EWM29881.1, cds806 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|585112463|gb|EWM29881.1| (hypothetical protein Naga_100106g20 [Nannochloropsis gaditana]) HSP 1 Score: 770.77 bits (1989), Expect = 0.000e+0 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
Query: 1 MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKESFIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRLAGTA 373
MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKESFIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRLAGTA
Sbjct: 1 MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKESFIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRLAGTA 373
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|676382637|ref|XP_009034597.1| (hypothetical protein AURANDRAFT_62188 [Aureococcus anophagefferens] >gi|323455171|gb|EGB11040.1| hypothetical protein AURANDRAFT_62188 [Aureococcus anophagefferens]) HSP 1 Score: 134.42 bits (337), Expect = 6.169e-31 Identity = 89/273 (32.60%), Postives = 134/273 (49.08%), Query Frame = 0
Query: 102 DVNIRHTV---NYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHD-FRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKAT-VTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSL------TPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHT 363
++ +R T+ + +K F PPG AYP+W+EG W F G + PS + ++R+ A+T LPGF +LS+A DVG++ + MRF R +G V ED ++ +L + G A V ++ Y+ AKN NRA++ L PG+ N +RIELF N R S + DVF E++RQV+L P A +G+Y+H + GP++ + + T Y PQ P+F A P+VVY H
Sbjct: 38 ELGLRDTLAARDANLLRKPFIAVPPGPTAYPAWLEGTWRCDAAFAGFELPSKK------ISKQRVVANTDLPGFTKLSVARFGDVGRESTRYEMRFYR-----TPSGAVYEDYARDVASSLNAHAGDARLVESVSYDVAKNANRATVTLRPGTR-NGERIELFVNGRR---------------------SEALGDDVFLSSENVRQVTLGYGTTSNPSAARV-VIGEYQHYATWRRSGPDAARCNVLTAVYVEPQDPMFGDAFDLPVVVYAHN 276
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|551612317|ref|XP_005787191.1| (hypothetical protein EMIHUDRAFT_111129 [Emiliania huxleyi CCMP1516] >gi|485640547|gb|EOD34762.1| hypothetical protein EMIHUDRAFT_111129 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 128.257 bits (321), Expect = 1.126e-30 Identity = 87/264 (32.95%), Postives = 124/264 (46.97%), Query Frame = 0
Query: 123 PGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDH-DFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDY-----NP------AKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTP-QGPLF--QTAGLQPLVVYFHTLTMRRLAG 371
P YP W+ GEW V F G + P +PR+ + A+ +PGF++LSIA +P+VGK+ F MR+ R G VRED+ NL A+ LG + I+Y NP A NPNR L PG + NA RIELF NAR + + +D+F E ++QV+ +PQ S G+Y H + + P + + T AY+ P Q F + G QPL+++ H MR+ G
Sbjct: 66 PAEAKYPDWLVGEWSVEQTFAGYEMPLKDV-----IPRDALMAEGDVPGFKKLSIASLPNVGKEGVRFTMRWARD-----AEGYVREDRAANLNSAIRGGLGYDAIEYIEYKADRGNPGLLGSNAGNPNRVKLVFAPGLTKNADRIELFVNARE---------------------TEAPREDLFYTTEALKQVTFSPQ---RSINGEYCHFISYRRVSPTQVDVVMITAAYSEPLQLERFFQRVGGNQPLILFSHAQRMRKKEG 295
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|224013860|ref|XP_002296594.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968946|gb|EED87290.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 128.642 bits (322), Expect = 1.237e-30 Identity = 91/285 (31.93%), Postives = 142/285 (49.82%), Query Frame = 0
Query: 92 TSTLPAWAFTDVNIRHTV-NYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKD-HDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVS--LTPQLAETSSV-GDYRHL--WEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRL 369
TSTLPA A + + + + + + F PPG YPS++ G+W VS ++ G FPS +P+E++ + ++PGF++LSIAMV DVG++ ++ M N++ G ED+ ++ LG V + Y+ +NPNR S+ +P + NA RIELF+N R E++ T P ++ ++F E IRQV+ L+ + V G+Y H W +K + T AY Q P+F +P+VVY H L RRL
Sbjct: 67 TSTLPANAANGLAFKLSQRDPSQLKNSMFNIPPGVQTYPSFLRGQWDVSSKYRGFIFPSQN------IPKEKLVQNVAIPGFQKLSIAMVGDVGRELTNYSM-----NIDANGL----EDRETTFLTSINGHLGIDAVKEVIYDAKENPNRLSIDFIPQRTRNANRIELFFNGR--------ESELVTTP-------NAYEANIFVCSEYIRQVTFGLSQEFGVARQVIGNYAHFYTWRSQPDDASLVKGNVLTAAYLDAQDPMFFDEPSKPVVVYSHDLVARRL 321
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|1210513887|dbj|GAX27186.1| (hypothetical protein FisN_13Lh264 [Fistulifera solaris]) HSP 1 Score: 125.946 bits (315), Expect = 5.835e-30 Identity = 87/260 (33.46%), Postives = 124/260 (47.69%), Query Frame = 0
Query: 113 AFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVG-------DYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLT 365
A + + F PP YP+WM G W++ F G FPS + +E + D ++ GF++ SIA + DVGK+ + P TG ED+VFNL+Q +++ LG A V + Y+ KNPNR + + + NA+RIELF NAR + ET+ T+ F E IRQV+ S+VG +Y H W + SI+ L T AY PQ PL+ P+V+Y H LT
Sbjct: 59 ALKNRLFNLPPTQQLYPTWMRGLWNIEMSFSGFLFPSQT------ITKETLLRDFAIAGFQKCSIAHIADVGKE-----KVTMPMAIDRETG--WEDRVFNLRQTIDAHLGYAAVQEVLYDGKKNPNRIGINFVNYRTTNAERIELFCNARE---AEEYETNGTS---------------YFVHGEYIRQVT----FGTGSTVGVPRQVSTNYGHFWTWQKESDNSIRGNLLTAAYLDPQDPLYFQEPTLPVVIYSHLLT 283
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|145350776|ref|XP_001419774.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144580006|gb|ABO98067.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 126.331 bits (316), Expect = 1.246e-29 Identity = 90/298 (30.20%), Postives = 135/298 (45.30%), Query Frame = 0
Query: 123 PGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDH--DFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVG-------DYRHLWEFY----------------HIGPESIKTY------LSTVAYTTPQGPLFQTA--------------------GLQPLVVYFHTLTMRRL 369
P AYP W+EGEW + F G +FPS+ V RE +A + + PGF++LS+A PDVG++ ++RMRF R G+V ED+ FNL++ +++ +G+ V ++Y+ ++ NR ++ L G+S NA+RIELF NAR S + S F +E +RQV+ L ++S G DY H+W F IG +K LST Y P L TA +P+V+Y H L + R+
Sbjct: 69 PRAQAYPDWLEGEWRATIDFAGYEFPSA------VVAREAVAREATTPGFQKLSLAYAPDVGREGKTEYRMRFARDG------GDVIEDRGFNLREIVDAYVGEGAVEAVEYDARRDANRTTIRLKRGASNNAERIELFTNARDS--------------------ETRESDGTFFALESLRQVT----LGYSTSYGVARMVPTDYTHVWTFTPLPDVDGVDGASAGEPRIGVTGVKVVNRVKATLSTAGYLQPNDALKYTASDAANPNGAPVPRVGAASQVAFEPVVLYSHVLYLERV 330
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|397594451|gb|EJK56237.1| (hypothetical protein THAOC_23914 [Thalassiosira oceanica]) HSP 1 Score: 126.716 bits (317), Expect = 1.477e-29 Identity = 82/256 (32.03%), Postives = 125/256 (48.83%), Query Frame = 0
Query: 114 FQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVS--LTPQL-AETSSVGDYRHLWEFYHIG-PESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLT 365
+ F PP YP +M G+W V R+ G FPS +P++++ A+ +PGF++LSIA + DVGK+ R + G+ ED+ +L +++S LG V + Y+ NPNR S+ +P + NA RIELF+N R + +S S+S + VF E RQV+ L+ + +V +Y H W + G P+ + L T AY PQ P+F +P+VVY H L
Sbjct: 85 LKNSVFNIPPAAQTYPEFMRGDWDVEMRYRGFVFPSKT------IPKDKLVANVGIPGFQKLSIAQIGDVGKESA-NYRLMIDESTGL------EDRKLSLSSSIDSHLGYEAVREVVYDVKDNPNRLSVDFIPQRTRNANRIELFYNGRDA--------------ELVASTESASGKTVFVCSEFTRQVTFGLSQEFGVARQAVTNYGHFWTWKSGGRPDELTGNLLTAAYLDPQDPMFFDEPSKPVVVYSHDLV 313
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|1210513248|dbj|GAX27645.1| (hypothetical protein FisN_13Hh264 [Fistulifera solaris]) HSP 1 Score: 124.02 bits (310), Expect = 3.104e-29 Identity = 83/260 (31.92%), Postives = 119/260 (45.77%), Query Frame = 0
Query: 113 AFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVG-------DYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLT 365
A + + F PP YP WM G W++ F G FPS + +E + D + GF++ SIA + DVGK+ + I ED++FNL+Q +++ LG V + Y+ KNPNR + + + NA+RIELF NAR + ET+ T+ F E IRQV+ S+VG +Y H W + SI+ L T AY PQ PL+ P+V+Y H LT
Sbjct: 57 ALKNRLFNLPPAQQVYPKWMRGLWNIEMSFSGFLFPSQT------IAKETLLRDFGIAGFQKCSIAHIADVGKEKVMQQM-------AIDRETGWEDRIFNLRQTIDAHLGYTAVQEVVYDGKKNPNRIGINFVDYRTTNAERIELFCNARE---AEEYETNGTS---------------YFVHSEYIRQVT----FGTGSTVGVPRQVSTNYGHFWTWKKESDGSIRGNLLTAAYLDPQDPLYFQEPALPVVIYSHLLT 281
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|303275000|ref|XP_003056810.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226461162|gb|EEH58455.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 124.405 bits (311), Expect = 6.095e-29 Identity = 87/281 (30.96%), Postives = 131/281 (46.62%), Query Frame = 0
Query: 118 FFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVG-KDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGK-ATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSL--TPQLAETSSVG-DYRHLWEFYHI-----GPESIKTYLSTVAYTTPQGPLFQT-------------------AGLQPLVVYFHTLTMRRL 369
F + PG +P W+EG W + F G DFPS N N + + ++PGF+++S+ VPDVG D ++ +RF+R N G G V ED+VFNLK +++ L + V ++Y+ A + NR ++ L PG S NA+RIELF NAR S + +S F E +RQV+L + + V DY+H+W + ++ LST Y P + T A +P V+Y HT+ M R+
Sbjct: 84 FNKARPGPTRFPDWLEGTWRCTSTFEGFDFPSKNINKNALL------KEPTVPGFQKMSLVYVPDVGTSDVEYLVRFVRAN---DGDGGVCEDRVFNLKSIVDAYLKRPDAVEAVEYDAASDANRVTVRLAPGVSNNAERIELFSNARES--------------------ETRASDGTFFAAEALRQVTLGYSKDYNKARVVNTDYQHVWSYTPTYESDGSIRRVRCALSTAGYIQPSDAMRLTAMPNLGGGAPVPSMGNMGNASFEPAVLYSHTIVMERV 335
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|922887709|gb|KOO53222.1| (hypothetical protein Ctob_010400 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 120.939 bits (302), Expect = 1.149e-28 Identity = 78/257 (30.35%), Postives = 119/257 (46.30%), Query Frame = 0
Query: 126 LAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDH-DFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNP-----------AKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSV-GDYRHLWEFYHIGPESIKTYLSTVAYTTP---QGPLFQTAGLQPLVVYFHTLTM 366
LA+P W+EGEW S +F G + P+ +PR+ + + +PGF++LSIA +PDVGK+ ++MR+ G VRED++FN + A+ LG + +DY NPNR L PG +PNA+RIELF N S P G D+F E +RQV+ + +T V G+Y H + + + T Y P + Q +PL+V+ H +++
Sbjct: 3 LAFPKWLEGEWQASQQFAGYELPAKDV-----IPRDALFKEVDVPGFKKLSIAFLPDVGKEGVRYQMRW-----AADAAGVVREDRIFNFRSAIRGGLGYDAIERVDYKTDPNNQFGLGSNTGNPNRLKLVFAPGLTPNAERIELFINEHES-----------EQPEGRD--------DLFYTSEALRQVTFSA--GQTRQVNGEYAHFISYRRVSETQVNAICVTACYADPLQLERFFIQVGPNRPLIVFSHGISL 228 The following BLAST results are available for this feature:
BLAST of EWM29881.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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