EWM22624.1, cds8010 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22624.1 vs. NCBI_GenBank
Match: gi|585103189|gb|EWM22624.1| (hypothetical protein Naga_100023g19 [Nannochloropsis gaditana]) HSP 1 Score: 384.8 bits (987), Expect = 2.411e-135 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 Query: 1 MLPPQRLAARPTQLMAPPQTRPRTAVTHEPIEIHGHSRNSATSKGDTIIHVDCADLQELAFKGEAYDPARPNDYMEFCKERENRAKDEERQREYEKFRKEREEEMRRGRNTLAGLQSLPSNGDNPMPDSIMPARGRGRGGVSNLPSWMTKGAPVEDKNRCVDTLSALESGKTQFADAQVSLECY 184 MLPPQRLAARPTQLMAPPQTRPRTAVTHEPIEIHGHSRNSATSKGDTIIHVDCADLQELAFKGEAYDPARPNDYMEFCKERENRAKDEERQREYEKFRKEREEEMRRGRNTLAGLQSLPSNGDNPMPDSIMPARGRGRGGVSNLPSWMTKGAPVEDKNRCVDTLSALESGKTQFADAQVSLECY Sbjct: 1 MLPPQRLAARPTQLMAPPQTRPRTAVTHEPIEIHGHSRNSATSKGDTIIHVDCADLQELAFKGEAYDPARPNDYMEFCKERENRAKDEERQREYEKFRKEREEEMRRGRNTLAGLQSLPSNGDNPMPDSIMPARGRGRGGVSNLPSWMTKGAPVEDKNRCVDTLSALESGKTQFADAQVSLECY 184
BLAST of EWM22624.1 vs. NCBI_GenBank
Match: gi|1173957967|gb|OQS04399.1| (hypothetical protein THRCLA_03358 [Thraustotheca clavata]) HSP 1 Score: 64.6994 bits (156), Expect = 5.642e-9 Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0 Query: 66 YDPARPNDYMEFCKERENRAKDEERQREYEK----FRKEREEEMRR-GRNTLAGLQSLPSNGDNPMPDSIMPARGRGRGGVSNLPSWMTKGAPVEDKNRCVDTLSALESGKT---QFADA 177 YDP RPNDYM FC+ER+ R K E+ +R+ EK +ERE+E + R+ AG +P+ +P GRGRG NLP+WMTK +E+K + +A +G + QF DA Sbjct: 174 YDPTRPNDYMLFCEERKIRKKQEKVKRDLEKRQERLDREREKEREQLTRDIEAG--RVPTVATTVVPG------GRGRG--MNLPAWMTKK--IEEKTKEQQAATATVAGPSLPGQFEDA 281
BLAST of EWM22624.1 vs. NCBI_GenBank
Match: gi|1173952156|gb|OQR99892.1| (DNA-damage-repair/toleration protein, chloroplastic-like [Achlya hypogyna]) HSP 1 Score: 58.9214 bits (141), Expect = 4.764e-7 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0 Query: 66 YDPARPNDYMEFCKERENRAKDEERQREYEK----FRKEREEEMRR-GRNTLAGLQSLPSNGDNPMPDSIMPARGRGRGGVSNLPSWMTK 150 YDP RPNDYM F +ER+ R K ++ +R+ EK +ERE+E + R+ AG +P+ + +I+P GRGRG NLP+WMTK Sbjct: 189 YDPTRPNDYMTFVEERKIRKKQQKVKRDLEKRQERLDREREKEKQELVRDVAAG--RMPT-----VATTIIPG-GRGRG--VNLPAWMTK 268 The following BLAST results are available for this feature:
BLAST of EWM22624.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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