rna8032, rna8032 (mRNA) Nannochloropsis gaditana

Overview
Namerna8032
Unique Namerna8032
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2143
Alignment locationKK037247.1:397293..398252 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100023g19.3940.mrna
Orig protein idgnl|cribi|Naga_100023g19.3940
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:397293..398252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100023g19gene7776Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8032rna8032-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22624.1cds8010Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8032 ID=rna8032|Name=rna8032|organism=Nannochloropsis gaditana|type=mRNA|length=2143bp
GGACTGGCGCGGCCGTGGGTGGGCACTGGAATGAAGAAAGTCTTGATCGG
GCTTGACAGACATACCGTATGCACTTAAAGTCACCGCGCAAACCCCCGGA
TGCTATTCTTTTCGTCTCTCGATCACTCATTTTCTGCGAGATAGTACTGT
GCTGTCATGCAACCTCCTCTTCCTCGGGAGTTTCTCCCTGTATTATTGCA
AAAGCTCCCACGTTTTATACCCATAACTACGTTATCTCGGAGGCTAACTT
ACTTGCTTTCTGTGAAATATGTATGCAGGCGGAGAGGGCTGTGAAATTTG
TTTGCCACATTCGTCACACGATCAAGTGGTCTGGTTGGGGACACCACGAT
GTGTAGAAGCAATGTTTGGCGGATGCCTTTTACATGTGCCCGAGCACAAC
ACCCAGGAGTATTCTCCTCGGCACCAGCATTAATTGTCAAGCGACAAATC
AGTGCACAAGCGCCTCATCATAGGGTTTGTGGAATGGTCATATTGCATCG
CCATGGGGAGCGCGCACCTGTGGTTAATTTTTATGACAACGGTTCGGACG
CTGCCGTCGCTCAGGAGGAGCAAAAACGATGGTTGCGACGCCTCCCAAAT
GAGGAAGATATGGCTTTCCTCAATTTACACTTCCCCATACAATCTGCTGC
AACCCGCATTCCACACGACGTTATAACTCGGCCCTTCGGTTGCTTGACGG
GGAAGGGGCTAGAGAGTATGCGGAATCTCGGGCGCAGTATTAGAAATTTG
CATCCTGAACTTTTGGGTGGTGGCGAAATAAAAAAACACTCGGATACGCC
AAAAAGGAGCGAGTCGGTAAAAATCAAAGTTTTTTCCTCGAACTTCTCTA
GGACTCAGCAAAGCGCGCAAGGGCTGCTTCACGGACTCGGAGCCCAGCAA
GTTGCCCATAGTGGTCAAGTACCGGTTTTTGTCCGAGAAGAAAACGATTG
CACGATTCACATGTACGATAATAAACCCGCTGGTATTCAAGACGAAGTCA
ACAAGGTATTGACTTCCTCTTCCTTTCTTTGCCGCCAAGAAGAACAAGAG
ACCTTGAAGTCCGATCTTGTCAAACTTATCCCCAAATTTACCAAAGAGAA
CTTCAAATGGATGGAAGCAGCAGATTTTTTTTGGTGTTGGCCTGAAGACG
TAGACATGCCAACGAGATTACAAAAACTTCGACGGCCGACGCTTGAATAC
GTAGCTTGGCGATTCAAACAATACTACTCTCACCGCCCATTATTGACTCT
GGTCATTGCCCCCCTTTTGGAGGAAGTCCTGCGTACGCTGCATGGAATGA
GCCATGCGCACTTCGAGCGCAGGGAAAGCAAGGAAAGAAATTTGGATGTC
AATGTGTACAGCGCCCATGACGTGACCCTGTTGGCATTTCTGCACGCTTT
GGATTGGCCTCTCATACACGATCTATCGTGGTGGCCGCCTTTCTGCTCTG
CTATCGTTTTCGAAGTGCTCGAGCCAGTCACTCCTGATCGACAACAAGAA
CATCGGGTTCGTGTTCGTCTCGACATGGTTGATAAAAGTTTTTCATTGTT
TCTACCTGCGGTTAGGAGTCATGCTTTGAATGCAAACATCGCTGATGAGG
ATAATGGTATACCTTTGTCAGAATTACAAGAATGGGTTGACAAGCATGGT
CCTGTGGGCTTGATAATGAATTCTACGAGCCAATCGTGTTGAGAGTGGAT
TCTAACACGTAGCTGACAAATGCAGATTCGATGTGTGTATGTGATTGAAG
GTGTATCGTATAAAGGAAACTCGACTGACTGCTTGTGCTCCGCTTAACAG
AGTTCCCTATCCGCATGTATTGCTCCTTCGATGGACTTAGCTTGCTTTTA
CCTCCGAAATTGCTGTCAATTGCCACCGTCATCTGGCCGCTGTGGCTGCT
CTTCCCGCAAGTCAGTACTGGCACCGTTGATCCAAGAAGACACGAGAGAC
AGAACAGGAAATGGTAAATACATTATATGTTTGTTAGGGTTAGGGCTAAA
AGAGATATGAGCGACGGCGAGGACCTGCATCTTGGCAGCGAAGACGAGAA
TATATGTGTAATATATTAAAGTTTATTGGGGGACGTGGTGCTGGAAGTTT
GGCCAATAACAGACAAGTACAGAACAAAATTTATCGTTAAAGT
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protein sequence of rna8032

>rna8032-protein ID=rna8032-protein|Name=rna8032|organism=Nannochloropsis gaditana|type=polypeptide|length=184bp
MLPPQRLAARPTQLMAPPQTRPRTAVTHEPIEIHGHSRNSATSKGDTIIH
VDCADLQELAFKGEAYDPARPNDYMEFCKERENRAKDEERQREYEKFRKE
REEEMRRGRNTLAGLQSLPSNGDNPMPDSIMPARGRGRGGVSNLPSWMTK
GAPVEDKNRCVDTLSALESGKTQFADAQVSLECY
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mRNA from alignment at KK037247.1:397293..398252+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8032 ID=rna8032|Name=rna8032|organism=Nannochloropsis gaditana|type=mRNA|length=960bp|location=Sequence derived from alignment at KK037247.1:397293..398252+ (Nannochloropsis gaditana)
ATGCTTCCGCCCCAGCGACTAGCAGCACGCCCTACTCAATTGATGGCTCC
ACCACAGACCCGCCCTCGGACTGCCGTCACTCACGAGCCCATAGAGGTAG
GGCTTGTACGCCAGAGAAGTCCACAATTTTCGGCCCTCTAGATATGTTTT
GTTCACTAGTTTATCTATTTACGAACAGATCCATGGCCATAGTAGAAATT
CAGCGACATCTAAAGGGGACACGATTATTCACGTGGATTGCGCAGATTTG
CAAGAATTAGCCTTTAAAGGAGAGGCTTACGATCCAGCCAGACCAAATGA
TTATATGGAGTTTTGCAAGGTATGAGTGAGGATGTCGCTATGGATTTGGG
AGAAAGATCTTTCATCCTTCGTGGAGCATTCTACAGTGATATCTTATTGT
CTGTTAATCAACTTCTGAAGAGAAATTAGCGGCTAGATTCCCGTGCCCAC
TCAGCTTTGCAAAGGGTACTACCGGCTCAAACTTTGGTCATAAAAAGAGG
AAAGTAAATGTACACTGTCTTCTACTGCAGGAGCGTGAAAACAGGGCAAA
GGACGAAGAGCGTCAGAGGGAATATGAAAAGTTTCGAAAGGAAcgcgaag
aagaaatgcgCCGCGGTCGGAATACCCTCGCAGGCCTCCAATCGTTGCCA
AGTAATGGGGACAATCCAATGCCGGATAGTATAATGCCTGCacgcgggcg
tgggcgtggtggTGTAAGCAATTTGCCCTCTTGGATGACCAAGGTAATTG
TTTAAGCCCAAGGATAAAATCTCGTCTGCGTGATGCACGGGATGAAATGT
CCTTTTAACCGGTAAGTCAGCAATTTCTTCCTTATCATAAAAACTTTTTC
GACAGGGTGCGCctgtggaggacaagaatAGGTGCGTTGACACTTTGTCT
GCGCTCGAATCAGGAAAAACTCAATTTGCCGATGCACAAGTAAGTTTGGA
ATGCTACTGA
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Coding sequence (CDS) from alignment at KK037247.1:397293..398252+

>rna8032 ID=rna8032|Name=rna8032|organism=Nannochloropsis gaditana|type=CDS|length=2220bp|location=Sequence derived from alignment at KK037247.1:397293..398252+ (Nannochloropsis gaditana)
ATGCTTCCGCCCCAGCGACTAGCAGCACGCCCTACTCAATTGATGGCTCC
ACCACAGACCCGCCCTCGGACTGCCGTCACTCACGAGCCCATAGAGATCC
ATGGCCATAGTAGAAATTCAGCGACATCTAAAGGGGACACGATTATTCAC
GTGGATTGCGCAGATTTGCAAGAATTAGCCTTTAAAGGAGAGGCTTACGA
TCCAGCCAGACCAAATGATTATATGGAGTTTTGCAAGGAGCGTGAAAACA
GGGCAAAGGACGAAGAGCGTCAGAGGGAATATGAAAAGTTTCGAAAGGAA
cgcgaagaagaaatgcgCCGCGGTCGGAATACCCTCGCAGGCCTCCAATC
GTTGCCAAGTAATGGGGACAATCCAATGCCGGATAGTATAATGCCTGCac
gcgggcgtgggcgtggtggTGTAAGCAATTTGCCCTCTTGGATGACCAAG
GGTGCGCctgtggaggacaagaatAGGTGCGTTGACACTTTGTCTGCGCT
CGAATCAGGAAAAACTCAATTTGCCGATGCACAAGTAAGTTTGGAATGCT
ACTGAATGCTTCCGCCCCAGCGACTAGCAGCACGCCCTACTCAATTGATG
GCTCCACCACAGACCCGCCCTCGGACTGCCGTCACTCACGAGCCCATAGA
GATCCATGGCCATAGTAGAAATTCAGCGACATCTAAAGGGGACACGATTA
TTCACGTGGATTGCGCAGATTTGCAAGAATTAGCCTTTAAAGGAGAGGCT
TACGATCCAGCCAGACCAAATGATTATATGGAGTTTTGCAAGGAGCGTGA
AAACAGGGCAAAGGACGAAGAGCGTCAGAGGGAATATGAAAAGTTTCGAA
AGGAAcgcgaagaagaaatgcgCCGCGGTCGGAATACCCTCGCAGGCCTC
CAATCGTTGCCAAGTAATGGGGACAATCCAATGCCGGATAGTATAATGCC
TGCacgcgggcgtgggcgtggtggTGTAAGCAATTTGCCCTCTTGGATGA
CCAAGGGTGCGCctgtggaggacaagaatAGGTGCGTTGACACTTTGTCT
GCGCTCGAATCAGGAAAAACTCAATTTGCCGATGCACAAGTAAGTTTGGA
ATGCTACTGAATGCTTCCGCCCCAGCGACTAGCAGCACGCCCTACTCAAT
TGATGGCTCCACCACAGACCCGCCCTCGGACTGCCGTCACTCACGAGCCC
ATAGAGATCCATGGCCATAGTAGAAATTCAGCGACATCTAAAGGGGACAC
GATTATTCACGTGGATTGCGCAGATTTGCAAGAATTAGCCTTTAAAGGAG
AGGCTTACGATCCAGCCAGACCAAATGATTATATGGAGTTTTGCAAGGAG
CGTGAAAACAGGGCAAAGGACGAAGAGCGTCAGAGGGAATATGAAAAGTT
TCGAAAGGAAcgcgaagaagaaatgcgCCGCGGTCGGAATACCCTCGCAG
GCCTCCAATCGTTGCCAAGTAATGGGGACAATCCAATGCCGGATAGTATA
ATGCCTGCacgcgggcgtgggcgtggtggTGTAAGCAATTTGCCCTCTTG
GATGACCAAGGGTGCGCctgtggaggacaagaatAGGTGCGTTGACACTT
TGTCTGCGCTCGAATCAGGAAAAACTCAATTTGCCGATGCACAAGTAAGT
TTGGAATGCTACTGAATGCTTCCGCCCCAGCGACTAGCAGCACGCCCTAC
TCAATTGATGGCTCCACCACAGACCCGCCCTCGGACTGCCGTCACTCACG
AGCCCATAGAGATCCATGGCCATAGTAGAAATTCAGCGACATCTAAAGGG
GACACGATTATTCACGTGGATTGCGCAGATTTGCAAGAATTAGCCTTTAA
AGGAGAGGCTTACGATCCAGCCAGACCAAATGATTATATGGAGTTTTGCA
AGGAGCGTGAAAACAGGGCAAAGGACGAAGAGCGTCAGAGGGAATATGAA
AAGTTTCGAAAGGAAcgcgaagaagaaatgcgCCGCGGTCGGAATACCCT
CGCAGGCCTCCAATCGTTGCCAAGTAATGGGGACAATCCAATGCCGGATA
GTATAATGCCTGCacgcgggcgtgggcgtggtggTGTAAGCAATTTGCCC
TCTTGGATGACCAAGGGTGCGCctgtggaggacaagaatAGGTGCGTTGA
CACTTTGTCTGCGCTCGAATCAGGAAAAACTCAATTTGCCGATGCACAAG
TAAGTTTGGAATGCTACTGA
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Synonyms
Publications