TPS, gene7801 (gene) Nannochloropsis gaditana

Overview
NameTPS
Unique Namegene7801
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:457652..461443 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100023g46
Gene biotypeprotein_coding
GeneTPS
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:457652..461443 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL062ngnoL062Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01370NO21G01370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8057rna8057-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8057rna8057Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8057

>rna8057-protein ID=rna8057-protein|Name=rna8057|organism=Nannochloropsis gaditana|type=polypeptide|length=840bp
MLTFWVGTVSASDLSEADKQEIRALLEPMRCHPIFMPREMIEGHYHGYCK
KVMWPLFHNVEMLDSCGADWNYKADGRAWDPASVWAVGGKEHWWGTYCQV
NRIFRDVVVEVCKLEEGDVLWVHDYHLMLLPSLVSAHEERVHRHRKCSII
FFLHIPFPTSQIFRALYCGEDLLKGMLSADVIGFHAFDHARHFLNACKRI
LGLSYFNKSGGLIGIELETRTVTVLISHVGIEGSLLTKAMATARVQEETA
ALRHKHKGKLLIAGLDISQRLSGIALKLLAFERLLTEYECYRDRVVMVQR
SLLTGSRAEDEEATTAEVRELVARVNAKFGPVIDYQELRSNRLPREDRIA
LWLASDVLVIAAIREGLNLHPLEFTFVKQGEEHPPGVVLASEFSACSSLL
NGALRINPFDIKRVVVSLDHAIRLELQERLSRRDRDLPYISERPSSLWTR
QVLQDLWAAKAETPELLKRDTGGVRVQYQPVWQTSHNHLRETEVEGAYSK
ATRRFIFTDFGGTLMEKEKVDLYIKRSFTQTTGKRPSPSVMESLRLLSAD
PKNEVFIISGLQLLPLEEVFGHLDRIGLAAANGLYLSMPQESDADKESLS
TTPRSVPPGSHPEDASGLPQQHKGKKRSWSLLDYGVKWAEVKDIALPILE
RYTARTNGSSVRLRDPGIAWSYYSTDPEWGLMQAKSVIAELEEALAAHDV
KVVHLKGMVEIVPKRLNKGVVLRYAIQSKEGPSPDFIMCMGDDASDEYMF
TSLYSYLSETAETELARSHKAYDAAAAAAADGSEPVQGLSQRRPSQQAEE
EITKYVFTCSVGKHRSHASFYVHNVEEVRKLLEGLAALSS
back to top
Synonyms
Publications