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Properties
| Property Name | Value |
|---|
| Product | cox11 cytochrome c oxidase assembly protein |
| Orig transcript id | gnl|cribi|Naga_100528g2.9503.mrna |
| Orig protein id | gnl|cribi|Naga_100528g2.9503 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:514239..515598 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8077 ID=rna8077|Name=rna8077|organism=Nannochloropsis gaditana|type=mRNA|length=543bp
GAGGGGGCGGGGGAGAAGCTAGTGGTGTACGCAGGGCACGATTCGACCGT
GGTGCCCCTCCTAGTCGCCTTGGGCCTGTGGGAAGACGTGTGGCCTCCCT
ATGCCGCGAACCTGGTGCTGGAGCTGGCGGAGCGGGAGGGGCCGGGGGCC
GGGGAGGAGGGGGAGAGGCACTTTGTCAGGGTGCTGTACAATGACGAGGA
GCGGATGTTGTGGGCCAAGGAGGGGGACGCGGACGTGGGGGGTCGGTGGT
ATTCGCTTCGGGAAATTTCGGGCAGACTGCGGAAATTGGTGCCTAAGGAC
TTCGAGGAGGAATGCCGGTGCCGACACGAGGAGATGTCCGAGGGAGGAGG
GGTGGAGCACATTGGCTCAGCCATCAAGTGAGGGGTGGAGCACATTGGCT
CAGCGATCAAGTGAGGGGGGGAGGGAAGGGGGAGGCAGGAAGGGAGGGGT
TGAGGTCCGGCTCGGAGGGCGGGGACGGCGGTGGCGTGAAACGCCAGAAG
ACACCCTCCAGTGATCCGACGCAACGTGTCTTTCAAAATTTGA back to topprotein sequence of rna8077 >rna8077-protein ID=rna8077-protein|Name=rna8077|organism=Nannochloropsis gaditana|type=polypeptide|length=297bp
MIPHRLIVGSRTKYGLAGHFFNLRSRSWSAFSSSHISTCVRRRPLPSALP
LSRLSVHFSRAWQPCRRSFSQKSARAAQARELSEKNKRLGLYAISIVIAV
TGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFN
ADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFP
PKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEI
TLSYTFFKTDEENEEEVQEILRRNPNFPGSGGAHAVVGGEGGRRELA back to topmRNA from alignment at KK037247.1:514239..515598- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8077 ID=rna8077|Name=rna8077|organism=Nannochloropsis gaditana|type=mRNA|length=1360bp|location=Sequence derived from alignment at KK037247.1:514239..515598- (Nannochloropsis gaditana)
GTGCAAACTCAGCCTTTGGGTTTCTGTGGCTTTCTTTTCCGTGCATACAA
ACGCTCATAGCTGAAGCCTCTCTTTCCGGCCTTGCACACAGATTATGATC
CCACACCGGCTAATCGTGGGTTCACGTACCAAGTATGGTCTGGCTGGTCA
TTTCTTCAATTTAAGGTCAAGAAGCTGGAGCGCGTTCAGCAGCAGCCACA
TCTCTACGTGCGTTCGTCGACGCCCTCTACCTTCTGCCCTTCCCCTGTCC
CGCTTGTCCGTGCACTTCAGTCGTGCTTGGCAGCCATGCCGGCGATCTTT
TAGTCAAAGTACGTATGCGCGGGGATGAATCTGACAGTATTCTATGCGTT
CCCTCTTTTGTAAGGGACTGGGAGTCCTAAGTAGCAGTCGTAACTTTTTT
TTGTGACGGTCTGTGTCGACGATGGCGGTGCCTGAATGCGTCGCCGCACC
TACTTGCTAGTATTACCCTGTCGGTCATATCTGGCTTGACACAACCATGA
GATCAATCCAAAATTGAGTCTTAGTGCTTAGTGCGTTCGGCTACCCAATC
GAATGGTTCCGAGCTCTCACACTCTCTAATTTGTCCCTGCAACCCTTGCA
TTTTTGCGCGCATGTATTCCCAAATATATAGAGTCTGCCCGAGCCGCTCA
AGCCCGTGAGCTTTCAGAGAAGAACAAGCGTTTGGGACTTTACGCCATCT
CCATCGTGATTGCCGTCACGGGCGTCAGCTACGCCTCTGTCCCGCTCTAC
AAAGTGTTTTGTCAGACTACAGGATTTGGAGGGACGACCAAGCGCGCGGA
TTCCCTCGAGTCCGTGGTGGGCACCGCGCCCGCAGAGAAGTCTCGCCCCA
TCAAGATCGTCTTTAACGCCGACGTTTCCGACACGACGCCCTGGAAGTTC
TACCCCACGCAACCGGACATCCTGGTGGTCCCCGGCGAGACGGCTCTGGC
CTTCTTCACCGTCAAGAACAAAACGGACAAGGCTGTGATCGGCGTCGCCA
CCTACAACGTCTTCCCGCCCAAGGCAGGCTTGTACTTCAACAAAATTCAA
TGTTTCTGTTTCGACGAGCAGCGGCTAAAGCCCCGCGAGGAGGTGGACAT
GCCCGTCTTCTTCTTTGTGGACCCGGAGATGCTGAACGACCCATCCATGG
ACAACGTGCACGAGATCACGCTCAGCTACACCTTCTTCAAGACGGACGAG
GAGAACGAGGAGGAGGTGCAGGAAATCCTTCGAAGGAACCCGAACTTCCC
CGGGAGCGGGGGGGCCCACGCCGTGGTAGGGGGGGAAGGGGGACGGAGGG
AGCTCGCGTGAGGAGAAAGTTGAGAGGCGAAAAAGCATAATAAATAGCCC
CACTGTTTTA back to topCoding sequence (CDS) from alignment at KK037247.1:514239..515598- >rna8077 ID=rna8077|Name=rna8077|organism=Nannochloropsis gaditana|type=CDS|length=1788bp|location=Sequence derived from alignment at KK037247.1:514239..515598- (Nannochloropsis gaditana)
AGTCTGCCCGAGCCGCTCAAGCCCGTGAGCTTTCAGAGAAGAACAAGCGT
TTGGGACTTTACGCCATCTCCATCGTGATTGCCGTCACGGGCGTCAGCTA
CGCCTCTGTCCCGCTCTACAAAGTGTTTTGTCAGACTACAGGATTTGGAG
GGACGACCAAGCGCGCGGATTCCCTCGAGTCCGTGGTGGGCACCGCGCCC
GCAGAGAAGTCTCGCCCCATCAAGATCGTCTTTAACGCCGACGTTTCCGA
CACGACGCCCTGGAAGTTCTACCCCACGCAACCGGACATCCTGGTGGTCC
CCGGCGAGACGGCTCTGGCCTTCTTCACCGTCAAGAACAAAACGGACAAG
GCTGTGATCGGCGTCGCCACCTACAACGTCTTCCCGCCCAAGGCAGGCTT
GTACTTCAACAAAATTCAATGTTTCTGTTTCGACGAGCAGCGGCTAAAGC
CCCGCGAGGAGGTGGACATGCCCGTCTTCTTCTTTGTGGACCCGGAGATG
CTGAACGACCCATCCATGGACAACGTGCACGAGATCACGCTCAGCTACAC
CTTCTTCAAGACGGACGAGGAGAACGAGGAGGAGGTGCAGGAAATCCTTC
GAAGGAACCCGAACTTCCCCGGGAGCGGGGGGGCCCACGCCGTGGTAGGG
GGGGAAGGGGGACGGAGGGAGCTCGCGTGAATGATCCCACACCGGCTAAT
CGTGGGTTCACGTACCAAGTATGGTCTGGCTGGTCATTTCTTCAATTTAA
GGTCAAGAAGCTGGAGCGCGTTCAGCAGCAGCCACATCTCTACGTGCGTT
CGTCGACGCCCTCTACCTTCTGCCCTTCCCCTGTCCCGCTTGTCCGTGCA
CTTCAGTCGTGCTTGGCAGCCATGCCGGCGATCTTTTAGTCAAAAGTCTG
CCCGAGCCGCTCAAGCCCGTGAGCTTTCAGAGAAGAACAAGCGTTTGGGA
CTTTACGCCATCTCCATCGTGATTGCCGTCACGGGCGTCAGCTACGCCTC
TGTCCCGCTCTACAAAGTGTTTTGTCAGACTACAGGATTTGGAGGGACGA
CCAAGCGCGCGGATTCCCTCGAGTCCGTGGTGGGCACCGCGCCCGCAGAG
AAGTCTCGCCCCATCAAGATCGTCTTTAACGCCGACGTTTCCGACACGAC
GCCCTGGAAGTTCTACCCCACGCAACCGGACATCCTGGTGGTCCCCGGCG
AGACGGCTCTGGCCTTCTTCACCGTCAAGAACAAAACGGACAAGGCTGTG
ATCGGCGTCGCCACCTACAACGTCTTCCCGCCCAAGGCAGGCTTGTACTT
CAACAAAATTCAATGTTTCTGTTTCGACGAGCAGCGGCTAAAGCCCCGCG
AGGAGGTGGACATGCCCGTCTTCTTCTTTGTGGACCCGGAGATGCTGAAC
GACCCATCCATGGACAACGTGCACGAGATCACGCTCAGCTACACCTTCTT
CAAGACGGACGAGGAGAACGAGGAGGAGGTGCAGGAAATCCTTCGAAGGA
ACCCGAACTTCCCCGGGAGCGGGGGGGCCCACGCCGTGGTAGGGGGGGAA
GGGGGACGGAGGGAGCTCGCGTGAATGATCCCACACCGGCTAATCGTGGG
TTCACGTACCAAGTATGGTCTGGCTGGTCATTTCTTCAATTTAAGGTCAA
GAAGCTGGAGCGCGTTCAGCAGCAGCCACATCTCTACGTGCGTTCGTCGA
CGCCCTCTACCTTCTGCCCTTCCCCTGTCCCGCTTGTCCGTGCACTTCAG
TCGTGCTTGGCAGCCATGCCGGCGATCTTTTAGTCAAA back to top
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