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Properties
| Property Name | Value |
|---|
| Product | trehalose-6-phosphate synthase |
| Orig transcript id | gnl|cribi|Naga_100023g46.3947.mrna |
| Orig protein id | gnl|cribi|Naga_100023g46.3947 |
| Gene | TPS |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:457652..461443 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8057 ID=rna8057|Name=rna8057|organism=Nannochloropsis gaditana|type=mRNA|length=2018bp
CGCACACTGCGGCATAAAAAAAAAGTCTCGCGGGGGGGGGTTCCACTTCA
CATAATTGTTGTCATGGATATTCTCCCAAGCATGTCCCCGAAGGATAGCA
GCAATCTCTGACCGGTACACTGACAAATTCGCCTCCCCGTCAAATTCCCT
CCTGCCTCCCTGTCGGACCTACAGAAAAAGAGGAAGTCAACATGTCCCGC
AGTCTAAATTACAACCAGGCAGCAGGCCTGCAGGGCATGTTGAAGGAGGG
CAGTAAGAGCTTAGAAGGCGTGGACGAAGCAGTGATTCGCAATATTGAGG
CGGCAAAGCAGCTGGCAGGCATTTGTAGTTCCTCCATGGGGCCGAATGGC
TTAAAAAAATTGGTGGTCAATCACCTGGAAAAGATAATTGTTACAAGTGA
TTGTGCAACAATATTGAAGGAGTTGGAAGTGCAGCATCCCGCAGCGAAAA
TGTTGGTGATGGCGGCTATGATGCAGGAGAAGGAGTGCGGAGATGCCACG
AATTTCACAGTCTCCTTCGCCGGCGAGCTCTTAAAGAAGGCCGAGGATCT
GCTGCATAAAGGGCTACACACGAGCGAAATTGTGGCAGGATACAGAGTAG
CTTTTGATAAAGCGATGGAAATATTGCCCACTTTAACGACACACACAGTC
CAGGATCCGCGAGACGCACAGCAAGTAATCCGCGTGCTGGAGTCAGTATT
GGGTACCAAATACTTTGGCTATGAGGGCACGCTTGCCCCGTACGTCGCGC
AGGCATGTCAAGCTGTCATGCCACCGGCACCGCGGAAGCCCTCTTTAAAT
GTGGACTCGGTACGGGTCTGTAAGCTGATGGGCGGCACCATAGGGGACAG
CCTGGTCATGAAGGGCGTCGTGGTCTCGCGCAACACGGAGGGCACCATCA
AGCGCGCTCTGAAGGCCAAGGTTGCGGTCTTCGGCTGCGGCATAGAGGCG
TCGTCTACGGAGACGAAAGGCACGGTCCTGATTCGAAATGCGGAGGAGCT
TCTTAACTACAACAAGGGCGAGGAGAAGCTGATGGAAGACATCATCAAGT
CCATCGCCGACTCGGGGGTGCAGGTGCTGGTCACGGGCGGCTCTATCTCT
GAAATGGCCTTGCACTTCCTGGAACGCTACAAGCTCATGGTGGTGAAGAT
TCAGTCAAAGTGGGAACTGCGACGGCTCTGCGGGGCGGTGAACGCCACGG
CGCTGGTCCGCCTGGGGGCCCCCACGCCCGAGGAGGCCGGCTTTGTGGAC
CGAGCCGAGGTGCGGGAGGTGGGGGGCAGGAAGGTGACGGTCTTCGAGCA
GGAGGCGGAGGAGTCGCGCGTGGCCTCCATCATTCTCCGTGCCAGCACGC
AGAACGTGCTCGAGGATCTGGAGCGGGCCGTGGACGACGGCGTGAACACG
GTCAAGGTGCTCTGCCAGGACGGGCGATTCCTCCCCGGGGCCGGAGCGGT
GGAGATCGAGCTGGCCCGGCGCATCGCCAAACTTGCGGATGCCTCGACCG
GCTTGGATCAGTACGCGATGCGGAAATTTGCGGAGGCGTTGGAGGTGGTG
CCAAGGACGCTGGCAGAGAGCTCAGGGCAGGAGGCAACGGACACCGTCAC
AGCCCTCTACGCCGAGCATGAGAAGGGCAAGTTGGGCGTTGGGGTGGACG
CCGAGGGCGCAGGGGTGGGGGACAAAGGGGTGCTGGACTCCCTGGCGGTG
AAAGACTCGGCGCTGCGGCTGGCGGTGGACGCAGCCTTGACAGTCCTGCG
CGTGGACCAGATCATCATGTCCAAACCCGCGGGGGGGCCCAAGCCGCCCT
CTGGGGGAGGGGGGGACGAGGACTAGGTGGGGAACAGGCAGGTACCGCGA
CTCCGGCGGGAGGTGGAAGGGTGCAAAAGCGGCGGGAGCGTCGTGGCATG
GGTGACTGTCACCAGAGTCACGGCCATCCCAAGAGAGACGAGCAAGAGTC
AGGGAGATGGATCCCGCATGACGCGCCGGATACTTAAGAAGAAAAGGGGA
CAATGGATTCTCGTTTGG back to topprotein sequence of rna8057 >rna8057-protein ID=rna8057-protein|Name=rna8057|organism=Nannochloropsis gaditana|type=polypeptide|length=840bp
MLTFWVGTVSASDLSEADKQEIRALLEPMRCHPIFMPREMIEGHYHGYCK
KVMWPLFHNVEMLDSCGADWNYKADGRAWDPASVWAVGGKEHWWGTYCQV
NRIFRDVVVEVCKLEEGDVLWVHDYHLMLLPSLVSAHEERVHRHRKCSII
FFLHIPFPTSQIFRALYCGEDLLKGMLSADVIGFHAFDHARHFLNACKRI
LGLSYFNKSGGLIGIELETRTVTVLISHVGIEGSLLTKAMATARVQEETA
ALRHKHKGKLLIAGLDISQRLSGIALKLLAFERLLTEYECYRDRVVMVQR
SLLTGSRAEDEEATTAEVRELVARVNAKFGPVIDYQELRSNRLPREDRIA
LWLASDVLVIAAIREGLNLHPLEFTFVKQGEEHPPGVVLASEFSACSSLL
NGALRINPFDIKRVVVSLDHAIRLELQERLSRRDRDLPYISERPSSLWTR
QVLQDLWAAKAETPELLKRDTGGVRVQYQPVWQTSHNHLRETEVEGAYSK
ATRRFIFTDFGGTLMEKEKVDLYIKRSFTQTTGKRPSPSVMESLRLLSAD
PKNEVFIISGLQLLPLEEVFGHLDRIGLAAANGLYLSMPQESDADKESLS
TTPRSVPPGSHPEDASGLPQQHKGKKRSWSLLDYGVKWAEVKDIALPILE
RYTARTNGSSVRLRDPGIAWSYYSTDPEWGLMQAKSVIAELEEALAAHDV
KVVHLKGMVEIVPKRLNKGVVLRYAIQSKEGPSPDFIMCMGDDASDEYMF
TSLYSYLSETAETELARSHKAYDAAAAAAADGSEPVQGLSQRRPSQQAEE
EITKYVFTCSVGKHRSHASFYVHNVEEVRKLLEGLAALSS back to topmRNA from alignment at KK037247.1:457652..461443- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8057 ID=rna8057|Name=rna8057|organism=Nannochloropsis gaditana|type=mRNA|length=3792bp|location=Sequence derived from alignment at KK037247.1:457652..461443- (Nannochloropsis gaditana)
GTACAGGCGAGTGTCAGTGTCCCGTGCTGTCTGCCCTTGGGCACACGCTG
TTCGATATCAGCCATGTCGTCGCAGTACAGCATCGTCCACCTCAAAGTGC
GGGCTGAGGCAGAGTTTGGGCAGGTCGTGCACGTGTCGGGAAGTTCCTTC
ACCATGGGCAATTTTAGCACGGCCGAGGTAAGATTGTTGGTTTGAAAGGG
TGGAGGGCCGTTTGTACGGGCATGGAGAGTCACGTGGCGGGCAGTGAAAG
GTCTTAGCGTTGAGGGGGGTGCTCGAGGATTGGGGGCTTGCCACGCAACC
GTCTAGCATATTCATGGACGGGCGCATACGGCACGTAGAACAATTCGTTC
GACGACCGGATTGAGGCATGAGAATCACCCTTGGAATTTCCTGACAGGCC
GTCCCTCTGGTCACCAGTCCTGAGGAATACCCCGTGTGGCGTACCTTCAA
GCCCCTGGTCGTGCCGCGGGGCATACCGCAGGCATACAAGTATGCCATCT
TCGAGGGGGGGCACTTCAAGCGCTGGGAGGCCCTGGAAATTCCCCGTGTC
ATTTGCGTGGACGACTTCCACGTGGAGCTGTCGGACGTGCTGGACGAGCC
GGCGGAGGCTGACGACGCCCACGCCCCGCTCACGCCCAGCGCCATAGCCA
AGCGCGAGGCGATCAACCGCATCCGCCGCACTCTCTCCCAGACGGTGGAG
CTGACGGAGGACGCCGCCTCTCTGGATGCCCGCAAGCTCCTGGAGACGTC
GACCAAGGAGCATTCCCCCCCGCCCGGCTCCCACCTTTACCTGGTCTGTT
TCCATCTGCCCGTGACCATCGCCAAGGACGCAGGCGGGGCCTGGACGGCG
GAGTGGAACGAGAGCCTGATCGCCAAGACCGACCATTCCATCTCCTCGGA
CATGCTCACCTTCTGGGTCGGGACCGTCTCGGCGTCGGACCTGAGCGAGG
CGGACAAGCAGGAGATCCGGGCCCTGCTCGAGCCCATGCGCTGCCACCCC
ATCTTCATGCCGCGGGAGATGATCGAGGGCCACTACCACGGGTACTGCAA
GAAGGTCATGTGGCCGCTCTTCCACAACGTGGAGATGCTGGACTCGTGCG
GGGCGGACTGGAACTACAAGGCGGACGGCCGGGCCTGGGACCCGGCCTCC
GTGTGGGCCGTGGGCGGCAAGGAGCATTGGTGGGGCACCTACTGCCAGGT
GAACCGGATCTTCCGCGACGTGGTGGTGGAGGTCTGCAAGCTGGAGGAGG
GCGACGTGCTGTGGGTCCACGACTACCATCTGATGCTTCTCCCCTCCCTC
GTCTCCGCCCACGAAGAGCGGGTCCACCGGCACCGCAAGTGCTCCATCAT
CTTCTTCCTCCACATCCCCTTTCCCACCAGCCAGATCTTCCGCGCTCTTT
ACTGCGGGGAGGACCTGCTGAAGGGCATGCTCTCGGCGGACGTGATCGGC
TTCCACGCCTTCGACCACGCCCGCCACTTCCTGAACGCCTGCAAGCGCAT
CCTGGGGCTCTCCTATTTCAACAAGAGCGGGGGCCTCATCGGGATCGAGC
TGGAGACGCGGACGGTCACGGTCTTGATCTCGCACGTGGGCATCGAGGGC
TCTCTCCTCACCAAGGCCATGGCCACGGCGCGCGTGCAGGAGGAGACCGC
CGCCCTCCGGCACAAGCACAAAGGCAAGCTCCTGATCGCGGGGCTGGACA
TCTCCCAGCGCCTGAGCGGGATTGCCCTGAAGCTCCTGGCCTTCGAGCGG
CTCTTGACGGAGTACGAGTGCTACCGGGATCGCGTGGTCATGGTCCAGCG
CTCCCTCCTGACCGGCAGCCGGGCTGAGGACGAGGAGGCGACCACGGCCG
AGGTCCGCGAGCTGGTGGCGCGCGTCAACGCGAAGTTCGGACCCGTCATC
GACTACCAGGAGCTCCGTTCTAACCGGCTTCCCAGGGAGGATCGGATCGC
CCTCTGGCTGGCTTCGGATGTCCTGGTCATCGCCGCCATCCGGGAGGGTC
TGAACCTGCACCCGCTCGAGTTCACTTTTGTCAAGCAGGGCGAAGAGCAC
CCTCCCGGCGTGGTCCTTGCCTCCGAGTTCTCTGCCTGCTCCTCCTTGCT
CAATGGGGCCCTGCGCATCAACCCCTTCGACATCAAACGGGTGGTGGTCT
CCTTGGATCACGCCATCCGCTTAGAGCTGCAAGAGCGCCTGAGCCGACGA
GACCGAGACTTGCCCTACATCTCGGAGCGCCCCTCCTCCCTGTGGACGCG
CCAAGTGCTGCAAGATCTATGGGCCGCCAAGGCGGAGACGCCCGAGCTTC
TTAAAAGGGATACGGGGGGAGTGCGTGTCCAGTACCAGCCCGTCTGGCAA
ACCTCCCACAATCACCTCCGGGAGACGGAGGTGGAGGGCGCCTACAGTAA
GGCGACTCGCAGGTTCATCTTCACGGACTTCGGGGGCACTCTGATGGAGA
AGGAGAAGGTGGATTTGTACATCAAGCGCTCCTTCACCCAGACCACCGGC
AAGCGGCCCTCGCCCTCCGTGATGGAGTCCCTGCGCCTCCTCTCCGCCGA
CCCCAAGAATGAGGTCTTTATCATCAGCGGCCTCCAACTCCTGCCTCTGG
AGGAGGTCTTCGGCCACCTCGACCGCATCGGCCTGGCGGCGGCCAACGGC
CTGTACCTGTCCATGCCACAAGAATCGGACGCAGACAAGGAGTCTCTGTC
GACCACCCCTCGGTCCGTTCCTCCCGGATCGCACCCTGAGGACGCGAGCG
GCCTTCCCCAGCAGCACAAGGGCAAGAAGCGATCCTGGAGCCTCTTGGAC
TACGGCGTGAAGTGGGCCGAGGTCAAGGACATTGCCTTGCCCATCCTGGA
GCGATACACGGCGCGCACCAACGGGAGCAGCGTCCGCCTCCGGGACCCCG
GGATCGCCTGGAGCTACTACTCGACTGACCCCGAGTGGGGCCTGATGCAG
GCCAAGTCGGTGATCGCCGAGTTGGAGGAGGCCTTGGCCGCGCACGATGT
GAAGGTGGTGCACCTGAAGGGGATGGTGGAGATCGTTCCCAAGCGCTTGA
ACAAGGGCGTGGTCCTCCGGTATGCCATCCAGAGCAAGGAGGGCCCCTCC
CCAGACTTCATCATGTGCATGGGCGACGATGCCAGCGACGAGTATATGTT
CACCTCGCTGTATTCCTACCTCTCCGAGACCGCCGAGACGGAGCTCGCGC
GCTCTCACAAGGCCTACGACGCAGCCGCGGCCGCAGCTGCCGATGGAAGT
GAGCCTGTTCAGGGGCTGTCACAACGTCGACCCTCGCAGCAGGCGGAGGA
AGAGATTACCAAATACGTGTTCACCTGCTCTGTGGGCAAACATCGATCGC
ATGCCTCGTTCTACGTGCACAATGTGGAGGAGGTGCGCAAACTGTTGGAA
GGATTAGCGGCATTGTCCTCTTGAGAAGGAGGGGAGGCAGGGGTGAGCAT
GGCCCTGGGCGGAGAGGGACTGGCGGGCAGCCTGTACAGTTGTGAGAGTA
GCGGTACTGTGTGTTTAAGGGAGTGCATGTGTGTGTGTGTGGATGTCAGT
GACTGTGTACGTTCGCTTGATGTTGGATGGATTGGTCTACAGAGGACGTT
TCAGAAGCCTCTGACGTTCAGATTGGATGAAAAGAAGTGGCCACAAGCCC
AGCAAGCTGTCGCTGTGCTATGCATGTGCGAGGTTAAGTCAAGACGCGAA
AGCGCTTTCAATTCAAAAGCTTCGGCCAAACGAGAATCCATTGTCCCCTT
TTCTTCTTAAGTATCCGGCGCGTCATGCGGGATCCATCTCCC back to topCoding sequence (CDS) from alignment at KK037247.1:457652..461443- >rna8057 ID=rna8057|Name=rna8057|organism=Nannochloropsis gaditana|type=CDS|length=2523bp|location=Sequence derived from alignment at KK037247.1:457652..461443- (Nannochloropsis gaditana)
ATGCTCACCTTCTGGGTCGGGACCGTCTCGGCGTCGGACCTGAGCGAGGC
GGACAAGCAGGAGATCCGGGCCCTGCTCGAGCCCATGCGCTGCCACCCCA
TCTTCATGCCGCGGGAGATGATCGAGGGCCACTACCACGGGTACTGCAAG
AAGGTCATGTGGCCGCTCTTCCACAACGTGGAGATGCTGGACTCGTGCGG
GGCGGACTGGAACTACAAGGCGGACGGCCGGGCCTGGGACCCGGCCTCCG
TGTGGGCCGTGGGCGGCAAGGAGCATTGGTGGGGCACCTACTGCCAGGTG
AACCGGATCTTCCGCGACGTGGTGGTGGAGGTCTGCAAGCTGGAGGAGGG
CGACGTGCTGTGGGTCCACGACTACCATCTGATGCTTCTCCCCTCCCTCG
TCTCCGCCCACGAAGAGCGGGTCCACCGGCACCGCAAGTGCTCCATCATC
TTCTTCCTCCACATCCCCTTTCCCACCAGCCAGATCTTCCGCGCTCTTTA
CTGCGGGGAGGACCTGCTGAAGGGCATGCTCTCGGCGGACGTGATCGGCT
TCCACGCCTTCGACCACGCCCGCCACTTCCTGAACGCCTGCAAGCGCATC
CTGGGGCTCTCCTATTTCAACAAGAGCGGGGGCCTCATCGGGATCGAGCT
GGAGACGCGGACGGTCACGGTCTTGATCTCGCACGTGGGCATCGAGGGCT
CTCTCCTCACCAAGGCCATGGCCACGGCGCGCGTGCAGGAGGAGACCGCC
GCCCTCCGGCACAAGCACAAAGGCAAGCTCCTGATCGCGGGGCTGGACAT
CTCCCAGCGCCTGAGCGGGATTGCCCTGAAGCTCCTGGCCTTCGAGCGGC
TCTTGACGGAGTACGAGTGCTACCGGGATCGCGTGGTCATGGTCCAGCGC
TCCCTCCTGACCGGCAGCCGGGCTGAGGACGAGGAGGCGACCACGGCCGA
GGTCCGCGAGCTGGTGGCGCGCGTCAACGCGAAGTTCGGACCCGTCATCG
ACTACCAGGAGCTCCGTTCTAACCGGCTTCCCAGGGAGGATCGGATCGCC
CTCTGGCTGGCTTCGGATGTCCTGGTCATCGCCGCCATCCGGGAGGGTCT
GAACCTGCACCCGCTCGAGTTCACTTTTGTCAAGCAGGGCGAAGAGCACC
CTCCCGGCGTGGTCCTTGCCTCCGAGTTCTCTGCCTGCTCCTCCTTGCTC
AATGGGGCCCTGCGCATCAACCCCTTCGACATCAAACGGGTGGTGGTCTC
CTTGGATCACGCCATCCGCTTAGAGCTGCAAGAGCGCCTGAGCCGACGAG
ACCGAGACTTGCCCTACATCTCGGAGCGCCCCTCCTCCCTGTGGACGCGC
CAAGTGCTGCAAGATCTATGGGCCGCCAAGGCGGAGACGCCCGAGCTTCT
TAAAAGGGATACGGGGGGAGTGCGTGTCCAGTACCAGCCCGTCTGGCAAA
CCTCCCACAATCACCTCCGGGAGACGGAGGTGGAGGGCGCCTACAGTAAG
GCGACTCGCAGGTTCATCTTCACGGACTTCGGGGGCACTCTGATGGAGAA
GGAGAAGGTGGATTTGTACATCAAGCGCTCCTTCACCCAGACCACCGGCA
AGCGGCCCTCGCCCTCCGTGATGGAGTCCCTGCGCCTCCTCTCCGCCGAC
CCCAAGAATGAGGTCTTTATCATCAGCGGCCTCCAACTCCTGCCTCTGGA
GGAGGTCTTCGGCCACCTCGACCGCATCGGCCTGGCGGCGGCCAACGGCC
TGTACCTGTCCATGCCACAAGAATCGGACGCAGACAAGGAGTCTCTGTCG
ACCACCCCTCGGTCCGTTCCTCCCGGATCGCACCCTGAGGACGCGAGCGG
CCTTCCCCAGCAGCACAAGGGCAAGAAGCGATCCTGGAGCCTCTTGGACT
ACGGCGTGAAGTGGGCCGAGGTCAAGGACATTGCCTTGCCCATCCTGGAG
CGATACACGGCGCGCACCAACGGGAGCAGCGTCCGCCTCCGGGACCCCGG
GATCGCCTGGAGCTACTACTCGACTGACCCCGAGTGGGGCCTGATGCAGG
CCAAGTCGGTGATCGCCGAGTTGGAGGAGGCCTTGGCCGCGCACGATGTG
AAGGTGGTGCACCTGAAGGGGATGGTGGAGATCGTTCCCAAGCGCTTGAA
CAAGGGCGTGGTCCTCCGGTATGCCATCCAGAGCAAGGAGGGCCCCTCCC
CAGACTTCATCATGTGCATGGGCGACGATGCCAGCGACGAGTATATGTTC
ACCTCGCTGTATTCCTACCTCTCCGAGACCGCCGAGACGGAGCTCGCGCG
CTCTCACAAGGCCTACGACGCAGCCGCGGCCGCAGCTGCCGATGGAAGTG
AGCCTGTTCAGGGGCTGTCACAACGTCGACCCTCGCAGCAGGCGGAGGAA
GAGATTACCAAATACGTGTTCACCTGCTCTGTGGGCAAACATCGATCGCA
TGCCTCGTTCTACGTGCACAATGTGGAGGAGGTGCGCAAACTGTTGGAAG
GATTAGCGGCATTGTCCTCTTGA back to top
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