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Properties
| Property Name | Value |
|---|
| Product | Zinc finger, CW-type |
| Orig transcript id | gnl|cribi|Naga_100023g65.3959.mrna |
| Orig protein id | gnl|cribi|Naga_100023g65.3959 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:510818..512089 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8074 ID=rna8074|Name=rna8074|organism=Nannochloropsis gaditana|type=mRNA|length=5037bp
GAAGGGTCGCATTCTATCACACAAATGACATCGGGGGCGGATTCCATCAC
ATGGATGGTGCTGGGTTCCTATTCCATCACATGGATGACGCGAGCAGGAA
TCTCTTCGCCGTGGCATCGCCCACTTTGGCGCAATGCGGGGCCTGTCTGC
GGGCTCCTGTCTCCAAAATTTCCATACAATTCGCGCGCACTCACACTCGA
AATACTATCTAGACACATAGAGATGTGAAGAATGCGGTCAATGTTGTAGC
AAAATAAAATTCATGGGGATGGAGTCGCCGCTGCTGGAACCTGTGCCTGT
CCCGCTTCCTACATCAACTGGAGCTCCCCTGAGTAGCAAAGAACTGTCTC
CAGTCTCAGCATGTGAAGCACGGGGAGTAAAACGTGGTCGAAATGATGGA
GCGACCAGAGACACTGCGGCTTGCAGCAAGGTCATCCACCCCTCTAGCCT
CCGCCTACCAACTCCCTCTGATGCACCGCCCGTCCACGATGAGACCCTTA
CTGAACCCCGCAGCGACCAAAAAGGCTTACTCATGGACGACTGCACATTG
CAATGCGAGAATACACTACATAGTAAGAGAGCCGAAATTTTGCAGGGAAA
TAAGCCGGGGAAAATTGACCGGCTAGAGGAAAAGGGCACGAGTATCACCA
TCTTGGGGCCCTTGACAGAGGGATCGGATCATGAAAGGGCGAATGACTTT
TCCCTACCGCACGCAGACACTCCTGGCTCAGATGGACCCCGTCGATATGT
ATCTCAGCGCGCTCGGGAAAGGCTCGTTCAAGGCAGTTTACAGCACACAG
CAATCACCGTCTTTTCCGTTGAAGCACGTTCAGCACACCCACCCGAGAAG
CCCCCCGACCAAAACGCTACTAACCTTCCTTCTGCCCAAGGCCCTGTCCT
TCCATCTTCCCCTCCCAATCAATCTTGTCGTCTCTCTCCTCCTCGAGACG
GGAACATTCCCCTTGCGTTCGTCCCTGTATTCCCACCCCGGCCGGCACCT
GCTGCTTGTCTATCCGCTCCTTCTATCCCGCCATCCTCTTCCGAGACATT
GCCCCCCACCCTTCATCTTCCCGGCTTTGAACGTAAAACGGTGTCAGAGA
CCCGTCCCGTTCCCAAAGATCCCAATGATGGCTCCTTGCGCGTGAAGCTT
GGTCCTTCCGCGCCTGCTCCCCCCCCCTACAGACCCACACGAACACGGCG
ACACGAGCCCACGCAACCACCATCAGCGCTTGCGTCCTCCATCTCAAGAC
AGCGGGGACAAGATAATGTCTCTGGTCCCAAGTTATTGGCGCAGGAGTCA
TCAAGGGCGTCGGCGGTAGGCCAAAAGCAAGGACAGCAAACTTATCTGTT
GCCGTCCGCACCACCTCCAGTAACTACAACAGTGACGACGACAAGGACAA
AGTTGTCTCCAAAAATCTCAACAACAGCGCCTCAAGAAACCTGTGGTGAT
AACGAAGACTGGGGAGGTCCTGCAGCGGCATTCAACGCGGCGGCGATTCG
TGGAATATCCAGACAAGGAGAAGGGAGAGGGGGCAAGAACGGAGAGCCCG
GCGGGGGGGGACCAAGGCGACCAGTGGAGGGTCTGGGCATCTGGCGACGT
GGAAGAGGAGATCCGCGGAAAGTAGGAAGGGGCGTGGGCCACAGGAAAGG
CGTGCTCGGCAATGTGGAGGCCAATCGCGGGTCTGTGAAGGGGCCCGCTG
GCCGAGGGCGGGGGGGACGGGGCAATGCGATGACGTACTTGGCGTTGAAC
GGGGAGAGGTTGCAGGGCCCCGCCGCCATGGAGCGACATCGACAAGACAC
GGCTAAGATCCAGCAAGGATTGACCTTCACAGCCCAACGCAGTGCCCTTC
GAGCGGCCTTGCTCGCGCGACAACCGACGGCAGTGGGTGAAGGTGGCGTG
GACGGGAGCAGCCACGGGGGTGTCCCCATACCTCCAGGCAGGGCCTCGAC
AGAGGAGACTGATGCCAAGAATCTTTTGAGCTACCCGGGGTGGGGCATTC
CAGAAGTCATCGTGCGATCGTATGAGGAGCTGGGCGTCCGTCGGCTTTTC
CCCTGGCAGGTTGCGTGCCTGGAGGCAGGCCAGGGGAGGGTGCTACGCGA
GGGACGGAATCTGGTCTACAGCGCCCCGACAAGCGGTGGGAAAACCCTAG
TGGCGGAGCTGTTGATGTTGCGGGCATTGACGCACGCCGTAGAGGGCGGC
ACGGCCTTGTTTGTGGTGCCTTTCGTCGCCTTGGCCGAGGAGAAGGCCGG
CTACTTCCGTCGAGTGTGGGCGGGCGTGGATCTGGGCGTGAAGGCCTTCC
ACTCGGACGCCGTGGACGCGACCCTCTCAGAGGACGTGCACGTGGCTGTT
TGCACCATCGAACGCGCCAATGCCCTGGTAAACCGCTTGCTGGAACGCGG
AGAACTGGCGCGGGTGAAGGTCGTGGTCGTGGACGAGCTGCACATGGTGG
GGGACGCGGGGAGGGGCTTCTTGATCGAGGTCATGCTGAGCAAGGTGCGT
TTGGCCGCGTCGCTCTGGTCACAGGCTTCCCTTATGGCCTCTGACCATGC
TACTGGGAACGCTGTGAGATTGGACCCTGCGGCCGAAGTGAACGACCAGC
GAGGCGGCGCGACGGTCGACTGCACTACCCGAAAGAATGCGGCTCGAGTG
CAAATTATCGGCCTGAGTGCCACCCTCCCCAACCTCCCTCAGGTCGCTGC
CTGGCTGGACGCCCATCTCTACGTCACCGACTTCCGCCCTGTCCAGCTCT
CTCTGCTGCTTTGTGCCGGCAAGCGCCTCGAGCGACTCCGTAGAGCTCCT
CCTCCCAACCCCTCGAAGGCCTCCTCCGCCTCTGCCTCTCTTTCAGCGTG
GGAGCCCCTTCGCGAACTACCCTCCACCATTTCGGACGAAACTCAAGCCG
TGCTCCACTTGTGCTTGGAATCCGTGTCGCAGGGCCACGGCGTACTCGTG
TTCTGTACCTCCCGCGCCTGGACTCAACGCTGTGCCAAAAGCATTGCCCG
CGCCTTTGCGGCCTGCCTCGGTCCTTGGACTGAGGCCGTCAAGGTCCAGG
AAGGGAGAAATGAGCTGCTGGCTCGGCTGCGCTTGACGTCGGTGGGCCTG
GCGAAGGAGCTGGAAGAGAGCGTGAAGCATGGGGTCGCGTTCCATCACGC
CGGATTGACCATGGAAGAGCGAACGCTCTTGGAAGGAGGCTTCAAGACTG
GGGTGTTGTCGACACTCGTGGCAACCAGCACCTTGGCCGCAGGGGTCAAC
CTCCCGGCTCGTCGTGTGATCGTCAGGAGCCGTATAGGCTTCGACGGCCA
GGAAATGAGCGTTGCACAGTTCCAGCAAATGTGCGGGCGGGCGGGCAGGT
TTGGCATCGACGAGACGGGGGAAGCCATTCTGATGACACGAGAGGCGGAT
GTCCAAGCAGCCCGGGCGTTTGCTGCCAGATGCCTGCCCCCCATGATGAG
CGCCTTGCATGTGGGTGAGGGAGGAGGGGTAGAACGAGCTCTGCTGGAGG
TGGTTATGGGAAGACTGGCGGGCTGTAAGGAGGAGGAAGGGGGAGAGGGA
TGGCTGGAGACATTCGCTCGATGTACCCTGTATGCTGTGCAGGCTCACGA
GGAGGAAGGCAAGGAAGAGAACGGAGAGGGCTTGGGGGTAGAAGGGCAGG
CATGCAAGGTGCTCCAGCGCTTTCGCCGGGGCCTGGACTATCTCGTGCAG
AATCGGTACATAGGGCGCCGAAGCATTGCAGCCGTAAAGGAAGTGAGCGG
CAGCACGGTGCGAGACGGAGAGACTAGTGGAGGGTCGATAGTAGGACCGG
ACGAAAGCCATCTGGATCCCGAGAGGGGCGGGGGGCAAGGCATCCTCCAA
GGGGCGAACGCAGCAGTCGATGGCACACGACCGGTTCCGGCGGCCACGAG
AGAGCACGCTGGTGGAGCAGGCCCGTCCCTGCCCACGGCAAGACCCAAAA
CTTGTTATTTTGGGACCCAGCTGGGAGCTGCCACCTTTTTTGCAGGCATG
TCCCCCCGGGACGCGACCGCCATGCTCGCCTCCCTCTCTCAGGCGACCAC
CAAGGGGGTCATCCTCTCGAGTGACCTGCACTTGCTCTTCCTGTGCGTGC
CCCCCAACCGCCGGTACTTTACGCCAGACTGGCATGACTTGGCACGTCGG
TCTCAACGCTGGGCTCCCGAAGTTGCCTCTGTCGCGGCAGCGATCGGCGT
GAGCGAAAGCGCCATAGAACGAGTAGTCAGGCCCCGCAGCACAGGTGGGA
GGAGAAATGGAGGGCTAGGCGAAAGGGGCGATGGGCTCGGTAACGACAAA
AGCGTTGGAGGGCAGGAGGTGAGCTTGTTGCGCCGTTTTGTGTACAGCCT
GGTCCTGCACGACATGCTTCAAGAGGTGCCTCTGCTGCAACTGGAAACGG
GGGGGGTGGGGAGGGGAACGTTACAAGCCCTGCAAAGCGAGGCGAGGATC
TTCTGTGGGATGATCGTCGTGTTTTGTAAGCACCTGCAATGGGTGACGTT
GGCGAGGCTCATTGAGGGCTTGAGCCTGCGCTTGGAGCACCGGGTGGGGG
AAGATCTGCTGCCCTTGTGCCGAATGGGCCCGGAGCTCGTCCATGCCGCC
AGGGCCAGGGCGCTCTTCGAGGCGGGCTTCCAGGCGCCCGAGGACGTTGC
GGCTGCACGTGTGGAAGACGTCGCTGCCGTGTTGCTCACAAGTATGCCCT
TCGCAGCCGAGCATGACAGCGCAAAACCGCGGCAGGGTCCAAAAGACGGT
GGAAGGCAAGGAGGGGGCGATAAGAGGGTGGCCAGACGGATCGCCGACCT
GATCGTGCGCAAGGCGCAAGAGGTTGCGAGGCAAAAAGTAAATCCCTGAA
AATAAAGCGTTCACCACTGACCAAAATAATGAAATAGGCTCGTGTGCTGG
ATGATCATGTGAGCCGTGTGAATAGATGTGGGTCGACAAAAAGGGATGTG
AAATAGAACAATGGATCGTACGTAGACTTGGCCCTGTAAAAGGAAAATTC
CGTGCACACAAAATAAGTCGACCAATGCCCAGTGCAC back to topprotein sequence of rna8074 >rna8074-protein ID=rna8074-protein|Name=rna8074|organism=Nannochloropsis gaditana|type=polypeptide|length=349bp
MPSTSSTSNLDDKQTDTPGPPRKKTTLHHALFIRGPSPPPPPQPSPAPTT
LTSQTPSPSKNQSKHSTSNISAPNSFLHDRGAHPPRAVADAPLTVALPGG
AEGFRAPLLSRNWIHKTGGKVKTEEGLFMAILVDHARIPLPTAESLRRSL
GFDPLAHDSVIFFERKGRRLAGNFGAVVRESWSMWNKAAYECFAARDRGA
AEAFQDFLEGEVFGWLECEACGRWRMYPREDVLLPREGSVFVCDLAYSWN
PAIQGCQTEQEFSIDSVGTGSTNSSTAAPILPAERPAIPKQFEAQIDTAH
AERLGGASSVTARRLLGNSKDEGKQWKERGKGSEGLGEAYGRPPKKKAS back to topmRNA from alignment at KK037247.1:510818..512089- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8074 ID=rna8074|Name=rna8074|organism=Nannochloropsis gaditana|type=mRNA|length=1272bp|location=Sequence derived from alignment at KK037247.1:510818..512089- (Nannochloropsis gaditana)
TTACGTGATCCGTATTTATTTGTATTAATCGACTTCGGGAGGGGATCGTG
GCAAACAATGTGTATGCGTGGTGCCCCTTTTGTCTTTGCACATGGTCAGT
AAGCTCAACCTCCCCGTTTCCAGCTTTGACCCCGGGAGATAATTCCCCAC
GTTACCTCATAGTCAGTGTGGACAGAGTTGGTCTATGCCGTCCACGTCAA
GCACATCAAATCTTGACGACAAACAGACAGATACACCCGGTCCTCCCAGG
AAGAAGACAACCCTCCATCATGCGCTTTTCATCCGGGGGCCTTCCCCACC
CCCTCCGCCCCAGCCCTCGCCTGCGCCTACAACACTTACGTCCCAAACAC
CTTCTCCATCAAAGAATCAGTCCAAACACAGCACGTCCAATATCAGTGCA
CCTAATAGCTTTCTTCACGATCGAGGGGCTCATCCACCGCGCGCCGTCGC
AGACGCACCGCTAACCGTTGCCTTACCGGGAGGCGCCGAGGGCTTTCGTG
CTCCTCTCTTATCCCGCAACTGGATACACAAAACAGGCGGGAAGGTGAAA
ACGGAGGAAGGGCTATTCATGGCCATACTGGTCGACCACGCGCGTATCCC
GCTTCCGACCGCCGAATCTCTCCGTCGATCACTGGGTTTCGACCCGCTGG
CCCATGACTCTGTGATCTTCTTCGAGCGGAAAGGTCGCAGGCTTGCCGGT
AACTTCGGCGCGGTCGTACGTGAAAGCTGGTCCATGTGGAACAAGGCGGC
TTATGAATGCTTCGCAGCCAGGGACAGAGGAGCTGCCGAGGCCTTTCAGG
ATTTCCTGGAAGGCGAGGTGTTTGGATGGCTGGAGTGCGAGGCATGTGGA
CGCTGGCGCATGTATCCCCGCGAGGATGTGCTGCTTCCCAGAGAGGGCTC
CGTTTTTGTCTGCGATCTGGCATACAGCTGGAACCCTGCTATTCAAGGAT
GTCAAACGGAGCAGGAATTTTCGATCGACAGCGTTGGTACGGGCAGTACC
AATTCGAGTACAGCCGCGCCGATCCTGCCAGCGGAAAGGCCGGCGATACC
GAAGCAGTTCGAGGCCCAAATTGACACGGCGCATGCTGAAAGGTTGGGAG
GAGCAAGCTCTGTGACCGCTAGGCGCCTGCTAGGGAATTCCAAGGACGAG
GGGAAGCAATGGAAAGAGAGGGGGAAAGGGAGCGAAGGTCTCGGAGAAGC
TTATGGCCGTCCACCCAAAAAAAAAGCGTCATAGGCGGCTCTACCAAAGA
GCTGTAGCATGTGCACTGGGCA back to topCoding sequence (CDS) from alignment at KK037247.1:510818..512089- >rna8074 ID=rna8074|Name=rna8074|organism=Nannochloropsis gaditana|type=CDS|length=1050bp|location=Sequence derived from alignment at KK037247.1:510818..512089- (Nannochloropsis gaditana)
ATGCCGTCCACGTCAAGCACATCAAATCTTGACGACAAACAGACAGATAC
ACCCGGTCCTCCCAGGAAGAAGACAACCCTCCATCATGCGCTTTTCATCC
GGGGGCCTTCCCCACCCCCTCCGCCCCAGCCCTCGCCTGCGCCTACAACA
CTTACGTCCCAAACACCTTCTCCATCAAAGAATCAGTCCAAACACAGCAC
GTCCAATATCAGTGCACCTAATAGCTTTCTTCACGATCGAGGGGCTCATC
CACCGCGCGCCGTCGCAGACGCACCGCTAACCGTTGCCTTACCGGGAGGC
GCCGAGGGCTTTCGTGCTCCTCTCTTATCCCGCAACTGGATACACAAAAC
AGGCGGGAAGGTGAAAACGGAGGAAGGGCTATTCATGGCCATACTGGTCG
ACCACGCGCGTATCCCGCTTCCGACCGCCGAATCTCTCCGTCGATCACTG
GGTTTCGACCCGCTGGCCCATGACTCTGTGATCTTCTTCGAGCGGAAAGG
TCGCAGGCTTGCCGGTAACTTCGGCGCGGTCGTACGTGAAAGCTGGTCCA
TGTGGAACAAGGCGGCTTATGAATGCTTCGCAGCCAGGGACAGAGGAGCT
GCCGAGGCCTTTCAGGATTTCCTGGAAGGCGAGGTGTTTGGATGGCTGGA
GTGCGAGGCATGTGGACGCTGGCGCATGTATCCCCGCGAGGATGTGCTGC
TTCCCAGAGAGGGCTCCGTTTTTGTCTGCGATCTGGCATACAGCTGGAAC
CCTGCTATTCAAGGATGTCAAACGGAGCAGGAATTTTCGATCGACAGCGT
TGGTACGGGCAGTACCAATTCGAGTACAGCCGCGCCGATCCTGCCAGCGG
AAAGGCCGGCGATACCGAAGCAGTTCGAGGCCCAAATTGACACGGCGCAT
GCTGAAAGGTTGGGAGGAGCAAGCTCTGTGACCGCTAGGCGCCTGCTAGG
GAATTCCAAGGACGAGGGGAAGCAATGGAAAGAGAGGGGGAAAGGGAGCG
AAGGTCTCGGAGAAGCTTATGGCCGTCCACCCAAAAAAAAAGCGTCATAG back to top
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