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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100023g10.3957.mrna |
| Orig protein id | gnl|cribi|Naga_100023g10.3957 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:378034..379378 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8023 ID=rna8023|Name=rna8023|organism=Nannochloropsis gaditana|type=mRNA|length=1142bp
TCACATATGATTTGTAACACATGCTCACACTTTGCACAATATTTTTACCA
ATAGGAAGTTCTGCAAACGACAAGCACGAAAAATTGCAAGTATGAAGGGC
ATGCATTCTTGCCTCAAACGTTCATACACAAAAAATATAATCAACACGAC
ACAACGAGAGACTTACTCACCAAATTACAGGCTTCAATGTTTGTGCAACT
TGCACATGCATGCAGTGCATTCTATTTTATATGATAAATTTCTATGCGTC
ATGCAACGTAGACGGATCTTGGTCTATTGATTGAGAAATAGTATACCATT
CATCAACTTTAAAAGCAGACAGAAGCTGGGCCCCTATGAAGTCAAATTCA
TGCGCTTATATTTGCAGCATGCAAGAATTTATGCACCTTTGCATATTTTA
CACGGACCTGGAGGGGCTAACAAAGAAACATATCCAGGAATGAAACAAGT
GGAGGATGGGCAATCATCGATTTTTGCATTTAAAGGTAGAAGCATTTTTA
TGCTTGAAGCTATGGTATGCAAACCAGACCTTTCAGCCAAACTGTGATAA
TAATCTTTAACAGTCGACAAGTTCAAGTCATTGACATTGTTATATGGCGT
AAGTCAGCCATTCCATAGATAGCAAGAGGTAAATTAATGCACACATTAGA
GAACATGATCAATTCAAATATGCTGTCCGAGAGTCAAAATAATGTACACC
TACAACGAGGAGATTTTCGTCACATCTGCTGAAGCCAAAGACTTGAAGAC
TGAAGGTCAGCCCAAAATATTTCCAGCGGAAATTACTCAAAGCTTTTTGA
AAATACTCAGAATACAGCAAGATGTTACTAGGTTTCCGAGCTCAATGTTC
AGCTTACGAGGACGATTCTTGCTGTTACCATAATTGGCTATTATTTTTTT
CAACTTCTCTAGTCTGCTTAGAGTCATGTAAAATGACATAGAAAAAATTG
CGACCCAAATAAATAAAATGTCACATCGCGGAAAGAATACAAATCAGCAC
ATCTTCTACATCGCATGCTGTGAGTATAATGTAAAACACGTCTATGAAAT
AGACTCTCACACCCCTGTAGTATGACCTAGAATTTATCTGTCAAAAAAAA
AGAAAAATGCACGCAAATTTTCCTGTTCTTGTCTATAATTCA back to topprotein sequence of rna8023 >rna8023-protein ID=rna8023-protein|Name=rna8023|organism=Nannochloropsis gaditana|type=polypeptide|length=336bp
MLSIYGLKNLKYISPGMSDMILYVASVAAMLAFLPMYYALKLHLSLTPAA
VQYDALHNLALSARASTSPGDPLSFIESLSERQSVTRCEWEVMLSSQCRI
TAKESLASSGISKANEKYTLSQRLSLDAYEFAVTADFNDIEGTLERWRRV
VAMRQNRILVPGRTAQIYSQLISVFLRADEFDFLRQVLQYVGLTPDIYLP
RGQLFDLEKLSCRVAKGMLDIDLEQWQWEEHGRALGAPEPLSPREKGENI
AEWLWKQVPPVGGRFELEFMVRDMILSLLRVGFREARERGLSSVVIKLPL
PSKPSSPYFQIHIPRSSLELLRDFDAVSIGLDVNLK back to topmRNA from alignment at KK037247.1:378034..379378+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8023 ID=rna8023|Name=rna8023|organism=Nannochloropsis gaditana|type=mRNA|length=1345bp|location=Sequence derived from alignment at KK037247.1:378034..379378+ (Nannochloropsis gaditana)
CTACCCAATCCTTCGCCCCATCCCACTCTTTGTTTCCCCTATGCGCCCTA
TTTTCCTGGTACATTCGTGTCTGGCTTCTTTATAAGGCTCACATTCATGA
AAGAGGGAATGGCATATTTTTCAGGGCTGGAGGGGATGGCTTCGCTGCGG
CGGCACAGTCCCAGGGCAATTAAAAACTCATTACTTCTTCTAATACGACT
TACGAACTACGTCTTATCCCAATGGATGACTTTtgcaggacaaggaagac
gcAAATTTTTTCCCTTGTACTGAGCGGCTACCTCATAATTTCCGGAAATC
GTTTTGGAGCATGCTATCCATATATGGCTTGAAAAACTTGAAATATATAA
GCCCTGGAATGTCGGACATGATTCTTTATGTCGCTAGTGTCGCTGCAATG
CTCGCTTTCTTGCCCATGTATTATGCTTTGAAGTTACATCTTTCTTTGAC
ACCAGCAGCGGTGCAATACGATGCGCTGCATAACTTGGCCCTTTCTGCTC
GGGCCTCCACATCGCCCGGCGACCCGCTTTCTTTTATCGAAAGCCTGTCT
GAAAGGCAAAGCGTAACTCGTTGCGAATGGGAGGTAATGTTATCCTCTCA
ATGCCGCATTACTGCAAAGGAATCGCTGGCAAGCTCAGGTATCTCCAAAG
CCAATGAGAAATACACTTTATCACAACGCTTGTCTCTAGATGCGTACGAA
TTCGCTGTGACAGCTGATTTCAATGACATTGAAGGAACACTAGAAAGATG
GCGCAGAGTGGTCGCAATGAGGCAAAATCGGATTCTCGTGCCAGGTCGTA
CTGCGCAAATATACTCTCAATTAATCTCAGTCTTTTTGCGAGCCGATGAA
TTTGATTTCCTGCGCCAGGTACTGCAATACGTGGGACTTACGCCGGATAT
TTATTTGCCACGTGGTCAGCTCTTCGATCTGGAAAAATTGTCCTGTCGAG
TCGCCAAAGGTATGCTTGACATCGATTTAGAGCAATGGCAGTGGGAGGAG
CATGGAAGAGCACTGGGCGCGCCCgagcccctttctccacgtGAAAAAGG
CGAGAACATCGCAGAATGGCTATGGAAACAAGTGCCCCCTGTCGGAGGCA
GATTTGAACTAGAATTTATGGTGCGTGACATGATCCTCAGCCTTCTGCGT
GTAGGATTTCGAGAGGCAAGAGAGCGCGGGCTGTCTAGTGTAGTTATTAA
GTTACCGCTCCCCAGTAAACCATCTTCGCCGTATTTCCAGATACATATAC
CCCGCTCTTCCCTTGAGTTGCTGCGAGATTTCGATGCAGTATCCATCGGT
TTGGATGTAAATCTGAAATAGAAATCATTGATTGCAAGTGTCAAG back to topCoding sequence (CDS) from alignment at KK037247.1:378034..379378+ >rna8023 ID=rna8023|Name=rna8023|organism=Nannochloropsis gaditana|type=CDS|length=1011bp|location=Sequence derived from alignment at KK037247.1:378034..379378+ (Nannochloropsis gaditana)
ATGCTATCCATATATGGCTTGAAAAACTTGAAATATATAAGCCCTGGAAT
GTCGGACATGATTCTTTATGTCGCTAGTGTCGCTGCAATGCTCGCTTTCT
TGCCCATGTATTATGCTTTGAAGTTACATCTTTCTTTGACACCAGCAGCG
GTGCAATACGATGCGCTGCATAACTTGGCCCTTTCTGCTCGGGCCTCCAC
ATCGCCCGGCGACCCGCTTTCTTTTATCGAAAGCCTGTCTGAAAGGCAAA
GCGTAACTCGTTGCGAATGGGAGGTAATGTTATCCTCTCAATGCCGCATT
ACTGCAAAGGAATCGCTGGCAAGCTCAGGTATCTCCAAAGCCAATGAGAA
ATACACTTTATCACAACGCTTGTCTCTAGATGCGTACGAATTCGCTGTGA
CAGCTGATTTCAATGACATTGAAGGAACACTAGAAAGATGGCGCAGAGTG
GTCGCAATGAGGCAAAATCGGATTCTCGTGCCAGGTCGTACTGCGCAAAT
ATACTCTCAATTAATCTCAGTCTTTTTGCGAGCCGATGAATTTGATTTCC
TGCGCCAGGTACTGCAATACGTGGGACTTACGCCGGATATTTATTTGCCA
CGTGGTCAGCTCTTCGATCTGGAAAAATTGTCCTGTCGAGTCGCCAAAGG
TATGCTTGACATCGATTTAGAGCAATGGCAGTGGGAGGAGCATGGAAGAG
CACTGGGCGCGCCCgagcccctttctccacgtGAAAAAGGCGAGAACATC
GCAGAATGGCTATGGAAACAAGTGCCCCCTGTCGGAGGCAGATTTGAACT
AGAATTTATGGTGCGTGACATGATCCTCAGCCTTCTGCGTGTAGGATTTC
GAGAGGCAAGAGAGCGCGGGCTGTCTAGTGTAGTTATTAAGTTACCGCTC
CCCAGTAAACCATCTTCGCCGTATTTCCAGATACATATACCCCGCTCTTC
CCTTGAGTTGCTGCGAGATTTCGATGCAGTATCCATCGGTTTGGATGTAA
ATCTGAAATAG back to top
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