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Properties
| Property Name | Value |
|---|
| Product | c6 transcription factor |
| Orig transcript id | gnl|cribi|Naga_100023g58.3977.mrna |
| Orig protein id | gnl|cribi|Naga_100023g58.3977 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:491230..494112 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8067 ID=rna8067|Name=rna8067|organism=Nannochloropsis gaditana|type=mRNA|length=3536bp
AAGCGTTCTGGCCCGTCACCATAATGCCGCCCACCCACCACATTGCGAAA
TCATCGTCACACCTCACTCATCACTCGTCACATACATTGCACAGCTTTTA
AAACACCAGCAAATATGCTGCGTGGAGCGCATAGTTGTGTCCTTTAAAGG
GTGGGGAGGAGTACTTTCTCAATTTCACAAGAACAGCTTGGGCGTGCGAC
CAGAATGCTTCGTCTTTCCAGCCGCCTGGCTGTAATACCTTTGCTGCTCA
CAGTCCTGTGCGAGCGATCGACAGCATGGGTCGGACCAGGCCTGGCAAGA
CCTTGCGTCACAGGCTCTTTCGGTTCGCGGATTCAAAATTGGCATCTTCG
ACCTGAGGAGCTGCCGCCGCGACCCAGTTTCCTCACTCTCTCCTCTCCCC
TGGCCTCCGCCAGTGCAACCTCAGGCTCCGAAACGACAACCTCGTCTCCT
GCGGGCGTTCCCATCACGTCTCCCACTACGAATCCACCGCCTTACCCCGC
TGTGGCCGTCCGGCAGGGTTTTTCCGACTTCCGAAGTGACACCGTCACCC
TGCCCACACAGCAAATGCGAAAGGCCATGTCCAAGGCGGAGGTAGGGGAC
GATGTTTTCCGGGAGGATCCCACCGTAGACCAATTAGAAAGGGAAGTTGC
CTCGATTTTGGGCCATGAGGCGGCGCTTTTTGTGCCCTCACGGACCATGG
GGAATCTGATCAGCATCATGATTTGGTGCTCTGCCCGCGGTAGCTCCTTC
ATTTGCGGGGAGAAGAGTCACGTCTTCCTGTGTGAAGAAGGTGGCGCTGC
ACAATTCGGGGGGGTGAGCCCCTTTCCTGTGCCTCATAGCGAGGCGGATG
GGAGTTTGAGCCTGGAGAGCCTCCGGAAGGCCATCGTTGAGGAGTCGAGT
GATGCAAGCCTCGCTCAGCTCATTACGTTGGAAAATCCGGTCGACCGGTG
CGGGGGCCGCGTGTTGAGCACCACTTACCTTGAGTCTGTGGCTGCCCTCG
CGCACGAGCACGGGTTAAAGCTCCACCTGGATGGCTCTCGCATCTGGAAC
GCGGCGGTGGCGGCGGGGGTGGACGTGAAGGAGATGACCAAGCACGCCGA
CAGTGTCACTGTCTGCATGTCCAAGGGGCTTGGGGCACCCGCCGGTTCGC
TCTTGGTCGGGTCGCGCGCCTTCACCGAGAAGGCCCGCAAGCTCCGGAAG
GCTCTGGGCGGGGCCATGCGCCAGGTGGGCGTGCTGGCGGCGGCGGGACT
GGTGGCGCTCAAACGGACCTTGCCGCGCCTGGCGGAGGACCACGAGAACG
CGAGGCGACTGGCCAAAGGGCTCTCCACCCTCCCCGGCCTGAAAGTTAAC
GTGGAAGCGGTCGAGACCAACATCGTGATGATAGACTTCGAGGACCGGCT
CCCGCTGTCCCCGCCCGAGCTCCTGGAGGAGCTAGAGCGGAGGAACGTGC
TTGCACTTGCGGTGGGTCCCCGACGGATCCGGATGGTGACCCACTACGAC
GTTTCGGAGGGGGACATCAAGAAAGCCATCACGGTCTTCGAGAAGGTTCT
TCAGCCTTACAAGGAGCTTTTCCTCAACCCTCCCCCCCCTGCGGCGGCTG
CTGCGGCGGCTGCTGTGGAAGCTGCCGCTTCCGCGCAAGTCGCCGCTGCC
GCTGCAAGAGCGGCCGCCGCAGTGGCTGTAAGCCAGCAACAGGCGGGCAA
TGTGAGCTTGGAGAGAGGGGCCCCGGGGGTGATCGACACCACAGCCACGG
TGGTGGTCAACAACACCCTCCCTGGCCCGACAGCGGCTGGGAGCGCGGCC
GCCGGGCCTGCGTCCCAGGCGGAGGAGACTCTGGTCGACGTGGTGGTGCA
AGGGGTGAGCACGAGCGAACGGGGCTTCGTGGTGGTCTTGGCTGAGAAGG
AAGGAGAGGGGCAGGAGGGCTCGGAGGGCGGGAGGCCGCGAAAGGCCCTG
AAGGTGGTGGTCACGCCCAGCGACCCGATGAGCGCCGGTCTGGACGTACA
CGCAGCTGAGACCCCGGAGGCGATCACTCTCCTCCAATTGCTCCAGGACA
TCGACGTAGGCTCGTACTTGAAGCACGACGCACTCTCGAGTCTGGTCGGA
GTGCGAGCCGGGCACCCCGTCAGCCTCAAGCGGGTAGTGATTGAGCAGTT
GAGTGCGGGGAGGGGGGTGGGAGGGAACAACAGTAACAAGCGTTTCAAGG
CACGCTTGGAGGTGGAAGTGGGAGATATGGAAGGTGCTTCTTCATCCGCG
AACGAACAGGCGCTGAAAGAGGAGGAAAGGGGGGGCAACTCATCGGCTGT
CTCTGCTCCTGCTGGGGCAATTGGAGACAGTGTGCCTCCCACCGGGTCGG
CGGCGCCCACGCGAGTGGTGGAGCCGGAGGTCAAGTCCTCGTTTCAAGCC
ATGGCGCTCGCATTCCGATACAATGCCAGGATGGCCGTTGTCAACAACAT
TCTGGAGGACCCCCTGGTGGCGATCGAGTTTGGGGACTTGCGTGGGATCT
TGCCGGACCTGCTGGAACTGAAACCGGGGGGAATGAAGGCCTCTCCCACG
ACGGTGGCTTCTGCCTTGGACCTGGACGCAGAGTACGAAATACTCCGTCT
GGAGAAGCAGCTGCAGGCGGCTCTGGCAGCCGGAGACCAGGAGGCTGTTG
TGGCGAAGCTCCGAAAGCAGCTGGCCTTGTATGCGCCTGACTTGCAGGAC
TTAGCAGGTTTGGAAAAGGGTTTACCGCTATTGGATTCGGCGACGCCTTC
TTTTTACGCCAACGCCGCGCAAGGTGGCGTGCCAAAGGGGGAGGGAAACC
AGTCTGTAGAAACGAGACATCAGCAGCAACAGCGACAGCAACAGCAACAA
CAGCAGGTGCCGAAACGGGGAAATAATAAGAAGGTTGCGATGTCTCCGCC
CTATATCCCTCCCCCGCCGCTAGATTTGATAGACTCAACGTAATAAGACT
AAGTCCACTGAATGCTATCGACACCAATTGTAAGTGGATGTCGGCACTGA
CTTATCGTACCTCAACTTCGAGACAAGAAAGGTGGGGCCTATCTGCAGTC
ATGCATTGAAGCGAGATCATACGGTCTTCTGATGAGAGACATGTGGGGAC
CGAAGGTTCCGATTCGATCGTATTATAATTTCACATCTGCGTTGCACTCC
TGAGATCTCACCACCTGGAAGATTTTCGTTAAGGAGCAGGCAAGCGCAAG
AAACTTTCAGAGTGGATGGAAACATCTGATGGCGTGTGGCCACCAGGACA
TCTGAGAATGTGCGGGAAAGCAGAACAAATCGTAAAAGGCAAAGAAACGT
GACGTGTACGTTTGTCCGTATGCGAAGAGTGATAATTTGTGAGCGTATCG
GCAAGGACTTTTGACTCTTTTACCGCTGATAGGTTTGATGTTTTCGGGGG
GGCGAGGTATTTATCACGAGGAAAGGCGTATCGAGAAGTCAAGGGGGCCA
GAGGTCTCAGCGTAAAAAGATCTATGAAGCGAGAGGTGTGTACATTTGGT
ATGAAGAAGCAATTTTTTGGTCCGGTGTGCGCAACT back to topprotein sequence of rna8067 >rna8067-protein ID=rna8067-protein|Name=rna8067|organism=Nannochloropsis gaditana|type=polypeptide|length=603bp
MPASVAVGGDGHEPPGASDLRDSAAAGAGKDCTLESTVSHPSTSESSDAV
LAEKQEGEERAILEETQKQSQHQPSLPKRVSDQPGTESSNSCEESTNSPD
MDVQDRREDKGSIERSREETLSLKKMLDRAKGTIKQLNGMLATYEHENGR
LQDYMEALGNKHASGSINHCSTARNLRPFAENRNPPFYPMPAESSKTFCL
PGSNGVPGLMRGPIPSPLFPMYGPEAPRFPLMKGGSGVFGEGPRSPPEDN
GSSFLWRTQRQSLPWQYQQPHQMLSQPQPPASSALSPSAALGLLQFSQPT
SLDSQGSGLPGPGASGTGRKRERAESQTTSPEPPSSNPEPHPPQASSSSG
EGAGEGSEKGGKAETPGPGAGSWGESQEAGTAVTLVSDGKTDEKRFRKSC
DFCTATKIRCDGRKPTCENCDKRLVACHYSEKKRPGPKLSNAFKRERGRV
NTRWGVPLASQTEETHLQPPLLKEPRKGAQAAQPQDQHKQLPAYDQHQLP
QPPCEQQQQQEQQPLHPLHFSMTAPLARAPPPQAGPLPPFATSAMFSHLT
GSYPPPPPPFLPPQSHASLIQRRRTHVQHVLVVPATPLGLPAFRAAHAEQ
DAS back to topmRNA from alignment at KK037247.1:491230..494112- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8067 ID=rna8067|Name=rna8067|organism=Nannochloropsis gaditana|type=mRNA|length=2883bp|location=Sequence derived from alignment at KK037247.1:491230..494112- (Nannochloropsis gaditana)
TTCTGTAAAACAACCCTACAGGCGAAAGCTCTACGGAAAGTTTACCTTTG
GTCGTCGGTATGCCTGCTTCTGTGGCCGTCGGCGGAGATGGTCATGAACC
GCCAGGGGCGTCTGACCTCCGAGACTCGGCTGCCGCGGGCGCGGGTAAGG
ATTGCACTTTGGAATCTACAGTTTCACACCCTTCTACAAGTGAGAGCAGT
GACGCAGTCCTGGCAGAAAAGCAGGAAGGTGAGGAGCGTGCGATTCTTGA
GGAGACGCAGAAACAGTCGCAGCACCAGCCGTCGCTTCCGAAGCGGGTGA
GCGATCAGCCAGGAACCGAGAGCAGCAACAGCTGTGAAGAAAGTACAAAT
AGTCCTGACATGGACGTCCAAGACAGAAGAGAAGATAAAGGCTCGATAGA
GCGCAGTCGAGAGGAGACGCTCTCCCTCAAGAAGATGTTGGACCGCGCGA
AAGGCACCATCAAGCAGCTCAACGGCATGCTGGCCACGTACGAGCACGAG
AACGGGCGCCTGCAAGATTACATGGAGGCTCTGGGCAACAAGCACGCGAG
CGGAAGTATCAACCATTGTAGTACCGCGAGGAACCTCCGGCCTTTCGCTG
AAAATAGAAACCCTCCCTTCTACCCGATGCCCGCCGAGTCTTCTAAGACC
TTCTGCTTGCCCGGCAGCAACGGAGTGCCTGGCCTCATGCGTGGGCCCAT
TCCATCGCCTTTGTTCCCCATGTATGGGCCGGAAGCCCCAAGGTTCCCCC
TCATGAAGGGTGGCTCGGGCGTGTTCGGCGAGGGCCCGCGCTCGCCTCCA
GAAGACAACGGAAGCTCCTTCCTGTGGCGCACCCAGAGGCAGTCCTTGCC
GTGGCAGTATCAGCAACCCCACCAAATGCTCTCACAGCCGCAGCCACCAG
CGTCTTCTGCACTCTCTCCCAGCGCGGCCCTGGGCTTGTTGCAGTTCTCC
CAGCCTACCAGCCTGGACTCCCAGGGGAGCGGCCTCCCAGGGCCGGGAGC
CTCAGGGACCGGCCGTAAACGGGAACGAGCCGAGTCTCAAACCACGTCGC
CGGAGCCACCCAGCTCCAATCCTGAACCCCACCCGCCACAGGCGTCCTCG
AGCAGCGGCGAGGGGGCCGGGGAAGGGAGTGAAAAGGGAGGGAAGGCAGA
GACTCCGGGGCCGGGCGCGGGATCGTGGGGGGAGAGTCAGGAGGCAGGTA
CGGCTGTCACGTTGGTATCGGATGGCAAAACGGACGAGAAGAGATTTCGC
AAATCTTGCGACTTCTGTACTGCCACCAAAATACGCTGCGATGGGCGGAA
GCCGACCTGCGAGAATTGTGACAAGCGTCTGGTTGCCTGCCACTACTCGG
AGAAAAAGAGGCCGGGCCCCAAGCTTAGCAACGCTTTTAAGCGGGAGCGC
GGGAGGGTAAATACGCGTTGGGGTGTCCCCCTCGCCTCGCAAACTGAAGA
AACACACTTACAGCCGCCCTTGTTGAAAGAACCGCGAAAGGGAGCACAGG
CGGCGCAACCGCAAGACCAGCACAAGCAGCTTCCTGCCTACGATCAGCAC
CAGCTCCCGCAGCCTCCCTGTGAGCAACAGCAACAGCAAGAACAACAGCC
GCTGCACCCGCTTCACTTTTCCATGACGGCTCCTCTGGCCCGAGCACCCC
CTCCCCAAGCCGGGCCTCTCCCTCCATTCGCCACCTCCGCCATGTTCTCG
CACTTGACGGGCTCCTATCCGCCCCCCCCCCCTCCCTTCCTCCCCCCCCA
GTCACATGCCAGCCTCATTCAACGCCGGCGCACCCATGTACAGCATGTAC
TCGTCGTCCCAGCAACACCACTCGGCCTTCCCGCATTTCGCGCCGCACAT
GCAGAGCAGGATGCATCATGACCCCTCCATCAGCTTTCCTCAAGGCCCCC
CTCTCCATCCTTTGATGGGCTCCCCGTTGAGCACGGCCACTGACCTCTAC
GCCTCTTACGGTAACATGGGTATGGGCACCGGCAGCATGGCCAACGGGAG
CGGTGGCAACGCCGGCAACTCATTGCTGCCTTTCCCCTTCCTTCCACCGT
CTGCCTACACCGGTGAGAGCGGAGGTCTCCTTGTCCCTCCAAACATGTCT
GCACCAGCATTCTCTTCACTCACAACGACCAAAGGATCGCCGGTCGGGAT
GGAGAACATGATCGAAGAGGCACGCGGACTCGCAGGCCCGTTCCAAGCGC
CTTTGTCCCCCCTCTTCTCCTCCCGCATTCAGTCTCCTGCTGTTGGCGAC
GCACCCCGGGCAGACACTGAAGGAGGGCGCGGAGGGCGTAGTGAGCAGAC
GGGAGCCGTGTCCTCGCTCGTTGGGATGTCTATGCGATAAGGAAGCTGCA
CAGCGGCCCCAACAAGAGTGAGAACGATAGGGAGAAGGAGAAGATTTAGT
AGGAATGTCAGACGTCAATGGAATAGTTTTATAAGAGGGATTAGGCTATA
TCAAAATTTACACATACATTTTTCATAATAGCGAAGCAGGGAGGAAAGAG
TCTTGCTGATTCTAAGTGTTTCTACCTATAGATGTGATACCCTTTACACA
AATGTACACTGTAAGAGCGCGGGAAAAGAGTCGGCCGTGCGGAGAGGAGT
AACGCACAAGGACGCGCCTCTTTTCCTTTGACAGAAGAGAAGTTTAAACA
CAAAGACGTGGACCACAAGTGCTTGCGTATGAGCGATGTAAGGGTAAGTG
CAGATCGGAAAACCAGTGGCTGGACCATGGAAAGCTCATGGCAGGGAGAA
CCTGTACACCTAGAGGGCAACGAGGGATGGGGAAGGCGCCCTGGGCACAC
AAAGCACGAGAGACTCGTACATAGACTGCACAAAGCGTGTAATACCCCGA
CTCAAAAGTATCCATAGCAAGTCATCTAAAGAG back to topCoding sequence (CDS) from alignment at KK037247.1:491230..494112- >rna8067 ID=rna8067|Name=rna8067|organism=Nannochloropsis gaditana|type=CDS|length=1812bp|location=Sequence derived from alignment at KK037247.1:491230..494112- (Nannochloropsis gaditana)
ATGCCTGCTTCTGTGGCCGTCGGCGGAGATGGTCATGAACCGCCAGGGGC
GTCTGACCTCCGAGACTCGGCTGCCGCGGGCGCGGGTAAGGATTGCACTT
TGGAATCTACAGTTTCACACCCTTCTACAAGTGAGAGCAGTGACGCAGTC
CTGGCAGAAAAGCAGGAAGGTGAGGAGCGTGCGATTCTTGAGGAGACGCA
GAAACAGTCGCAGCACCAGCCGTCGCTTCCGAAGCGGGTGAGCGATCAGC
CAGGAACCGAGAGCAGCAACAGCTGTGAAGAAAGTACAAATAGTCCTGAC
ATGGACGTCCAAGACAGAAGAGAAGATAAAGGCTCGATAGAGCGCAGTCG
AGAGGAGACGCTCTCCCTCAAGAAGATGTTGGACCGCGCGAAAGGCACCA
TCAAGCAGCTCAACGGCATGCTGGCCACGTACGAGCACGAGAACGGGCGC
CTGCAAGATTACATGGAGGCTCTGGGCAACAAGCACGCGAGCGGAAGTAT
CAACCATTGTAGTACCGCGAGGAACCTCCGGCCTTTCGCTGAAAATAGAA
ACCCTCCCTTCTACCCGATGCCCGCCGAGTCTTCTAAGACCTTCTGCTTG
CCCGGCAGCAACGGAGTGCCTGGCCTCATGCGTGGGCCCATTCCATCGCC
TTTGTTCCCCATGTATGGGCCGGAAGCCCCAAGGTTCCCCCTCATGAAGG
GTGGCTCGGGCGTGTTCGGCGAGGGCCCGCGCTCGCCTCCAGAAGACAAC
GGAAGCTCCTTCCTGTGGCGCACCCAGAGGCAGTCCTTGCCGTGGCAGTA
TCAGCAACCCCACCAAATGCTCTCACAGCCGCAGCCACCAGCGTCTTCTG
CACTCTCTCCCAGCGCGGCCCTGGGCTTGTTGCAGTTCTCCCAGCCTACC
AGCCTGGACTCCCAGGGGAGCGGCCTCCCAGGGCCGGGAGCCTCAGGGAC
CGGCCGTAAACGGGAACGAGCCGAGTCTCAAACCACGTCGCCGGAGCCAC
CCAGCTCCAATCCTGAACCCCACCCGCCACAGGCGTCCTCGAGCAGCGGC
GAGGGGGCCGGGGAAGGGAGTGAAAAGGGAGGGAAGGCAGAGACTCCGGG
GCCGGGCGCGGGATCGTGGGGGGAGAGTCAGGAGGCAGGTACGGCTGTCA
CGTTGGTATCGGATGGCAAAACGGACGAGAAGAGATTTCGCAAATCTTGC
GACTTCTGTACTGCCACCAAAATACGCTGCGATGGGCGGAAGCCGACCTG
CGAGAATTGTGACAAGCGTCTGGTTGCCTGCCACTACTCGGAGAAAAAGA
GGCCGGGCCCCAAGCTTAGCAACGCTTTTAAGCGGGAGCGCGGGAGGGTA
AATACGCGTTGGGGTGTCCCCCTCGCCTCGCAAACTGAAGAAACACACTT
ACAGCCGCCCTTGTTGAAAGAACCGCGAAAGGGAGCACAGGCGGCGCAAC
CGCAAGACCAGCACAAGCAGCTTCCTGCCTACGATCAGCACCAGCTCCCG
CAGCCTCCCTGTGAGCAACAGCAACAGCAAGAACAACAGCCGCTGCACCC
GCTTCACTTTTCCATGACGGCTCCTCTGGCCCGAGCACCCCCTCCCCAAG
CCGGGCCTCTCCCTCCATTCGCCACCTCCGCCATGTTCTCGCACTTGACG
GGCTCCTATCCGCCCCCCCCCCCTCCCTTCCTCCCCCCCCAGTCACATGC
CAGCCTCATTCAACGCCGGCGCACCCATGTACAGCATGTACTCGTCGTCC
CAGCAACACCACTCGGCCTTCCCGCATTTCGCGCCGCACATGCAGAGCAG
GATGCATCATGA back to top
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