EWM22617.1, cds8055 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|585103181|gb|EWM22617.1| (cox11 cytochrome c oxidase assembly protein [Nannochloropsis gaditana]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0 Query: 1 MIPHRLIVGSRTKYGLAGHFFNLRSRSWSAFSSSHISTCVRRRPLPSALPLSRLSVHFSRAWQPCRRSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQEILRRNPNFPGSGGAHAVVGGEGGRRELA 297 MIPHRLIVGSRTKYGLAGHFFNLRSRSWSAFSSSHISTCVRRRPLPSALPLSRLSVHFSRAWQPCRRSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQEILRRNPNFPGSGGAHAVVGGEGGRRELA Sbjct: 1 MIPHRLIVGSRTKYGLAGHFFNLRSRSWSAFSSSHISTCVRRRPLPSALPLSRLSVHFSRAWQPCRRSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQEILRRNPNFPGSGGAHAVVGGEGGRRELA 297
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|698784475|ref|XP_009825281.1| (hypothetical protein H257_03068 [Aphanomyces astaci] >gi|574119784|gb|ETV85263.1| hypothetical protein H257_03068 [Aphanomyces astaci]) HSP 1 Score: 268.855 bits (686), Expect = 3.268e-87 Identity = 123/196 (62.76%), Postives = 156/196 (79.59%), Query Frame = 0 Query: 73 SARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQ 268 S++AA AR+L EKN+R+ Y +VI G +YA+VPLYKVFCQ TGFGGTT+R+D L + +P E + PI+I F+ VS PW F P Q D+++VPGETALAF+T N TDKA+ GVATYNV+PPKAGLYFNKIQCFCF+EQRLK +EE+DMPVFFF+DP++++DPSM NV ITLSYTFFKTD+ +EE+V+ Sbjct: 28 SSKAAYARQLKEKNRRILYYTSGVVILFFGGAYAAVPLYKVFCQMTGFGGTTQRSDIL-AADKLSPVEGAHPIRITFDGGVSGALPWTFKPVQRDLIIVPGETALAFYTAMNNTDKAITGVATYNVYPPKAGLYFNKIQCFCFEEQRLKAQEEIDMPVFFFIDPDIVDDPSMQNVSNITLSYTFFKTDDVDEEDVE 222
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|568007564|gb|ETL81801.1| (hypothetical protein L917_17935 [Phytophthora parasitica] >gi|570315631|gb|ETO63579.1| hypothetical protein F444_18733 [Phytophthora parasitica P1976] >gi|570969705|gb|ETP32824.1| hypothetical protein F442_18548 [Phytophthora parasitica P10297]) HSP 1 Score: 267.7 bits (683), Expect = 2.069e-86 Identity = 122/203 (60.10%), Postives = 156/203 (76.85%), Query Frame = 0 Query: 67 RSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQE 269 R S+++A A+ + ++N+R +Y IA G+SYA+VPLYK+FCQ TGFGGTT+R + + T P E ++PI+I F+ VS PW F P Q D+L+VPGETALAF+T KNKTDKA+ GVATYNV+PP AG+YFNKIQCFCF+EQRLKP EE+DMPVFFF+DPE+ +DPSM+ VH ITLSYTFFKTD+ +EEEV + Sbjct: 35 RCISKRAAEEARRESIKQRNRRAVMYLAGTAIAWVGISYAAVPLYKIFCQMTGFGGTTQRVEEFVADKLT-PREDAKPIRITFDGGVSANMPWVFRPQQRDLLLVPGETALAFYTAKNKTDKAITGVATYNVYPPSAGVYFNKIQCFCFEEQRLKPNEEIDMPVFFFIDPEICDDPSMNGVHNITLSYTFFKTDDVSEEEVDD 236
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|566011925|gb|ETI34836.1| (hypothetical protein F443_18735 [Phytophthora parasitica P1569]) HSP 1 Score: 266.929 bits (681), Expect = 3.569e-86 Identity = 121/203 (59.61%), Postives = 156/203 (76.85%), Query Frame = 0 Query: 67 RSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQE 269 R S+++A A+ + ++N+R +Y IA G+SYA+VPLYK+FCQ TGFGGTT+R + + T P E ++PI++ F+ VS PW F P Q D+L+VPGETALAF+T KNKTDKA+ GVATYNV+PP AG+YFNKIQCFCF+EQRLKP EE+DMPVFFF+DPE+ +DPSM+ VH ITLSYTFFKTD+ +EEEV + Sbjct: 35 RCISKRAAEEARRESIKQRNRRAVMYLAGTAIAWVGISYAAVPLYKIFCQMTGFGGTTQRVEEFVADKLT-PREDAKPIRVTFDGGVSANMPWVFRPQQRDLLLVPGETALAFYTAKNKTDKAITGVATYNVYPPSAGVYFNKIQCFCFEEQRLKPNEEIDMPVFFFIDPEICDDPSMNGVHNITLSYTFFKTDDVSEEEVDD 236
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|673027332|ref|XP_008867627.1| (hypothetical protein H310_04871 [Aphanomyces invadans] >gi|574476400|gb|ETW03398.1| hypothetical protein H310_04871 [Aphanomyces invadans]) HSP 1 Score: 264.233 bits (674), Expect = 2.768e-85 Identity = 121/196 (61.73%), Postives = 153/196 (78.06%), Query Frame = 0 Query: 73 SARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQ 268 S++AA A++L EKN+R+ Y +VI G +YA+VPLYKVFCQ TGFGGTT+R+D L + +P E + PI+I F+ V PW F P Q D+++VPGETALAF+T N +DKAV GVATYNV PPKAGLYFNKIQCFCF+EQRLK REE+DMPVFFF+DP++++DPSM NV ITLSYTFFKTD+ +E +V+ Sbjct: 27 SSKAAYAKQLQEKNRRILYYTSGVVILFFGGAYAAVPLYKVFCQMTGFGGTTQRSDIL-AAEKLSPVEGAHPIRITFDGGVGGAMPWTFKPVQRDLIIVPGETALAFYTATNNSDKAVTGVATYNVHPPKAGLYFNKIQCFCFEEQRLKAREEIDMPVFFFIDPDIVDDPSMQNVSNITLSYTFFKTDDVDESDVE 221
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|1214703800|gb|OWZ15755.1| (Cytochrome c oxidase [Phytophthora megakarya]) HSP 1 Score: 264.618 bits (675), Expect = 3.117e-85 Identity = 121/203 (59.61%), Postives = 154/203 (75.86%), Query Frame = 0 Query: 67 RSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQE 269 R S+++A A+ + +N+R +Y IA G+SYA+VPLYK+FCQ TGFGGTT+R + + T P E ++PI+I F+ VS PW F P Q D+L+ PGETALAF+T KNKTDKA+ GVATYNV+PP AG+YFNKIQCFCF+EQRLKP EE+DMPVFFF+DPE+ +DPSM+ VH ITLSYTFFKTD+ +E+EV E Sbjct: 31 RCISKRAAEEARRESIKMRNRRAVMYLAGTAIAWVGISYAAVPLYKIFCQMTGFGGTTQRVEEFVADKLT-PREDAKPIRITFDGGVSANMPWVFRPQQRDLLLAPGETALAFYTAKNKTDKAITGVATYNVYPPSAGVYFNKIQCFCFEEQRLKPNEEIDMPVFFFIDPEICDDPSMNGVHNITLSYTFFKTDDVSEDEVDE 232
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|1173952867|gb|OQS00446.1| (cytochrome c oxidase assembly protein COX11, mitochondrial precursor [Achlya hypogyna]) HSP 1 Score: 261.536 bits (667), Expect = 5.560e-84 Identity = 124/222 (55.86%), Postives = 162/222 (72.97%), Query Frame = 0 Query: 52 SRLSVHFSRAWQPCRRSFSQK-----SARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQ 268 S + + F R +P R Q+ S R++ R L EKNKR+ LY S + G +YA+VPLYK+FCQ TGFGGTT+R+D L + +P E + PI++ F+ V+ PW F P Q D+++VPGETALAF+T KN TDKA+ GVATYNV PPKAGLYFNKIQCFCF+EQRLK EE+DMPVFFF+DP++++DPSM NV ITLSYTFFKT++ +E++V+ Sbjct: 20 SIMVLAFLRPLRPVLRPALQQARFMSSQRSSYQRTLDEKNKRIMLYTASTALLFFGAAYAAVPLYKIFCQMTGFGGTTQRSDIL-TAEKLSPVEGAHPIRVTFDGGVAGAMPWSFRPIQRDLVIVPGETALAFYTAKNPTDKAITGVATYNVHPPKAGLYFNKIQCFCFEEQRLKANEEIDMPVFFFIDPDIVDDPSMTNVSNITLSYTFFKTEDVDEDDVE 240
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|675209167|ref|XP_008913468.1| (hypothetical protein PPTG_17565 [Phytophthora parasitica INRA-310] >gi|567949389|gb|ETK75121.1| hypothetical protein L915_18217 [Phytophthora parasitica] >gi|567978053|gb|ETL28547.1| hypothetical protein L916_18121 [Phytophthora parasitica] >gi|568037424|gb|ETM35009.1| hypothetical protein L914_18021 [Phytophthora parasitica] >gi|568086249|gb|ETN01141.1| hypothetical protein PPTG_17565 [Phytophthora parasitica INRA-310] >gi|570939419|gb|ETP04676.1| hypothetical protein F441_18594 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 257.684 bits (657), Expect = 1.857e-82 Identity = 117/193 (60.62%), Postives = 148/193 (76.68%), Query Frame = 0 Query: 67 RSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKT 259 R S+++A A+ + ++N+R +Y IA G+SYA+VPLYK+FCQ TGFGGTT+R + + T P E ++PI+I F+ VS PW F P Q D+L+VPGETALAF+T KNKTDKA+ GVATYNV+PP AG+YFNKIQCFCF+EQRLKP EE+DMPVFFF+DPE+ +DPSM+ VH ITLSYTFFKT Sbjct: 35 RCISKRAAEEARRESIKQRNRRAVMYLAGTAIAWVGISYAAVPLYKIFCQMTGFGGTTQRVEEFVADKLT-PREDAKPIRITFDGGVSANMPWVFRPQQRDLLLVPGETALAFYTAKNKTDKAITGVATYNVYPPSAGVYFNKIQCFCFEEQRLKPNEEIDMPVFFFIDPEICDDPSMNGVHNITLSYTFFKT 226
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|301105186|ref|XP_002901677.1| (cytochrome c oxidase assembly protein COX11, mitochondrial precursor [Phytophthora infestans T30-4] >gi|262100681|gb|EEY58733.1| cytochrome c oxidase assembly protein COX11, mitochondrial precursor [Phytophthora infestans T30-4]) HSP 1 Score: 256.914 bits (655), Expect = 3.388e-82 Identity = 116/193 (60.10%), Postives = 148/193 (76.68%), Query Frame = 0 Query: 67 RSFSQKSARAAQARELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKT 259 R S+++A A+ + ++N+R +Y IA G+SYA+VPLYK+FCQ TGFGGTT+R + + T P E ++PI+I F+ VS PW F P Q D+L+VPGETALAF+T +NKTDKA+ GVATYNV+PP AG+YFNKIQCFCF+EQRLKP EE+DMPVFFF+DPE+ +DPSM+ VH ITLSYTFFKT Sbjct: 35 RCISKRAAEEARRESMKQRNRRAVMYLAGTAIAWVGISYAAVPLYKIFCQMTGFGGTTQRVEEFVADKLT-PREDAKPIRITFDGGVSANMPWVFRPQQRDLLLVPGETALAFYTARNKTDKAITGVATYNVYPPSAGVYFNKIQCFCFEEQRLKPNEEIDMPVFFFIDPEICDDPSMNGVHNITLSYTFFKT 226
BLAST of EWM22617.1 vs. NCBI_GenBank
Match: gi|953497971|emb|CEG40731.1| (glycine cleavage system h protein [Plasmopara halstedii]) HSP 1 Score: 259.996 bits (663), Expect = 8.721e-82 Identity = 119/194 (61.34%), Postives = 151/194 (77.84%), Query Frame = 0 Query: 78 QAR--ELSEKNKRLGLYAISIVIAVTGVSYASVPLYKVFCQTTGFGGTTKRADSLESVVGTAPAEKSRPIKIVFNADVSDTTPWKFYPTQPDILVVPGETALAFFTVKNKTDKAVIGVATYNVFPPKAGLYFNKIQCFCFDEQRLKPREEVDMPVFFFVDPEMLNDPSMDNVHEITLSYTFFKTDEENEEEVQE 269 QAR + ++N+R +Y IA G+SYA+VPLYK+FCQ TGFGGTT+RA+ + T P E ++PI++ F+ VS PW F P Q DIL+VPGETALAF+T KNK+DKA+ GVATYNV+PP +G+YFNKIQCFCF+EQRLKP EE+DMPVFFF+DPE+ +DP M+ VH ITLSYTFFKTD+ NEE+V + Sbjct: 157 QARRDSIKKRNRRAVIYLAGTAIAWVGISYAAVPLYKIFCQMTGFGGTTQRAEDFTASKLT-PREDAKPIRVTFDGGVSANMPWVFRPQQRDILLVPGETALAFYTAKNKSDKAITGVATYNVYPPSSGVYFNKIQCFCFEEQRLKPNEEIDMPVFFFIDPEICDDPFMNGVHNITLSYTFFKTDDINEEDVDD 349 The following BLAST results are available for this feature:
BLAST of EWM22617.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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