAGGAGTACCTCGAGGAGATGTGCCGCCAGGCCTG
CGAGGTCGCCCGCCTCGGCCGGCGAGATGTCCAGACAAGCGATTTCATTT
TTCTGATCAGGAAAGACGGCCGACGGTACAAACGGATGAAAGATTTGCTG
GAAGCTGACGAAGAGCTGCGGGACGCCAGAGACCCCAAAGTGAAAAAAAT
GACAGAGACTTAGATGGCCGGCCGGAATGCCCACTCTTCGTCGTCAATCC
CTCCCCAGGCTGTGGCTGCTTccaagcaaggaaaaggcctACGAAATGAT
CTCGTAAAAATGGTCTACGGATACGGAGACGAGAAACAACCAATGCAGGA
GTCCGTAGATCTCTTAGATGATTTAGTGAAGGAGTACCTCGAGGAGATGT
GCCGCCAGGCCTGCGAGGTCGCCCGCCTCGGCCGGCGAGATGTCCAGACA
AGCGATTTCATTTTTCTGATCAGGAAAGACGGCCGACGGTACAAACGGAT
GAAAGATTTGCTGGAAGCTGACGAAGAGCTGCGGGACGCCAGAGACCCCA
AAGTGAAAAAAATGACAGAGACTTAG back to top
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