|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100126g22.3028.mrna |
| Orig protein id | gnl|cribi|Naga_100126g22.3028 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:528658..532265 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8085 ID=rna8085|Name=rna8085|organism=Nannochloropsis gaditana|type=mRNA|length=2192bp
ACGAAATCACACTTCCATCACACACACAGCACAGACAACCTTTAGACTGC
CACCATGAAGGCCACAGCAGCAGCCACGGCGATGTTGCTGTTGCCGCAGG
CGGCCCTTAGCCACTCTTCTCCACTGTACACATCATTTTCTGGTCCCCGT
GCCCACTTTCCGGCCACTTTCCTGGCCACAGTACCGTCCCACACCCTCAG
CAACACCAAGCGCCCTCCTATCCTCAACCAACGCCGACGCGTCGCTGTGA
TTCGAGGCGGAGCGGCCGTCACCGCTGAGGGTAGTTTTCAAGTTCCACCA
GCAGGCACAGAGAGCGGGGATGGAAACAAGGGCTCCTCCGTCTCGACAGC
CACCTTCAATCTCATCAAAAACATCCTTGGTGCCGGCGTCCTCTCCCTCC
CTTCCGGCGTGGGAGCTTTTTCCAGCAACCCTATGGCGTTGGTCCCCGCC
GTCGCCCTCACCATGGGGATGGGCTCGCTCTCCGCTTACTGCTTCACGCT
GATCGCACGGGTCTGTGCTCTTAACAAAGTGGAAACATACGGGGAGGCCT
GGGAGAAGTCCGTGGGGAAGAAAACCGCTTGGATGGTCCCCGCCGCCTGC
ACCTTCAAGACTTTCTGCGCCTGCACGGCCTTCAGCATCATCATCGCCGA
CTCCTTCTCCTCGCTCTTCGGGGCCACGCCGGGCTTTCCCGCCTTGTTGG
CGCAGCGGACGAACGTGATCGTTTGGATGACCTCCCTGGTTCTCCTTCCC
CTCTGCATGCTCAAGAGCTTCGCGCCCCTCGCCCCCTTCTCCCTGCTCGG
CATCCTCGGCACTGTCTTCACGGGCGCCGTGATCGCACTGAGGCTGCTGG
ACGGATCCTACGCGCCGGGGGGCCAGTTCCATGAGGCCATTGCCGCTTCC
CTTCGCCCCTCTCTGCTCTCAGGGTCGTCCTCCCCTCTCTTGAGCCCGAT
GGTCTTCGTCCTCGTCTCCATGCTCTCCACCTCCTTTATCGCGCACTACA
ACGCCCCGAAGTTTTACACGGAGCTGGAGAATCGCTCCATTCCCAAGCTC
AACAAAGTGGTGCAGAACTCCTTCAACTTTTGTACCGCCGCTTTTGCCTT
CATCATGGGATGCGGCTACCTGACCTTCGGAGGGGCGAGCCAGGGGCTGA
TACTTAACAATTACGCCGAGCAGGACGTGCTGGCGAAGATGTGCCGGTTG
GCGATTGGGGCGAGCATCGTCTTCGGCTACCCTTTGACCTTCGTGGGCAT
CCGCGACGGGGTCTTGAGTCTCCTGGGACGCAAGGCGCCCAGCACCAGGA
CTCAGACAGTGACCACGCTGGTCCTTCTGGCTGTCGTCAGCACGCTCGCG
GTCTTTTTGCGGGACGTGGGCTTCGTGGTATCCCTGGGGGGGGCCTTGTT
GGGCTCCTGCATCATCTACATCTTTCCTGCCATCATCTTCATCAAGACGA
TGGCGCAAAAGGTGGCAACAGGGGAGGTTGTTGAGACGCCGGCTGTAAAG
AGGGAGGTGCTGCTGAACAAGGGCATTACGGCTCTGGGCGTGCTCTTGGC
GATTATCGGGGCCACTGTATCGGTCTTGAAGGCCTTTATTCTCAAGTAAG
TGGTTTCAGCCTGAGGATTGGCGTGTACGAGTGACGGCAGAATTTGTGCA
AAGGGGGAAAAGAACACGACCGCGTCGATGATTGAAAAGACGCATGCGCT
GTGGAAACGAGACGGTTGGATGCGTACAACGGAGGGAGGGTGTGGCAGAA
CGGAATGGTAATTCATGTTTGGTGATATAAAATAAATAGACGGAGTGAGC
ACACAGAGCCGAAGGTTGAAGGAGGGAAAAGCATGGCACTTTATTTTCTC
TCCCGTGAGGCATCTTAGAACAGCTGGGGAGTACCTCGAAAGGCGGAAAC
ATTTTGAGTGGGAATGAAAAAGGGTATTAAAAGGTAGTACCGAGTGATAA
ACGTACATCTAGAGGAGGGCTAGGCGCAAACATCATGATAAAGGACGTCA
AAACGGGTTGGAAAAGGAACTGAATGTTTGCAGATAAAAATAAATCACTT
GAAGAAGATGGTTCGTCAAAGGCAGGATGGAAAACTTCAAAGTGACGATA
CACCGCATCTTTTAAAATCTTATGCGTTTTTTCGTAGGCTCATTCTACTA
TCGTGCCTCAACCTGTTATGTCTTTCAAGGGAATATCAAGCT back to topprotein sequence of rna8085 >rna8085-protein ID=rna8085-protein|Name=rna8085|organism=Nannochloropsis gaditana|type=polypeptide|length=596bp
MVRYLSGNGAVFHHAQLRRSVSASDSPSCTAADQKKETCPGGILPPPFPG
RSATIASNTSTSSSPSIATTDTGLSHLNLSLLGGSVSSSHLVGGQASPYM
RQARKDSLGSSISSMGGSEGGSPRVTRAECENCGYVFLCAYSKGGSTYCS
LDCRTTHNLYGVEDAFNHMVTGTSLDAAAHSFSVTPQRQAVYAHRPPPRQ
PLPGPQGSSEAPRARMDAARSVVRQSENKQNAAAHEDVNMGAGTGVCPSG
VGGGGGRTQTEAVHGRARRPVRWPLRPKRRKHPPPLEPRAEGREGAHSAM
TTAGLRRPHEGLPSEEEMATPALASDLKCSRGQGLTDPPAPAPMPPHPRP
PLSPPSSPLFLHPVAVPRPRPAACATPLEMIMPCLSSFSTSGGEESAAAG
DGQGQSSHPSYPQAFPRPLPPPTAAIRSRAPGSKSDEGSPLPFDTAHIAS
LERRRHAALHSHHPEHSGEERGRQGHGGRRKPGRIASTRPDEGSLKRETP
RGSPSFTSSSASSSSSPSPSSSSSPQPRTRPVPLPRCTRLPSERELGEAC
RVQQWQQQQQQELDQRPTGLQGKQSLEASVKADSAFERSGTAIRTV back to topmRNA from alignment at KK037247.1:528658..532265+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8085 ID=rna8085|Name=rna8085|organism=Nannochloropsis gaditana|type=mRNA|length=3608bp|location=Sequence derived from alignment at KK037247.1:528658..532265+ (Nannochloropsis gaditana)
ACAGCAAAGGGCAACACGTAGCCACGCCTGCAACGTGACCACGCCCATGC
TTCGATCACGCACTGACCCAATTACACGCGCTTCATAAACACCGGACAGG
TTGACCAGGGGACAGGCAGCAACTGCCTGTAAAAGGGGTGCGCTTGGCTT
TACAAgtgcttcttccccctcgggTTCTGGGTGCCCCTGTTTGGGTGAAA
CGAGCGAGAGTCAACAAGTGCGAGCAATGATTTGGCTTGTCACCACTCCT
GTTTAAGTCAACTCGTCTGTTAGATATCTGCTGTATGTACCTACATATCT
GATCGCCACACAGCGGAAATCGAACGAGACAGTTGTCGCACGCGAGTTAC
GTTGGGGTGAGATCCTTGATACATTCTGTGGTACCTCATAGGGTGTGAAA
CCCGCGATTTGGACTACGTTTTTGAAACCTGCTGGCTTtaccgcctcctc
ttgtgTTTCGGATACCTGTAAACTGATATCCGGTAGCGCATTGGTCGGGA
CGACAAGAGTCGAGTTCTGTATCTCCTGCGCTCTTCGACAATCTGCTCCC
CCAAGCCCCTCTTCGCGTCTAGTCTTCTAGCCCAAGAACAAAAATATCAA
CAAAACCGGAAGAAATGGTCAGGTACTTAAGCGGGAACGGCGCAGTGTTC
CACCACGCGCAGCTTCGTCGCAGCGTGTCCGCCTCGGATTCCCCTTCTTG
CACCGCGGCCGACCAGAAGAAAGAGACTTGCCCGGGCGggatcctccctc
cgccctttcccggCCGCAGTGCCACGATTGCCAGCaacacctccacctct
tcctctccctcgatcGCCACCACGGACACGGGCCTGAGCCACTTgaacct
ttccctcctggggggctccgtgtcctcctcgcacctggtgggagggcagg
cctcGCCCTACATGCGCCAGGCACGAAAGGATAGCTTGGGgagcagcatc
agcagcatggggggcagcgaggggggCTCTCCTCGGGTGACTCGGGCGGA
GTGCGAAAACTGCGGCTACGTGTTTTTGTGCGCGTACTCCAAGGGCGGGA
GCACCTACTGCTCTCTGGACTGTCGCACCACCCACAATCTGTACGGCGTG
GAAGACGCCTTCAACCACATGGTCACTGGCACGTCCCTGGATGCGGCGGC
CCACTCCTTCTCTGTCACGCCCCAGAGGCAGGCTGTGTATGCGCACCGAC
CGCCCCCTCGACAGCCTCTCCCGGGACCTCAGGGTAGCAGCGAGGCTCCG
AGAGCCCGAATGGACGCAGCGCGCTCCGTGGTGCGGCAAAGCGAGAATAA
ACAGAATGCGGCAGCTCATGAAGACGTCAACATGGGCGCAGGCACTGGCG
TGTGCCCGtctggggtgggaggggggggaggccggacGCAGACGGAAGCC
GTGCACGGACGGGCCAGGCGACCGGTCAGGTGGCCCCTGCGTCCAAAGAG
GCGGaagcaccccccccctctggaGCCTCGAgcggagggcagagagggtg
CCCACAGCGCGATGACGACGGCGGGTCTGCGTCGACCTCACGAAGGTCTG
CCtagtgaggaggagatggcaaCGCCGGCGCTCGCCTCGGACCTCAAATG
CTCGCGTGGTCAGGGCCTCACGgaccccccggcccccgcccccatgCCGC
CCCACCCACGtccgccgctttctcctccctcgtctcccctcttcctccac
cccgtcgcGGTCCCGaggccccgcccggccgccTGTGCGACTCCCTTGGA
GATGATCATGCCCTGCTTGAGCAGCTTTAGCAccagcgggggggaggaaa
gtgcgGCGGCAGGCGATGGTCAGGGCCAGTCCAGTCACCCCTCGTACCCT
CAAGCCTTTCCTcgacccctgcctcccccgaCTGCCGCCATCCGGTCTCG
GGCCCCAGGCTCGAAGAGTGACGAGGGgagccctctcccctttgaCACGG
CGCACATCGCTTCTTTGGAGCGGCGTCGGCACGCGGCCTTGCACTCGCAC
CATCCAGAACattcgggggaggagaggggcaggcaggggcacgggggaag
gaggaagccgggaAGGATCGCTTCCACTCGACCCGATGAAGGCTCGCTGA
AGAGAGAAACTCCTAGGGGCTCCCCATCTtttacctcttcctcggcgtct
tcctcctcctcgccctctccctcctcctcctcctcgccgcagCCCAGAAC
GCGacctgtccccctcccccgctgtACCCGTCTCCCCAGTGAGCgggagc
tgggggaggcATGCCGAGTgcagcagtggcagcagcagcaacaacaggaG
CTCGATCAACGACCGACCGGGTTGCAGGGAAAGCAAAGCCTGGAGGCCTC
CGTCAAGGCAGACTCGGCCTTCGAACGGTCTGGCACCGCCATCCGCACTG
TGTGAGGCCCGACCTCGCGCttagaagaggaagggaagatggaaggagaa
gggagagacaCGGGGCTTGGAACAAAGCAATTGGCGCGTGGAAATGATAC
TGATTTATCCGAATTGGAGTAGATTCAATAAAATATGTATATGTACATAT
CTATAGATATATCAGCATATCAGTGGAGGTGAAGCTGTGATATTTTGGAA
GACATACGTGTTCGGGGACGATGGGGGCAGCATTCGCGCTCTCAAATCTT
TCAAATGTATCGATACCCTGAGTGTAACGCATTTGATATTTGCCCGGTTT
GTACACATGTCTGTAAACCACTTTTGATTTTAGGTAGTCCATTAAGGTGG
TGGGAGGCTCGTCGAAGGCTGGAAGGAACCCTGCCAAGCCTGGATGTGTG
TTTAATTTTTGAGCATTTTGAGACGTTCAGACAATATTTAATTTACGAGT
GAGGAGAAAAAACGGGGAAGAGTAGAGGTAGAGGCGTTGACGCGTGTGTA
GGTAAGATGGGTAGGTaatttggagggaggagtcttGTTTTAATCTCGTA
ATGGCTGGCATGTCTTGATGGTTGACAGCACACGCTATATTCAAAAATGT
AATGCTGACACGATACTGTCGGATTAAAATAAACGCCACCTGCCGGGGTG
TATAGGTGAGGCATAAGTCGTCTTTTCGCAAGAGTACCTATTGTGTGCCA
GTGAAGGCGGTCGATGAGGCGCCGTCACGCTCGGTTACAGAATCGTCTTG
GGGTCTTGATTGAGAAAGACTCTCCGGGGATTGAAAATTGACAGAGGATA
TCTACTTAACTCGGATTTCTGCGGTGCGCTGAGCAGAATATGTGAGCGTG
GTGTCCGAGTGAGAATGCTATGAAGCTGACGCCAGGCAAAGAACACGCCT
GAGGGACGATACATGTAGTCGTATGAACTCCGGCAGGCAGCACCAACCTC
CTTGTCGCACCAGACAAGAGCATGGGCCGTTGAATGAATTGGCGTCAGGT
TTGAGAGGTGTAAAAGCTGAcggcaggggggaaaaagttGATTGAAATGG
AAGTTTTTTATTTCTTGCAAAACATCGTATGATTAAAAGAAGCACTTTCT
ACTAAGCAAGACTTAATTGATTTGTCGTCCACGCATTTGGGACTAGGGTA
ATACTacaagaaaaagacatgAAACATTTGCCCACCAAGATGGGTGGGGT
TGCGGCAC back to topCoding sequence (CDS) from alignment at KK037247.1:528658..532265+ >rna8085 ID=rna8085|Name=rna8085|organism=Nannochloropsis gaditana|type=CDS|length=1791bp|location=Sequence derived from alignment at KK037247.1:528658..532265+ (Nannochloropsis gaditana)
ATGGTCAGGTACTTAAGCGGGAACGGCGCAGTGTTCCACCACGCGCAGCT
TCGTCGCAGCGTGTCCGCCTCGGATTCCCCTTCTTGCACCGCGGCCGACC
AGAAGAAAGAGACTTGCCCGGGCGggatcctccctccgccctttcccggC
CGCAGTGCCACGATTGCCAGCaacacctccacctcttcctctccctcgat
cGCCACCACGGACACGGGCCTGAGCCACTTgaacctttccctcctggggg
gctccgtgtcctcctcgcacctggtgggagggcaggcctcGCCCTACATG
CGCCAGGCACGAAAGGATAGCTTGGGgagcagcatcagcagcatgggggg
cagcgaggggggCTCTCCTCGGGTGACTCGGGCGGAGTGCGAAAACTGCG
GCTACGTGTTTTTGTGCGCGTACTCCAAGGGCGGGAGCACCTACTGCTCT
CTGGACTGTCGCACCACCCACAATCTGTACGGCGTGGAAGACGCCTTCAA
CCACATGGTCACTGGCACGTCCCTGGATGCGGCGGCCCACTCCTTCTCTG
TCACGCCCCAGAGGCAGGCTGTGTATGCGCACCGACCGCCCCCTCGACAG
CCTCTCCCGGGACCTCAGGGTAGCAGCGAGGCTCCGAGAGCCCGAATGGA
CGCAGCGCGCTCCGTGGTGCGGCAAAGCGAGAATAAACAGAATGCGGCAG
CTCATGAAGACGTCAACATGGGCGCAGGCACTGGCGTGTGCCCGtctggg
gtgggaggggggggaggccggacGCAGACGGAAGCCGTGCACGGACGGGC
CAGGCGACCGGTCAGGTGGCCCCTGCGTCCAAAGAGGCGGaagcaccccc
cccctctggaGCCTCGAgcggagggcagagagggtgCCCACAGCGCGATG
ACGACGGCGGGTCTGCGTCGACCTCACGAAGGTCTGCCtagtgaggagga
gatggcaaCGCCGGCGCTCGCCTCGGACCTCAAATGCTCGCGTGGTCAGG
GCCTCACGgaccccccggcccccgcccccatgCCGCCCCACCCACGtccg
ccgctttctcctccctcgtctcccctcttcctccaccccgtcgcGGTCCC
GaggccccgcccggccgccTGTGCGACTCCCTTGGAGATGATCATGCCCT
GCTTGAGCAGCTTTAGCAccagcgggggggaggaaagtgcgGCGGCAGGC
GATGGTCAGGGCCAGTCCAGTCACCCCTCGTACCCTCAAGCCTTTCCTcg
acccctgcctcccccgaCTGCCGCCATCCGGTCTCGGGCCCCAGGCTCGA
AGAGTGACGAGGGgagccctctcccctttgaCACGGCGCACATCGCTTCT
TTGGAGCGGCGTCGGCACGCGGCCTTGCACTCGCACCATCCAGAACattc
gggggaggagaggggcaggcaggggcacgggggaaggaggaagccgggaA
GGATCGCTTCCACTCGACCCGATGAAGGCTCGCTGAAGAGAGAAACTCCT
AGGGGCTCCCCATCTtttacctcttcctcggcgtcttcctcctcctcgcc
ctctccctcctcctcctcctcgccgcagCCCAGAACGCGacctgtccccc
tcccccgctgtACCCGTCTCCCCAGTGAGCgggagctgggggaggcATGC
CGAGTgcagcagtggcagcagcagcaacaacaggaGCTCGATCAACGACC
GACCGGGTTGCAGGGAAAGCAAAGCCTGGAGGCCTCCGTCAAGGCAGACT
CGGCCTTCGAACGGTCTGGCACCGCCATCCGCACTGTGTGA back to top
|