EWM29881.1, cds806 (CDS) Nannochloropsis gaditana

Overview
NameEWM29881.1
Unique Namecds806
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:463526..464647 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29881.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100106g20.1455.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:463526..464647 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|585112463|gb|EWM29881.1| (hypothetical protein Naga_100106g20 [Nannochloropsis gaditana])

HSP 1 Score: 770.77 bits (1989), Expect = 0.000e+0
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
Query:    1 MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKESFIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRLAGTA 373
            MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKESFIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRLAGTA
Sbjct:    1 MACFSSFLLAQADAFSSPLHPGQRSVYGAGRHYVQSAKQAPRPEKATKESFIQYGAEPSSWPCSPLVDRHRLLNNALLIAGGSTLGLSSQMTSTLPAWAFTDVNIRHTVNYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRLAGTA 373          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|676382637|ref|XP_009034597.1| (hypothetical protein AURANDRAFT_62188 [Aureococcus anophagefferens] >gi|323455171|gb|EGB11040.1| hypothetical protein AURANDRAFT_62188 [Aureococcus anophagefferens])

HSP 1 Score: 134.42 bits (337), Expect = 6.169e-31
Identity = 89/273 (32.60%), Postives = 134/273 (49.08%), Query Frame = 0
Query:  102 DVNIRHTV---NYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHD-FRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKAT-VTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSL------TPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHT 363
            ++ +R T+   +    +K F   PPG  AYP+W+EG W     F G + PS        + ++R+ A+T LPGF +LS+A   DVG++   + MRF R       +G V ED   ++  +L +  G A  V ++ Y+ AKN NRA++ L PG+  N +RIELF N R                      S +   DVF   E++RQV+L       P  A    +G+Y+H   +   GP++ +  + T  Y  PQ P+F  A   P+VVY H 
Sbjct:   38 ELGLRDTLAARDANLLRKPFIAVPPGPTAYPAWLEGTWRCDAAFAGFELPSKK------ISKQRVVANTDLPGFTKLSVARFGDVGRESTRYEMRFYR-----TPSGAVYEDYARDVASSLNAHAGDARLVESVSYDVAKNANRATVTLRPGTR-NGERIELFVNGRR---------------------SEALGDDVFLSSENVRQVTLGYGTTSNPSAARV-VIGEYQHYATWRRSGPDAARCNVLTAVYVEPQDPMFGDAFDLPVVVYAHN 276          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|551612317|ref|XP_005787191.1| (hypothetical protein EMIHUDRAFT_111129 [Emiliania huxleyi CCMP1516] >gi|485640547|gb|EOD34762.1| hypothetical protein EMIHUDRAFT_111129 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 128.257 bits (321), Expect = 1.126e-30
Identity = 87/264 (32.95%), Postives = 124/264 (46.97%), Query Frame = 0
Query:  123 PGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDH-DFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDY-----NP------AKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVGDYRHLWEFYHIGPESIKTYLSTVAYTTP-QGPLF--QTAGLQPLVVYFHTLTMRRLAG 371
            P    YP W+ GEW V   F G + P         +PR+ + A+  +PGF++LSIA +P+VGK+   F MR+ R        G VRED+  NL  A+   LG   +  I+Y     NP      A NPNR  L   PG + NA RIELF NAR                      + +  +D+F   E ++QV+ +PQ    S  G+Y H   +  + P  +   + T AY+ P Q   F  +  G QPL+++ H   MR+  G
Sbjct:   66 PAEAKYPDWLVGEWSVEQTFAGYEMPLKDV-----IPRDALMAEGDVPGFKKLSIASLPNVGKEGVRFTMRWARD-----AEGYVREDRAANLNSAIRGGLGYDAIEYIEYKADRGNPGLLGSNAGNPNRVKLVFAPGLTKNADRIELFVNARE---------------------TEAPREDLFYTTEALKQVTFSPQ---RSINGEYCHFISYRRVSPTQVDVVMITAAYSEPLQLERFFQRVGGNQPLILFSHAQRMRKKEG 295          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|224013860|ref|XP_002296594.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968946|gb|EED87290.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 128.642 bits (322), Expect = 1.237e-30
Identity = 91/285 (31.93%), Postives = 142/285 (49.82%), Query Frame = 0
Query:   92 TSTLPAWAFTDVNIRHTV-NYTAFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKD-HDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVS--LTPQLAETSSV-GDYRHL--WEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLTMRRL 369
            TSTLPA A   +  + +  + +  +   F  PPG   YPS++ G+W VS ++ G  FPS        +P+E++  + ++PGF++LSIAMV DVG++  ++ M     N++  G     ED+      ++   LG   V  + Y+  +NPNR S+  +P  + NA RIELF+N R        E++  T P       ++   ++F   E IRQV+  L+ +      V G+Y H   W         +K  + T AY   Q P+F     +P+VVY H L  RRL
Sbjct:   67 TSTLPANAANGLAFKLSQRDPSQLKNSMFNIPPGVQTYPSFLRGQWDVSSKYRGFIFPSQN------IPKEKLVQNVAIPGFQKLSIAMVGDVGRELTNYSM-----NIDANGL----EDRETTFLTSINGHLGIDAVKEVIYDAKENPNRLSIDFIPQRTRNANRIELFFNGR--------ESELVTTP-------NAYEANIFVCSEYIRQVTFGLSQEFGVARQVIGNYAHFYTWRSQPDDASLVKGNVLTAAYLDAQDPMFFDEPSKPVVVYSHDLVARRL 321          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|1210513887|dbj|GAX27186.1| (hypothetical protein FisN_13Lh264 [Fistulifera solaris])

HSP 1 Score: 125.946 bits (315), Expect = 5.835e-30
Identity = 87/260 (33.46%), Postives = 124/260 (47.69%), Query Frame = 0
Query:  113 AFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVG-------DYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLT 365
            A + + F  PP    YP+WM G W++   F G  FPS        + +E +  D ++ GF++ SIA + DVGK+     +   P      TG   ED+VFNL+Q +++ LG A V  + Y+  KNPNR  +  +   + NA+RIELF NAR    +   ET+ T+                F   E IRQV+        S+VG       +Y H W +      SI+  L T AY  PQ PL+      P+V+Y H LT
Sbjct:   59 ALKNRLFNLPPTQQLYPTWMRGLWNIEMSFSGFLFPSQT------ITKETLLRDFAIAGFQKCSIAHIADVGKE-----KVTMPMAIDRETG--WEDRVFNLRQTIDAHLGYAAVQEVLYDGKKNPNRIGINFVNYRTTNAERIELFCNARE---AEEYETNGTS---------------YFVHGEYIRQVT----FGTGSTVGVPRQVSTNYGHFWTWQKESDNSIRGNLLTAAYLDPQDPLYFQEPTLPVVIYSHLLT 283          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|145350776|ref|XP_001419774.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144580006|gb|ABO98067.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 126.331 bits (316), Expect = 1.246e-29
Identity = 90/298 (30.20%), Postives = 135/298 (45.30%), Query Frame = 0
Query:  123 PGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDH--DFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVG-------DYRHLWEFY----------------HIGPESIKTY------LSTVAYTTPQGPLFQTA--------------------GLQPLVVYFHTLTMRRL 369
            P   AYP W+EGEW  +  F G +FPS+       V RE +A + + PGF++LS+A  PDVG++   ++RMRF R        G+V ED+ FNL++ +++ +G+  V  ++Y+  ++ NR ++ L  G+S NA+RIELF NAR S                     +  S   F  +E +RQV+    L  ++S G       DY H+W F                  IG   +K        LST  Y  P   L  TA                      +P+V+Y H L + R+
Sbjct:   69 PRAQAYPDWLEGEWRATIDFAGYEFPSA------VVAREAVAREATTPGFQKLSLAYAPDVGREGKTEYRMRFARDG------GDVIEDRGFNLREIVDAYVGEGAVEAVEYDARRDANRTTIRLKRGASNNAERIELFTNARDS--------------------ETRESDGTFFALESLRQVT----LGYSTSYGVARMVPTDYTHVWTFTPLPDVDGVDGASAGEPRIGVTGVKVVNRVKATLSTAGYLQPNDALKYTASDAANPNGAPVPRVGAASQVAFEPVVLYSHVLYLERV 330          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|397594451|gb|EJK56237.1| (hypothetical protein THAOC_23914 [Thalassiosira oceanica])

HSP 1 Score: 126.716 bits (317), Expect = 1.477e-29
Identity = 82/256 (32.03%), Postives = 125/256 (48.83%), Query Frame = 0
Query:  114 FQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVS--LTPQL-AETSSVGDYRHLWEFYHIG-PESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLT 365
             +   F  PP    YP +M G+W V  R+ G  FPS        +P++++ A+  +PGF++LSIA + DVGK+     R +     G+      ED+  +L  +++S LG   V  + Y+   NPNR S+  +P  + NA RIELF+N R +                 +S  S+S + VF   E  RQV+  L+ +      +V +Y H W +   G P+ +   L T AY  PQ P+F     +P+VVY H L 
Sbjct:   85 LKNSVFNIPPAAQTYPEFMRGDWDVEMRYRGFVFPSKT------IPKDKLVANVGIPGFQKLSIAQIGDVGKESA-NYRLMIDESTGL------EDRKLSLSSSIDSHLGYEAVREVVYDVKDNPNRLSVDFIPQRTRNANRIELFYNGRDA--------------ELVASTESASGKTVFVCSEFTRQVTFGLSQEFGVARQAVTNYGHFWTWKSGGRPDELTGNLLTAAYLDPQDPMFFDEPSKPVVVYSHDLV 313          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|1210513248|dbj|GAX27645.1| (hypothetical protein FisN_13Hh264 [Fistulifera solaris])

HSP 1 Score: 124.02 bits (310), Expect = 3.104e-29
Identity = 83/260 (31.92%), Postives = 119/260 (45.77%), Query Frame = 0
Query:  113 AFQKKFFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSVG-------DYRHLWEFYHIGPESIKTYLSTVAYTTPQGPLFQTAGLQPLVVYFHTLT 365
            A + + F  PP    YP WM G W++   F G  FPS        + +E +  D  + GF++ SIA + DVGK+   +          I      ED++FNL+Q +++ LG   V  + Y+  KNPNR  +  +   + NA+RIELF NAR    +   ET+ T+                F   E IRQV+        S+VG       +Y H W +      SI+  L T AY  PQ PL+      P+V+Y H LT
Sbjct:   57 ALKNRLFNLPPAQQVYPKWMRGLWNIEMSFSGFLFPSQT------IAKETLLRDFGIAGFQKCSIAHIADVGKEKVMQQM-------AIDRETGWEDRIFNLRQTIDAHLGYTAVQEVVYDGKKNPNRIGINFVDYRTTNAERIELFCNARE---AEEYETNGTS---------------YFVHSEYIRQVT----FGTGSTVGVPRQVSTNYGHFWTWKKESDGSIRGNLLTAAYLDPQDPLYFQEPALPVVIYSHLLT 281          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|303275000|ref|XP_003056810.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226461162|gb|EEH58455.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 124.405 bits (311), Expect = 6.095e-29
Identity = 87/281 (30.96%), Postives = 131/281 (46.62%), Query Frame = 0
Query:  118 FFQKPPGFLAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVG-KDHDFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGK-ATVTNIDYNPAKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSL--TPQLAETSSVG-DYRHLWEFYHI-----GPESIKTYLSTVAYTTPQGPLFQT-------------------AGLQPLVVYFHTLTMRRL 369
            F +  PG   +P W+EG W  +  F G DFPS   N N  +       + ++PGF+++S+  VPDVG  D ++ +RF+R N    G G V ED+VFNLK  +++ L +   V  ++Y+ A + NR ++ L PG S NA+RIELF NAR S                     + +S   F   E +RQV+L  +    +   V  DY+H+W +            ++  LST  Y  P   +  T                   A  +P V+Y HT+ M R+
Sbjct:   84 FNKARPGPTRFPDWLEGTWRCTSTFEGFDFPSKNINKNALL------KEPTVPGFQKMSLVYVPDVGTSDVEYLVRFVRAN---DGDGGVCEDRVFNLKSIVDAYLKRPDAVEAVEYDAASDANRVTVRLAPGVSNNAERIELFSNARES--------------------ETRASDGTFFAAEALRQVTLGYSKDYNKARVVNTDYQHVWSYTPTYESDGSIRRVRCALSTAGYIQPSDAMRLTAMPNLGGGAPVPSMGNMGNASFEPAVLYSHTIVMERV 335          
BLAST of EWM29881.1 vs. NCBI_GenBank
Match: gi|922887709|gb|KOO53222.1| (hypothetical protein Ctob_010400 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 120.939 bits (302), Expect = 1.149e-28
Identity = 78/257 (30.35%), Postives = 119/257 (46.30%), Query Frame = 0
Query:  126 LAYPSWMEGEWHVSCRFIGADFPSSAANSNPFVPRERIAADTSLPGFRRLSIAMVPDVGKDH-DFRMRFLRPNVEGIGTGEVREDKVFNLKQALESELGKATVTNIDYNP-----------AKNPNRASLALLPGSSPNAQRIELFWNARSSLPSPPLETDTTTGPPGSSSGSSSSSQDVFRFVEDIRQVSLTPQLAETSSV-GDYRHLWEFYHIGPESIKTYLSTVAYTTP---QGPLFQTAGLQPLVVYFHTLTM 366
            LA+P W+EGEW  S +F G + P+        +PR+ +  +  +PGF++LSIA +PDVGK+   ++MR+          G VRED++FN + A+   LG   +  +DY               NPNR  L   PG +PNA+RIELF N   S             P G          D+F   E +RQV+ +    +T  V G+Y H   +  +    +     T  Y  P   +    Q    +PL+V+ H +++
Sbjct:    3 LAFPKWLEGEWQASQQFAGYELPAKDV-----IPRDALFKEVDVPGFKKLSIAFLPDVGKEGVRYQMRW-----AADAAGVVREDRIFNFRSAIRGGLGYDAIERVDYKTDPNNQFGLGSNTGNPNRLKLVFAPGLTPNAERIELFINEHES-----------EQPEGRD--------DLFYTSEALRQVTFSA--GQTRQVNGEYAHFISYRRVSETQVNAICVTACYADPLQLERFFIQVGPNRPLIVFSHGISL 228          
The following BLAST results are available for this feature:
BLAST of EWM29881.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112463|gb|EWM29881.1|0.000e+0100.00hypothetical protein Naga_100106g20 [Nannochlorops... [more]
gi|676382637|ref|XP_009034597.1|6.169e-3132.60hypothetical protein AURANDRAFT_62188 [Aureococcus... [more]
gi|551612317|ref|XP_005787191.1|1.126e-3032.95hypothetical protein EMIHUDRAFT_111129 [Emiliania ... [more]
gi|224013860|ref|XP_002296594.1|1.237e-3031.93predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210513887|dbj|GAX27186.1|5.835e-3033.46hypothetical protein FisN_13Lh264 [Fistulifera sol... [more]
gi|145350776|ref|XP_001419774.1|1.246e-2930.20predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|397594451|gb|EJK56237.1|1.477e-2932.03hypothetical protein THAOC_23914 [Thalassiosira oc... [more]
gi|1210513248|dbj|GAX27645.1|3.104e-2931.92hypothetical protein FisN_13Hh264 [Fistulifera sol... [more]
gi|303275000|ref|XP_003056810.1|6.095e-2930.96predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|922887709|gb|KOO53222.1|1.149e-2830.35hypothetical protein Ctob_010400 [Chrysochromulina... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna806rna806Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications