rna806, rna806 (mRNA) Nannochloropsis gaditana

Overview
Namerna806
Unique Namerna806
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length903
Alignment locationCM002456.1:463526..464647 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100106g20.1455.mrna
Orig protein idgnl|cribi|Naga_100106g20.1455
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:463526..464647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g20gene772Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29881.1cds806Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna806rna806-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna806 ID=rna806|Name=rna806|organism=Nannochloropsis gaditana|type=mRNA|length=903bp
ATGGTGACCAGAGAGAATGTCCTGCCTGCCGCGAATGTTTCATATCGCAA
AGGAAAATCAGCTGCACATGTATGGACCAAGGCTCTTGCTGCAGCTGAGC
GGAACGACATCACAACCCTGAACAAGTTATGGGGAATGCCCGAAGGCAAA
TTTATAACTCGAAATTTCCAAGGGGAAAATGGTCATATTTTACATTATGC
CGCAAAGAGGGTGAAGGCGAAGTCCGTGGCTTGGCTTCTTGAACACGGTG
CAGATGTTAATGCAGTCGATCGGGAAGGCGAGACGCCTCTGTGCTGGTGC
GCAACCATCGCCCCTTTCTCCCGCCGCACAGGAGTACTTTTGAAGTTCCT
GATAGAGGCCGGGGCGAACCCCAACCATCAAGACACTCATGGGTATACTC
CTCTCACACACGCAGTGGTTCGTGGTGCTGTCGACGCCGTCCGACGCGCG
CGTGTGGAGATGTTGTTGAAGTTGGGTGCCAACCCTTGTGTTCGGGATCG
GGAGGGGAAACAGCCCTTGGATTACTTAGGCATGTGCACAAATGACGGCC
AGACATGGACAAATGCTCTACCAGAAGACAGGAAAGAGATGGAGCGTTGC
GAGGTTTCGCTGAAAGCCGAGATATTTAGGAGGGAGGTGAGGGAGATCTT
TTGGAGAGAGCGGGTAAGGCGTCAGCGAACGCACGATAAGAGCCTGTGGA
CAGACCTAGAAAAGTGGAAGAGTGGAAACGAAAGGACTGTGCTTTCTGAA
GAGAGCAGAAGAACTCTTCGTGCGCGTGGAATGCAGGCGGAGGATAGGAG
GCGGAAGGATAATCCGCAGGTATCCAACGGGCTGGATGTATCTTGGATAC
TTGTGGATATGGAAGACGATGAAATGTTCTCCAAATGTTTGGGTTTCCTT
TGA
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protein sequence of rna806

>rna806-protein ID=rna806-protein|Name=rna806|organism=Nannochloropsis gaditana|type=polypeptide|length=373bp
MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKES
FIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAF
TDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSS
AANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEG
IGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSS
PNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDI
RQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQ
TAGLQPLVVYFHTLTMRRLAGTA
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mRNA from alignment at CM002456.1:463526..464647-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna806 ID=rna806|Name=rna806|organism=Nannochloropsis gaditana|type=mRNA|length=1122bp|location=Sequence derived from alignment at CM002456.1:463526..464647- (Nannochloropsis gaditana)
ATGGCCTGTTTTTCGTCTTTTCTGCTCGCTCAAGCCGATGCTTTCTCTTC
TCCTCTTCATCCTGGTCAACGGTCGGTCTATGGAGCAGGGCGGCACTACG
TGCAGTCAGCAAAGCAAGCGCCGAGACCCGAAAAGGCTACAAAAGAATCG
TTTATTCAATATGGGGCTGAGCCATCATCCTGGCCTTGTTCTCCTCTGGT
CGATCGTCATCGCCTTCTCAACAACGCTCTGCTAATAGCAGGCGGAAGCA
CTCTGGGGTTATCGTCTCAAATGACCTCCACCCTGCCAGCTTGGGCTTTC
ACTGACGTCAACATACGACACACAGTCAACTACACCGCCTTTCAGAAGAA
GTTTTTCCAAAAACCACCAGGGTTCCTCGCTTATCCTTCGTGGATGGAAG
GGGAATGGCATGTTTCCTGTCGGTTCATTGGAGCGGATTTCCCGTCCTCG
GCTGCCAATTCCAATCCCTTCGTGCCCCGAGAGCGCATTGCGGCGGACAC
CTCCCTGCCGGGTTTCCGGCGCCTAAGCATTGCCATGGTCCCGGACGTGG
GTAAAGACCATGACTTTCGCATGCGATTTCTACGCCCCAACGTGGAAGGC
ATAGGGACGGGGGAGGTGCGGGAGGACAAGGTTTTCAACCTCAAACAAGC
CTTGGAATCTGAACTGGGCAAAGCTACGGTCACCAACATCGACTACAACC
CAGCCAAGAATCCTAACCGCGCTTCCCTTGCTTTGTTGCCAGGTTCCAGC
CCGAATGCGCAGCGGATCGAACTTTTTTGGAACGCCCGCTCGTCTTTGCC
GTCCCCACCATTAGAGACAGACACGACGACAGGGCCACCAGGCAGTAGTA
GCGGCAGCAGCAGCAGCAGTCAGGACGTTTTTCGCTTCGTTGAAGACATT
CGCCAAGTGTCGCTCACGCCGCAGCTTGCCGAGACAAGCTCCGTTGGTGA
CTACCGGCACTTGTGGGAGTTCTACCACATAGGGCCCGAGTCTATCAAAA
CCTACTTATCGACTGTAGCCTACACAACACCCCAAGGTCCACTCTTTCAA
ACGGCGGGGTTGCAGCCACTGGTTGTCTATTTCCATACCTTGACGATGCG
GCGCCTTGCCGGAACAGCGTAG
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Coding sequence (CDS) from alignment at CM002456.1:463526..464647-

>rna806 ID=rna806|Name=rna806|organism=Nannochloropsis gaditana|type=CDS|length=1122bp|location=Sequence derived from alignment at CM002456.1:463526..464647- (Nannochloropsis gaditana)
ATGGCCTGTTTTTCGTCTTTTCTGCTCGCTCAAGCCGATGCTTTCTCTTC
TCCTCTTCATCCTGGTCAACGGTCGGTCTATGGAGCAGGGCGGCACTACG
TGCAGTCAGCAAAGCAAGCGCCGAGACCCGAAAAGGCTACAAAAGAATCG
TTTATTCAATATGGGGCTGAGCCATCATCCTGGCCTTGTTCTCCTCTGGT
CGATCGTCATCGCCTTCTCAACAACGCTCTGCTAATAGCAGGCGGAAGCA
CTCTGGGGTTATCGTCTCAAATGACCTCCACCCTGCCAGCTTGGGCTTTC
ACTGACGTCAACATACGACACACAGTCAACTACACCGCCTTTCAGAAGAA
GTTTTTCCAAAAACCACCAGGGTTCCTCGCTTATCCTTCGTGGATGGAAG
GGGAATGGCATGTTTCCTGTCGGTTCATTGGAGCGGATTTCCCGTCCTCG
GCTGCCAATTCCAATCCCTTCGTGCCCCGAGAGCGCATTGCGGCGGACAC
CTCCCTGCCGGGTTTCCGGCGCCTAAGCATTGCCATGGTCCCGGACGTGG
GTAAAGACCATGACTTTCGCATGCGATTTCTACGCCCCAACGTGGAAGGC
ATAGGGACGGGGGAGGTGCGGGAGGACAAGGTTTTCAACCTCAAACAAGC
CTTGGAATCTGAACTGGGCAAAGCTACGGTCACCAACATCGACTACAACC
CAGCCAAGAATCCTAACCGCGCTTCCCTTGCTTTGTTGCCAGGTTCCAGC
CCGAATGCGCAGCGGATCGAACTTTTTTGGAACGCCCGCTCGTCTTTGCC
GTCCCCACCATTAGAGACAGACACGACGACAGGGCCACCAGGCAGTAGTA
GCGGCAGCAGCAGCAGCAGTCAGGACGTTTTTCGCTTCGTTGAAGACATT
CGCCAAGTGTCGCTCACGCCGCAGCTTGCCGAGACAAGCTCCGTTGGTGA
CTACCGGCACTTGTGGGAGTTCTACCACATAGGGCCCGAGTCTATCAAAA
CCTACTTATCGACTGTAGCCTACACAACACCCCAAGGTCCACTCTTTCAA
ACGGCGGGGTTGCAGCCACTGGTTGTCTATTTCCATACCTTGACGATGCG
GCGCCTTGCCGGAACAGCGTAG
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Synonyms
Publications