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Properties
| Property Name | Value |
|---|
| Product | reticulon 4 interacting protein 1 |
| Orig transcript id | gnl|cribi|Naga_100023g40.3945.mrna |
| Orig protein id | gnl|cribi|Naga_100023g40.3945 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:448260..449438 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8052 ID=rna8052|Name=rna8052|organism=Nannochloropsis gaditana|type=mRNA|length=1476bp
ATGACTGTGTCAAGCTTTTGCTGTAACAGTATCCTCGCCTTCCTCGTCAC
CTACAACATCTTGATGGTCAGTGCCTCTTCATGTCTGATTGCCCTGTGCA
AGACTAGTTTGTCTTCGGTACACCCTTTGTCGAGTTATCACACCCGGGCT
GTTCCTGCGAGTTGGAGGCAATTTTCTTCCTTTGATCCCATGTCAGCTAG
CAGAGCGGGCGGAAGCCGCCCAAAGGTCGTCGTTGTCACGGGCCCCACAG
CCGTGGGAAAATCTAATTTGGCGTTGAGAATCTGTCAAGACTTAGCCCCG
GGCGCACGGGGAGAGATTATCTCGGTGGACTCAGTACAAGTGTACCGGGG
CCTGGACGTCGGATCGAACAAGCCGTCGGAGGCGGAGCGCGCCCGAGTCC
CCCACCACTTGCTGGACGTCCTCGACGCCGACAGCCCCGAGGCCTTCACG
GCGGGCGACTTCGTGCGCAAGGCTGAGGAAGCTATCGACGACGTGCTGGC
AAGAGGGGGAATGCCTGTGGTGGTGGGCGGCACGTCCATGTACACTCAAT
GGCTTGTGCAAGGGCGTCCCGATGCCCCCAAATCGGACCCGGAGATGGAA
CAACGCGCCCGCAAAATGCTGGCACCTTTTCTTGACAAGAAAGATTGGAA
GGGCGGGCTGAGTCTTTTGAAGGCACACAACACCGAGCGGGCGGCTAAAT
TGCACGCGAACGATTGGTACCGCTTGGAAAGGGCGTTGGAGGTGGCCCTC
ACTACGTCTCAAAAAGGCTCTGATCCCGAGGCCGCTGTCCCTCCTTCCCC
CTCCGCCCATTCCTCCTCTTCCTTCACCGGAATCCGCTCTCAGACGCTAT
CCAGAAAATACGATTTTCGCTGTTTCTTCCTCATCGCAGCGCGGGAAGAG
CTCTGCCGTCTCATCGACCGGCGCTGCCTCCAAATGGTGGAGGGGGGCCT
GTTGGAGGAGACTGCGCATTTGCTCGCGGCCGGGACGTTGAATCCCTCCT
CTCCCCCGGGGCGGGCGATTGGATATCGGCAAACCATCGAGTATTTGAGC
AAAGAAGGCATAGAGGGGGAGATGGCAGAGGCCACAGCTCTTCAGGAATT
TTTAGAGGATTTTGCGACCGCCACGCGGCGTTATGCGAAACAGCAGATGG
TCTGGTTCCGCGCCCAGGCCGAGTTCATGTGGCTGCGTTGGAACCTCCAG
GACCTTGGCCCCGTCCTCGACGCCGTGCGTGCTTCTGTGGCCGAAGACGA
GGTCAGTCACCTAGCGAGGCAAGAGGGGAAAGGGCAGAAGGCTTTGCGGG
TAGAAAACATTATGGAGGGCAAGCGCATGAGAAAGTACGTGTCTCGTGTA
AGAGCAGAGTTGACGGAGGACAGGCTCGCGGACTTGGTGAGAAGGGCCCA
GGAATGCCGGAGGCAGGTGCACGAAAGACAAAACTGTCAGCTGAGAGAGG
ATGATTGCTGTATACGCACAAAGTAA back to topprotein sequence of rna8052 >rna8052-protein ID=rna8052-protein|Name=rna8052|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
MPFRVSIQVLCLCLVFTTRSTIPACAFQAASLWRTRHAPLCSVTLGPTGA
GSQEQHDEGNGALVTVVVERVASHTVMPSALAAHGKLLKNTNFQPVKFIP
PSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPGSRIQVPTGVVLPRPES
LSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAI
FAIQVLRAWGCRVVGVSRRNLDALLKAGAEEAIDCRTTSFSERVPEYAAV
VDTVGTDTEGLAANLLRYKKAAYVSTMPSATRRMQAQGLLQAASTFASVF
WGKPDLALTDAHWLPEKLGMDVISYVLRLAEAKHVVLPLAPPSLDDYMDG
VVWAKDSETQARFGFPAPLPEEGLTEAFLSRFQKRMEGEKEQ back to topmRNA from alignment at KK037247.1:448260..449438- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8052 ID=rna8052|Name=rna8052|organism=Nannochloropsis gaditana|type=mRNA|length=1179bp|location=Sequence derived from alignment at KK037247.1:448260..449438- (Nannochloropsis gaditana)
ATGCCTTTCAGGGTCAGCATTCAAGTCCTATGTCTGTGCCTCGTGTTTAC
AACGCGATCAACCATACCTGCCTGCGCCTTCCAAGCTGCAAGTCTATGGC
GAACAAGACACGCACCGCTGTGCTCCGTCACCCTCGGCCCCACCGGCGCG
GGATCCCAAGAGCAACACGATGAAGGCAACGGAGCTCTCGTGACGGTGGT
GGTGGAACGCGTGGCTTCCCACACCGTGATGCCAAGCGCTCTCGCCGCAC
ACGGGAAATTGTTGAAAAACACAAACTTTCAGCCTGTAAAATTCATTCCT
CCCTCGGAGGAGGTCTCTTTCCACGTTGTGGTAGGTCGAAGTCCCGAGCG
AGAGCCTGTGCTCGCCTTCGTGGGCCCTGACATCGCGGCCGGAAAGCCAG
GAAGCAGAATCCAGGTGCCCACCGGGGTGGTTTTGCCTCGGCCAGAATCT
CTGAGCCTCGAGGAGTGTATCCTCTTGCCGTACCACGCCGTCTCCCTCCT
CCCACCACTCATGCGGGCAGGCATTCACGGCGGCGAAGGATCATCCGGCC
CCGCCTCCTCCAAGGTTTGCATCGTCACGGGCTGCGGGCCTGCGGCCATC
TTCGCCATCCAGGTGCTGCGCGCATGGGGCTGCCGCGTGGTGGGTGTCTC
TCGCCGGAACCTGGATGCCCTGCTCAAGGCGGGCGCGGAGGAGGCGATCG
ATTGCCGCACCACCAGCTTCTCCGAGCGGGTCCCCGAGTACGCCGCTGTC
GTGGACACGGTCGGCACGGACACGGAGGGCCTGGCCGCGAACCTGCTCAG
GTACAAGAAGGCTGCCTACGTCTCCACCATGCCCTCCGCCACGCGGCGCA
TGCAGGCCCAGGGCCTCCTCCAGGCCGCCTCCACCTTCGCCTCGGTCTTC
TGGGGAAAGCCGGACCTGGCCCTCACCGACGCGCACTGGCTCCCGGAGAA
ACTGGGGATGGACGTGATCTCCTACGTGCTCAGACTAGCCGAAGCGAAGC
ACGTGGTGCTGCCCTTGGCGCCCCCGTCCCTGGATGACTACATGGACGGG
GTGGTATGGGCCAAGGACTCGGAGACGCAAGCTCGCTTCGGGTTTCCAGC
ACCTTTACCTGAGGAGGGACTGACGGAGGCATTTTTGTCGCGGTTCCAGA
AGCGCATGGAGGGGGAAAAGGAGCAATAG back to topCoding sequence (CDS) from alignment at KK037247.1:448260..449438- >rna8052 ID=rna8052|Name=rna8052|organism=Nannochloropsis gaditana|type=CDS|length=1179bp|location=Sequence derived from alignment at KK037247.1:448260..449438- (Nannochloropsis gaditana)
ATGCCTTTCAGGGTCAGCATTCAAGTCCTATGTCTGTGCCTCGTGTTTAC
AACGCGATCAACCATACCTGCCTGCGCCTTCCAAGCTGCAAGTCTATGGC
GAACAAGACACGCACCGCTGTGCTCCGTCACCCTCGGCCCCACCGGCGCG
GGATCCCAAGAGCAACACGATGAAGGCAACGGAGCTCTCGTGACGGTGGT
GGTGGAACGCGTGGCTTCCCACACCGTGATGCCAAGCGCTCTCGCCGCAC
ACGGGAAATTGTTGAAAAACACAAACTTTCAGCCTGTAAAATTCATTCCT
CCCTCGGAGGAGGTCTCTTTCCACGTTGTGGTAGGTCGAAGTCCCGAGCG
AGAGCCTGTGCTCGCCTTCGTGGGCCCTGACATCGCGGCCGGAAAGCCAG
GAAGCAGAATCCAGGTGCCCACCGGGGTGGTTTTGCCTCGGCCAGAATCT
CTGAGCCTCGAGGAGTGTATCCTCTTGCCGTACCACGCCGTCTCCCTCCT
CCCACCACTCATGCGGGCAGGCATTCACGGCGGCGAAGGATCATCCGGCC
CCGCCTCCTCCAAGGTTTGCATCGTCACGGGCTGCGGGCCTGCGGCCATC
TTCGCCATCCAGGTGCTGCGCGCATGGGGCTGCCGCGTGGTGGGTGTCTC
TCGCCGGAACCTGGATGCCCTGCTCAAGGCGGGCGCGGAGGAGGCGATCG
ATTGCCGCACCACCAGCTTCTCCGAGCGGGTCCCCGAGTACGCCGCTGTC
GTGGACACGGTCGGCACGGACACGGAGGGCCTGGCCGCGAACCTGCTCAG
GTACAAGAAGGCTGCCTACGTCTCCACCATGCCCTCCGCCACGCGGCGCA
TGCAGGCCCAGGGCCTCCTCCAGGCCGCCTCCACCTTCGCCTCGGTCTTC
TGGGGAAAGCCGGACCTGGCCCTCACCGACGCGCACTGGCTCCCGGAGAA
ACTGGGGATGGACGTGATCTCCTACGTGCTCAGACTAGCCGAAGCGAAGC
ACGTGGTGCTGCCCTTGGCGCCCCCGTCCCTGGATGACTACATGGACGGG
GTGGTATGGGCCAAGGACTCGGAGACGCAAGCTCGCTTCGGGTTTCCAGC
ACCTTTACCTGAGGAGGGACTGACGGAGGCATTTTTGTCGCGGTTCCAGA
AGCGCATGGAGGGGGAAAAGGAGCAATAG back to top
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