EWM22629.1, cds8030 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|585103194|gb|EWM22629.1| (reticulon 4 interacting protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0 Query: 1 MPFRVSIQVLCLCLVFTTRSTIPACAFQAASLWRTRHAPLCSVTLGPTGAGSQEQHDEGNGALVTVVVERVASHTVMPSALAAHGKLLKNTNFQPVKFIPPSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPGSRIQVPTGVVLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKAGAEEAIDCRTTSFSERVPEYAAVVDTVGTDTEGLAANLLRYKKAAYVSTMPSATRRMQAQGLLQAASTFASVFWGKPDLALTDAHWLPEKLGMDVISYVLRLAEAKHVVLPLAPPSLDDYMDGVVWAKDSETQARFGFPAPLPEEGLTEAFLSRFQKRMEGEKEQ 392 MPFRVSIQVLCLCLVFTTRSTIPACAFQAASLWRTRHAPLCSVTLGPTGAGSQEQHDEGNGALVTVVVERVASHTVMPSALAAHGKLLKNTNFQPVKFIPPSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPGSRIQVPTGVVLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKAGAEEAIDCRTTSFSERVPEYAAVVDTVGTDTEGLAANLLRYKKAAYVSTMPSATRRMQAQGLLQAASTFASVFWGKPDLALTDAHWLPEKLGMDVISYVLRLAEAKHVVLPLAPPSLDDYMDGVVWAKDSETQARFGFPAPLPEEGLTEAFLSRFQKRMEGEKEQ Sbjct: 1 MPFRVSIQVLCLCLVFTTRSTIPACAFQAASLWRTRHAPLCSVTLGPTGAGSQEQHDEGNGALVTVVVERVASHTVMPSALAAHGKLLKNTNFQPVKFIPPSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPGSRIQVPTGVVLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKAGAEEAIDCRTTSFSERVPEYAAVVDTVGTDTEGLAANLLRYKKAAYVSTMPSATRRMQAQGLLQAASTFASVFWGKPDLALTDAHWLPEKLGMDVISYVLRLAEAKHVVLPLAPPSLDDYMDGVVWAKDSETQARFGFPAPLPEEGLTEAFLSRFQKRMEGEKEQ 392
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|299117596|emb|CBN75438.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 103.605 bits (257), Expect = 1.757e-20 Identity = 79/268 (29.48%), Postives = 126/268 (47.01%), Query Frame = 0 Query: 105 VSFHVVVGRSPEREPVLAFVGPDIAAGKPGSRIQVPTGVVLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKAGAEEAIDCRTTSFSERVPEYAAVVDTVGTDTEGLAANLLRYKKAAYVSTMPSATRRMQAQGLLQAASTFASVFWGKPDLALTDA--HWLPEKLGMDVISYVLRLAEAKHVVLPLAPPS---LDDYMDGVVWAKDSETQARFGFPA 367 V + G + V+ V P G G + V ++ +P+ L ++ +LP+ A+S L PL AG G S A + G G A F + VL+AWG RV + ++ GA+ A+D R S+S+ V +++AVVDT+G + EG L + A YVS PS + GLL + + + +A D+ ++LP + ++S V L A V L + +Y++ + W KD++T RFGFP Sbjct: 95 VLMQTISGVLDDGREVIGVVKPGKYPG--GGSVLVEERHLVDKPQGLGWDKAAMLPFLAISCLWPLSEAGF----GDSMDAGQTFVVTGGHGSLAPFVVAVLKAWGGRVALATTKSEGGARALGADLAVDFRKESYSDVVQDFSAVVDTLGREKEGPQDMLKEARGAEYVSLQPSILKVAVEDGLLFGS---GKILQYQKTVAKDDSRTYFLPNPEAVGLVSQVSALVAAGKVRLGEVGTDYVGMQEYLEALAWPKDTDTGLRFGFPG 353
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|696991968|ref|XP_009563198.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Cuculus canorus]) HSP 1 Score: 75.485 bits (184), Expect = 1.788e-11 Identity = 73/260 (28.08%), Postives = 118/260 (45.38%), Query Frame = 0 Query: 67 VVERVASHTVMP---SALAAHGKLLKNTNFQPVKFIPPSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPG---------------SRIQVPTGV-VLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKA-GAEEAIDCRTTSFSER---VPEYAAVVDTVGTDTEGLAANLL-RYKKAAYVSTMPSATRRMQ----AQGLLQAASTFAS 298 VV +V + ++ P S + +G N P+K SEE F + +GR + V+ G ++ KPG S V +G V +P+SLS E LPY ++ + + G G + + +V I+ G FA+Q+++AWG V V + AL+K GA++ ID ++ + E+ +P + ++D VG TE A NLL ++ A YV+ + M A G+LQ T S Sbjct: 34 VVIKVHAASLNPIDLSMRSGYGATALNMKRDPLKL--KSEETEFPLTLGR--DVSGVVMECGLSVSYFKPGDEVWAAIPPWKQGTLSEFVVASGNEVSFKPKSLSHTEAASLPYVGLTAWSAVHQVG---GLNQNNCSGKRVLILGASGGVGTFAVQLVKAWGAHVTAVCSHDASALMKKLGADDVIDYKSGNLEEQLKALPLFDFILDNVGGSTEKWALNLLKKWSGATYVTLVTPFLINMDKLGVADGMLQTGVTVGS 286
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|676592091|gb|KFO79118.1| (hypothetical protein N303_13521, partial [Cuculus canorus]) HSP 1 Score: 75.0998 bits (183), Expect = 2.332e-11 Identity = 73/261 (27.97%), Postives = 118/261 (45.21%), Query Frame = 0 Query: 67 VVERVASHTVMP---SALAAHGKLLKNTNFQPVKFIPPSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPG----------------SRIQVPTGV-VLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKA-GAEEAIDCRTTSFSER---VPEYAAVVDTVGTDTEGLAANLL-RYKKAAYVSTMPSATRRMQ----AQGLLQAASTFAS 298 VV +V + ++ P S + +G N P+K SEE F + +GR + V+ G ++ KPG S V +G V +P+SLS E LPY ++ + + G G + + +V I+ G FA+Q+++AWG V V + AL+K GA++ ID ++ + E+ +P + ++D VG TE A NLL ++ A YV+ + M A G+LQ T S Sbjct: 26 VVIKVHAASLNPIDLSMRSGYGATALNMKRDPLKL--KSEETEFPLTLGR--DVSGVVMECGLSVSYFKPGDEVVWAAIPPWKQGTLSEFVVASGNEVSFKPKSLSHTEAASLPYVGLTAWSAVHQVG---GLNQNNCSGKRVLILGASGGVGTFAVQLVKAWGAHVTAVCSHDASALMKKLGADDVIDYKSGNLEEQLKALPLFDFILDNVGGSTEKWALNLLKKWSGATYVTLVTPFLINMDKLGVADGMLQTGVTVGS 279
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|1057243195|ref|WP_068613282.1| (hypothetical protein [Woeseia oceani] >gi|1041526289|gb|ANO50518.1| hypothetical protein BA177_04195 [Woeseia oceani]) HSP 1 Score: 73.1738 bits (178), Expect = 1.286e-10 Identity = 64/225 (28.44%), Postives = 101/225 (44.89%), Query Frame = 0 Query: 109 VVVGRSPEREPVLAFVGPDIAAGKPGSRIQ-------------VPTGVVLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGV-SRRNLDALLKAGAEEAIDCRTTSFSERVPEYAAVVDTVGTDTEGLAANLLRYKKAAYVSTMPSATR-RMQAQGLLQAASTFASVFWGKPDLALTDAHWLPEKL 318 +V+GR + V+ VG ++A K G + V + +P +LS E LP+ A++ L+ + G + A KV I G FA+Q+++AWG VVG+ S RN D + GA+E ID FS ++ + DTVG ++ +A+L +T P+ + +L+ S A V P +ALTD H L E + Sbjct: 66 LVLGR--DAAGVIVQVGKNVAGFKCGDEVYAAPHIGCHAEYVAVDASYIAKKPRNLSYLEAASLPFVALTAWTALVD---NAGFSAENAAGKKVVIPRAAGGVGSFAVQLMKAWGAYVVGLCSERNFDFVRALGADEVIDYTKADFSAQLTAFDCAFDTVGRSSDFESADLRG-------ATDPAGEHFDEKLMSMLKRDSGAAYVTVCSPKMALTDRHGLDEGI 278
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|1117363429|ref|XP_019375693.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Gavialis gangeticus]) HSP 1 Score: 73.1738 bits (178), Expect = 1.444e-10 Identity = 71/260 (27.31%), Postives = 118/260 (45.38%), Query Frame = 0 Query: 67 VVERVASHTVMP---SALAAHGKLLKNTNFQPVKFIPPSEEVSFHVVVGRSPEREPVLAFVGPDIAAGKPG---------------SRIQVPTGV-VLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALL-KAGAEEAIDCRTTSFSER---VPEYAAVVDTVGTDTEGLAANLL-RYKKAAYVSTMPSATRRMQ----AQGLLQAASTFAS 298 VV RV + ++ P + + +G N P+K +E F +++GR + V+ G ++ KPG S V +G V +P+SLS E LPY ++ + + G G + A ++ I+ G FAIQ+++AWG V V R+ +L+ K GA++ ID ++ E+ +P + ++D VG TE A N L R+ A YV+ + M A G+LQ T ++ Sbjct: 67 VVIRVHAASLNPIDVNMRSGYGAAALNIRRDPLKIKTTGDE--FPLILGR--DVSGVVMECGLSVSYFKPGDEVWAAIPPWKQGTLSEFVVASGNEVSLKPKSLSHTEAAALPYVGLTAWSAMNQTG---GLNQNNCAGKRILILGASGGVGTFAIQLMKAWGAHVTAVCSRDAKSLVTKLGADDVIDYKSGDTEEQLKLLPLFDFILDNVGGSTEKWALNFLKRWSGATYVTLVTPFLLNMDRLGVADGMLQTGITMST 319
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|557269121|ref|XP_006019879.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Alligator sinensis] >gi|557269123|ref|XP_006019880.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Alligator sinensis]) HSP 1 Score: 72.0182 bits (175), Expect = 3.221e-10 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 0 Query: 147 RPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALL-KAGAEEAIDCRTTSFSER---VPEYAAVVDTVGTDTEGLAANLL-RYKKAAYVSTMPSATRRMQ----AQGLLQAASTFAS 298 +P+SLS E LPY ++ + + G G + A ++ I+ G FAIQ+++AWG V V R+ +L+ K GA++ ID ++ E+ +P + ++D VG TE A N L R+ A YV+ + M A G+LQ T + Sbjct: 160 KPKSLSHTEAAALPYVGLTAWSAMNQIG---GLNQNNCAGKRILILGASGGVGTFAIQLMKAWGAHVTAVCSRDAKSLVTKLGADDVIDYKSGDTEEQLKPLPLFDFILDNVGGSTEKWALNFLKRWSGATYVTLVTPFLLNMDRLGVADGMLQTGITMGT 317
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|731453424|ref|XP_010599642.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X3 [Loxodonta africana]) HSP 1 Score: 70.4774 bits (171), Expect = 4.874e-10 Identity = 48/161 (29.81%), Postives = 79/161 (49.07%), Query Frame = 0 Query: 147 RPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALL-KAGAEEAIDCRTTSFSERV---PEYAAVVDTVGTDTEGLAANLL-RYKKAAYVSTMPSATRRMQ----AQGLLQAASTFAS 298 +P+SL+ + LPY A++ + R G G +V I+ G FAIQV++AWG V V ++ + L+ K GA++ ID ++ + E++ ++ ++D VG TE A N L ++ A YV+ + M A G+LQ T S Sbjct: 69 KPKSLTHTQAASLPYVALTAWSAINRIG---GLNDKNCTGKRVLILGASGGVGTFAIQVVKAWGAHVTAVCSQDANELVRKLGADDTIDYKSGNVEEQLKSMKQFDFILDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGS 226
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|1003762689|ref|XP_015714142.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Coturnix japonica]) HSP 1 Score: 71.2478 bits (173), Expect = 5.638e-10 Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 147 RPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALL-KAGAEEAIDCRTTSFSER---VPEYAAVVDTVGTDTEGLAANLL-RYKKAAYVST----MPSATRRMQAQGLLQAASTFAS 298 +P+ LS E LPY ++ + + G G S + +V I+ G FA+Q+++AWG V V + D L+ K GA++ ID +T + ++ +P + ++D VG TE A +LL ++ A YV+ + + R A G+LQ T S Sbjct: 159 KPKCLSHVEAASLPYVGLTAWSAINKVG---GLNQSNCSGKRVLILGASGGVGTFAVQLVKAWGAHVTAVCSHDADTLMRKLGADDVIDYKTGNLEQQLKALPSFDFILDNVGGSTEKWALDLLKKWSGATYVTLVTPFLINMDRLGVADGMLQTGVTIGS 316
BLAST of EWM22629.1 vs. NCBI_GenBank
Match: gi|1079762118|ref|XP_018550612.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Lates calcarifer]) HSP 1 Score: 71.2478 bits (173), Expect = 6.748e-10 Identity = 55/192 (28.65%), Postives = 91/192 (47.40%), Query Frame = 0 Query: 116 EREPVLAFVGPDIAAGKPGSRIQVPTGVVLPRPESLSLEECILLPYHAVSLLPPLMRAGIHGGEGSSGPASSKVCIVTGCGPAAIFAIQVLRAWGCRVVGVSRRNLDALLKA-GAEEAIDCRTTSFSE---RVPEYAAVVDTVGTDTEGLAANLLR-YKKAAYVST----MPSATRRMQAQGLLQAASTFAS 298 ER+ V A + P G + + V +P+SLS E +PY A + L+ G G + ++ I+ G G FAIQ+L+AWG V +N + ++ GA++ +D E + ++ ++D VG DTE A NLL+ + A YV+ + + R A G++Q A+T A+ Sbjct: 136 ERDEVWAAI-PPWKQGSLAEFVVLSANEVSHKPKSLSHTEAAAIPYVANTAWSALVNTG---GLNKDNCSKKRILILGGSGGVGTFAIQMLKAWGAHVTVTCSQNAERFVRELGADDVVDYTAGPVEEPLSALEKFDLILDNVGGDTERWALNLLKPWSGAKYVTLVTPFLQNTDRLGIADGMMQTAATVAT 323 The following BLAST results are available for this feature:
BLAST of EWM22629.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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