rna801, rna801 (mRNA) Nannochloropsis gaditana

Overview
Namerna801
Unique Namerna801
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length657
Alignment locationCM002456.1:449590..449937 +

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Properties
Property NameValue
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100106g15.1444.mrna
Orig protein idgnl|cribi|Naga_100106g15.1444
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:449590..449937 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g15gene767Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna801rna801-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29870.1cds801Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna801 ID=rna801|Name=rna801|organism=Nannochloropsis gaditana|type=mRNA|length=657bp
ATGTGGATCGAGTACAAAAGAGACAGTGCGGACCAACAAAAAGTGATCCC
CCTGGCGGCGTTTCGCGCTTGGCCGGCAATATCTCTCTTCTTCTTGACCC
CATTGAAACGGCTTGGAGGACGTGGAAGAGCAGCGTACAGATGTCTACCT
TGTCTACGACGGTTAGGTACTCCCCCACGTCCAGCACGCCGTTCAAGGGC
CTGGCCCCGCTGGAAGGGGTCGCCAGCCTTCACCCACTCGCTCCTGTCTA
CCACTGCATGGCATGACATGGAGAGTGTGAGTCAATATCAAATACGAAGC
CGGTGGGCTGGCGGGGACACTCCCCCTCACTTCTCCCACTACGCCATCGC
TCCTTCCCCTCCTCCCTCCATCTCTTCATTCACCCTTACCAAGCCGCGTG
TCTGCGCGTGTACGCATCAGCATAAGGTTTTACTTTGTATCCAATATCCC
TGCCCGGGGCAGGCACGTATTTGTACACGGAAGGTAAAGAGTCACAAAGC
AATGGTAGCGTCAGCCATTATCATAAGCATACATAATTTTCAAACGCGTA
CAAACGCTCGCTCGAAGTCGATTAAAGACGCGTGTTGGCTTTGCGCCTTC
ATGCGCCTTGAAGACGCAGAAATGACGCGACAGCGAGACATAAAGTACAG
CATGTAG
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protein sequence of rna801

>rna801-protein ID=rna801-protein|Name=rna801|organism=Nannochloropsis gaditana|type=polypeptide|length=115bp
MKHQANTMMLRIVQALTLLMATTAFFAPHAPSAGIKRGGPVYNGDVEVIW
PGNKKVKAKPGEALKAVAARARYTPNYGCEEGKCGSCEHKGSDGKKYRVC
ITKVPKIAGPLTLKP
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mRNA from alignment at CM002456.1:449590..449937+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna801 ID=rna801|Name=rna801|organism=Nannochloropsis gaditana|type=mRNA|length=348bp|location=Sequence derived from alignment at CM002456.1:449590..449937+ (Nannochloropsis gaditana)
ATGAAGCACCAAGCCAACACGATGATGCTGCGAATCGTCCAGGCCTTAAC
CTTGCTgatggccaccaccgccttcttcgcccctcACGCCCCCTCTGCAG
GCATCAAGCGCGGTGGTCCCGTGTACAACGGGGATGTCGAGGTCATCTGG
CCTGGCAACAAGAAGGTGAAAGCTAAACCGGGGGAGGCCCTGAAGGCTGT
CGCCGCTAGAGCTCGTTACACGCCTAACTACGGATgtgaagaggggaaat
gcGGTTCATGTGAGCACAAAGGTAGCGATGGTAAGAAGTACCGCGTTTGC
ATCACGAAGGTGCCGAAAATCGCCGGCCCATTGACCTTGAAGCCCTAA
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Coding sequence (CDS) from alignment at CM002456.1:449590..449937+

>rna801 ID=rna801|Name=rna801|organism=Nannochloropsis gaditana|type=CDS|length=348bp|location=Sequence derived from alignment at CM002456.1:449590..449937+ (Nannochloropsis gaditana)
ATGAAGCACCAAGCCAACACGATGATGCTGCGAATCGTCCAGGCCTTAAC
CTTGCTgatggccaccaccgccttcttcgcccctcACGCCCCCTCTGCAG
GCATCAAGCGCGGTGGTCCCGTGTACAACGGGGATGTCGAGGTCATCTGG
CCTGGCAACAAGAAGGTGAAAGCTAAACCGGGGGAGGCCCTGAAGGCTGT
CGCCGCTAGAGCTCGTTACACGCCTAACTACGGATgtgaagaggggaaat
gcGGTTCATGTGAGCACAAAGGTAGCGATGGTAAGAAGTACCGCGTTTGC
ATCACGAAGGTGCCGAAAATCGCCGGCCCATTGACCTTGAAGCCCTAA
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Synonyms
Publications